RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 JAK3P52333 1124 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 FAM189BP81408 668 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 RBM10P98175 930 aaKnown RBP17.52■□□□□ 0.4
USB1-208ENST00000563207 PPP2R5CQ13362 524 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 TARBP2Q15633 366 aaKnown RBP17.52■□□□□ 0.4
USB1-208ENST00000563207 MTERF2Q49AM1 385 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 LRRC55Q6ZSA7 311 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 MIER3Q7Z3K6 550 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
USB1-208ENST00000563207 POF1BQ8WVV4 589 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 P2RX5Q93086 422 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 LMAN2LQ9H0V9 348 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 NRBP2Q9NSY0 501 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 TYW1Q9NV66 732 aaKnown RBP17.52■□□□□ 0.4
USB1-208ENST00000563207 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 PCDHB6Q9Y5E3 794 aa17.52■□□□□ 0.4
USB1-208ENST00000563207 OR52Z1P0C646 297 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 PBX3P40426 434 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 PRPHP41219 470 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 GPC3P51654 580 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 RBM23Q86U06 439 aaKnown RBP17.51■□□□□ 0.39
USB1-208ENST00000563207 GJD3Q8N144 294 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 FAM167AQ96KS9 214 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 LRFN3Q9BTN0 628 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 CWH43Q9H720 699 aa17.51■□□□□ 0.39
USB1-208ENST00000563207 SEPT9Q9UHD8 586 aaPredicted RBP17.51■□□□□ 0.39
USB1-208ENST00000563207 MAGEB2O15479 319 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 F13A1P00488 732 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 PTGDRQ13258 359 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 ADAM15Q13444 863 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 PLA2G4FQ68DD2 849 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 ATL3Q6DD88 541 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 KSR1Q8IVT5 923 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 CASD1Q96PB1 797 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 TTC12Q9H892 705 aaPredicted RBP17.5■□□□□ 0.39
USB1-208ENST00000563207 C1orf112Q9NSG2 853 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 WRAP73Q9P2S5 460 aaPredicted RBP17.5■□□□□ 0.39
USB1-208ENST00000563207 VAV3Q9UKW4 847 aa17.5■□□□□ 0.39
USB1-208ENST00000563207 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 PER2O15055 1255 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 BRD1O95696 1058 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 EIF4BP23588 611 aaKnown RBP17.49■□□□□ 0.39
USB1-208ENST00000563207 SSTR3P32745 418 aaPredicted RBP17.49■□□□□ 0.39
USB1-208ENST00000563207 TXKP42681 527 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 ERVFC1P60507 584 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 NUCB2P80303 420 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 TBC1D8BQ0IIM8 1120 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 SPOUT1Q5T280 376 aaKnown RBP17.49■□□□□ 0.39
USB1-208ENST00000563207 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
USB1-208ENST00000563207 ANO5Q75V66 913 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 MAP7D2Q96T17 732 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 NIFKQ9BYG3 293 aaKnown RBP17.49■□□□□ 0.39
USB1-208ENST00000563207 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 TMEM161AQ9NX61 479 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 CLEC1BQ9P126 229 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
USB1-208ENST00000563207 ATP6V1DQ9Y5K8 247 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 TRIOO75962 3097 aa17.49■□□□□ 0.39
USB1-208ENST00000563207 PI4K2BG5E9Z4 385 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 MBTPS2O43462 519 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 DKC1O60832 514 aaKnown RBP eCLIP17.48■□□□□ 0.391e-5■■■■□ 25.7
USB1-208ENST00000563207 GLP2RO95838 553 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 DARSP14868 501 aaKnown RBP17.48■□□□□ 0.39
USB1-208ENST00000563207 NRIP1P48552 1158 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
USB1-208ENST00000563207 NPEPPSP55786 919 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 ATP2C1P98194 919 aaPredicted RBP17.48■□□□□ 0.39
USB1-208ENST00000563207 ZP2Q05996 745 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 PDIA5Q14554 519 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 NBR1Q14596 966 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 LONRF3Q496Y0 759 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 CLLU1OSQ5K130 101 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 COLGALT1Q8NBJ5 622 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 RNF169Q8NCN4 708 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 VN1R2Q8NFZ6 395 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
USB1-208ENST00000563207 C1QTNF1Q9BXJ1 281 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 ATP6V0A4Q9HBG4 840 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
USB1-208ENST00000563207 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
USB1-208ENST00000563207 A0A087WZ62 844 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 IGKV6-21A0A0C4DH24 114 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 ZBTB39O15060 712 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 FGF18O76093 207 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 ATF7P17544 494 aaPredicted RBP17.47■□□□□ 0.39
USB1-208ENST00000563207 TMOD1P28289 359 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 DDIT3P35638 169 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 SPIRE1Q08AE8 756 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 EPHA7Q15375 998 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 DTHD1Q6ZMT9 781 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 ECHDC2Q86YB7 292 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 NLRP7Q8WX94 980 aa17.47■□□□□ 0.39
USB1-208ENST00000563207 FDXACB1Q9BRP7 624 aaPredicted RBP17.47■□□□□ 0.39
USB1-208ENST00000563207 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
USB1-208ENST00000563207 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
USB1-208ENST00000563207 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms