RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 LTBRP36941 435 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 HYAL1Q12794 435 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 LEXMQ3ZCV2 418 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 NAALADL2Q58DX5 795 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
FANCA-220ENST00000566409 PRPF31Q8WWY3 499 aaKnown RBP16.39■□□□□ 0.21
FANCA-220ENST00000566409 SH2B1Q9NRF2 756 aaPredicted RBP16.39■□□□□ 0.21
FANCA-220ENST00000566409 BMP2KQ9NSY1 1161 aaPredicted RBP16.39■□□□□ 0.21
FANCA-220ENST00000566409 A0A087WWV3 80 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 LYPLA2O95372 231 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 MCM7P33993 719 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 CTC1Q2NKJ3 1217 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 XKR9Q5GH70 373 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 CLLU1OSQ5K130 101 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 PABPC5Q96DU9 382 aaKnown RBP16.38■□□□□ 0.21
FANCA-220ENST00000566409 NLRP4Q96MN2 994 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
FANCA-220ENST00000566409 TMEM117Q9H0C3 514 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 FOXP1Q9H334 677 aaPredicted RBP16.38■□□□□ 0.21
FANCA-220ENST00000566409 MINDY3Q9H8M7 445 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 XPNPEP1Q9NQW7 623 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
FANCA-220ENST00000566409 PPME1Q9Y570 386 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 PCDHGC5Q9Y5F6 944 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
FANCA-220ENST00000566409 POTEMA6NI47 508 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 H3BQ06 376 aaPredicted RBP16.37■□□□□ 0.21
FANCA-220ENST00000566409 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
FANCA-220ENST00000566409 SPATA31C1P0DKV0 1188 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 RFC5P40937 340 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
FANCA-220ENST00000566409 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
FANCA-220ENST00000566409 DLX2Q07687 328 aaPredicted RBP16.37■□□□□ 0.21
FANCA-220ENST00000566409 LAMTOR4Q0VGL1 99 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 EMC2Q15006 297 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 SAFBQ15424 915 aaKnown RBP eCLIP16.37■□□□□ 0.21
FANCA-220ENST00000566409 OTUD6AQ7L8S5 288 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 ADGRD2Q7Z7M1 963 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 COLGALT1Q8NBJ5 622 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 POF1BQ8WVV4 589 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 TRAIPQ9BWF2 469 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
FANCA-220ENST00000566409 MEIS3P2A8K0S8 358 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 LINC01565O15544 149 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 SRGAP2CP0DJJ0 459 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 PHKA2P46019 1235 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 RABEP1Q15276 862 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 ZNF174Q15697 407 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 RNF169Q8NCN4 708 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 CD320Q9NPF0 282 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 CLDND1Q9NY35 253 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 PCDHB12Q9Y5F1 795 aa16.36■□□□□ 0.21
FANCA-220ENST00000566409 FGF18O76093 207 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 EOMESO95936 686 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 IL9P15248 144 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
FANCA-220ENST00000566409 PBX3P40426 434 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
FANCA-220ENST00000566409 CATSPER4Q7RTX7 472 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 NOSTRINQ8IVI9 506 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 EXOC8Q8IYI6 725 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 C4orf32Q8N8J7 132 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 HELQQ8TDG4 1101 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 PIGOQ8TEQ8 1089 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
FANCA-220ENST00000566409 LPPQ93052 612 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
FANCA-220ENST00000566409 IGFLR1Q9H665 355 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 ANKEF1Q9NU02 776 aa16.35■□□□□ 0.21
FANCA-220ENST00000566409 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
FANCA-220ENST00000566409 TRIOO75962 3097 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 GRXCR2A6NFK2 248 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 HOXA2O43364 376 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 MED24O75448 989 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 U2AF2P26368 475 aaKnown RBP eCLIP16.34■□□□□ 0.21
FANCA-220ENST00000566409 HOXA11P31270 313 aaPredicted RBP16.34■□□□□ 0.21
FANCA-220ENST00000566409 TECP42680 631 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 RARRES1P49788 294 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
FANCA-220ENST00000566409 ERVFC1P60507 584 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 NBR1Q14596 966 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 LONRF3Q496Y0 759 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 TWF2Q6IBS0 349 aaKnown RBP16.34■□□□□ 0.21
FANCA-220ENST00000566409 PTCRAQ6ISU1 281 aaPredicted RBP16.34■□□□□ 0.21
FANCA-220ENST00000566409 EP400NLQ6ZTU2 488 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 CATSPER3Q86XQ3 398 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 MTRQ99707 1265 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 AAASQ9NRG9 546 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 AGPAT5Q9NUQ2 364 aa16.34■□□□□ 0.21
FANCA-220ENST00000566409 ASAP2O43150 1006 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 NCK2O43639 380 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 GAS2O43903 313 aaKnown RBP16.33■□□□□ 0.2
FANCA-220ENST00000566409 ZNF623O75123 536 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 TBX10O75333 385 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms