RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ALG6Q9Y672 507 aa18.46■□□□□ 0.55
PPP4R3A-208ENST00000555462 DCCP43146 1447 aa18.46■□□□□ 0.55
PPP4R3A-208ENST00000555462 SORBS3O60504 671 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 EXOC3O60645 756 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 RASSF9O75901 435 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 GH1P01241 217 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 FTLP02792 175 aaPredicted RBP18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 DRD4P21917 467 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 SLFN13Q68D06 897 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 CCDC127Q96BQ5 260 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 IQCDQ96DY2 449 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 DYDC2Q96IM9 177 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 FGFR1OP2Q9NVK5 253 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 RABGAP1Q9Y3P9 1069 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 GNA14O95837 355 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 PAX7P23759 505 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 TGFB1I1O43294 461 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 DLATP10515 647 aaKnown RBP18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 TTC27Q6P3X3 843 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 FAM47EQ6ZV65 393 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 CD302Q8IX05 232 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 TATDN2Q93075 761 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 AGAP1Q9UPQ3 857 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 USP20Q9Y2K6 914 aa18.45■□□□□ 0.54
PPP4R3A-208ENST00000555462 SHMT1P34896 483 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 ERFP50548 548 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 IFI16Q16666 785 aaKnown RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 SWT1Q5T5J6 900 aaKnown RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 CCDC197Q8NCU1 140 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 HEMGNQ9BXL5 484 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 PNMA3Q9UL41 463 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 MSH4O15457 936 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 TRIM37O94972 964 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 ODR4Q5SWX8 454 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 SYN2Q92777 582 aaPredicted RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 EIF2AK1Q9BQI3 630 aaKnown RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 EDEM3Q9BZQ6 932 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 MEIS2O14770 477 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 CALUO43852 315 aaPredicted RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 SSR1P43307 286 aaKnown RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 PHLDB3Q6NSJ2 640 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 DPY19L2P1Q6NXN4 242 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 ZNF622Q969S3 477 aaKnown RBP eCLIP18.44■□□□□ 0.542e-7■■■□□ 14.7
PPP4R3A-208ENST00000555462 ERP44Q9BS26 406 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 TRIM7Q9C029 511 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 CEP83Q9Y592 693 aa18.44■□□□□ 0.54
PPP4R3A-208ENST00000555462 SPOPO43791 374 aa18.43■□□□□ 0.54
PPP4R3A-208ENST00000555462 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
PPP4R3A-208ENST00000555462 NEK9Q8TD19 979 aa18.43■□□□□ 0.54
PPP4R3A-208ENST00000555462 NGLY1Q96IV0 654 aa18.43■□□□□ 0.54
PPP4R3A-208ENST00000555462 PRR5LQ6MZQ0 368 aa18.43■□□□□ 0.54
PPP4R3A-208ENST00000555462 SGSM3Q96HU1 749 aa18.43■□□□□ 0.54
PPP4R3A-208ENST00000555462 TCP11X1B4DZS4 312 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 PYGMP11217 842 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 SOX5P35711 763 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 PEX19P40855 299 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 KIAA1755Q5JYT7 1200 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 NUGGCQ68CJ6 796 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 CCDC63Q8NA47 563 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 TBC1D16Q8TBP0 767 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 LMBR1Q8WVP7 490 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 EPB41L4BQ9H329 900 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 KDM3AQ9Y4C1 1321 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 ESYT2A0FGR8 921 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 UBOX5O94941 541 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 ZFYVE27Q5T4F4 411 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 CCDC137Q6PK04 289 aaKnown RBP18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 ARHGEF19Q8IW93 802 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 PPM1KQ8N3J5 372 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 FAM167BQ9BTA0 163 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 ARAP2Q8WZ64 1704 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 DDX3YO15523 660 aaKnown RBP18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 COMTP21964 271 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 YY1P25490 414 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 ELF1P32519 619 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 FMO5P49326 533 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 COBLL1Q53SF7 1204 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 RINT1Q6NUQ1 792 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 FAM178BQ8IXR5 827 aa18.42■□□□□ 0.54
PPP4R3A-208ENST00000555462 GOLGA6L10A0A0M3HER8 536 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 CLDN3O15551 220 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 NEBLO76041 1014 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 BIRC3Q13489 604 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 RPUSD2Q8IZ73 545 aaKnown RBP18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 HES6Q96HZ4 224 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 INTS2Q9H0H0 1204 aaKnown RBP18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 NOD2Q9HC29 1040 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 WRAP73Q9P2S5 460 aaPredicted RBP18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 MAP2K1Q02750 393 aaPredicted RBP18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 NEDD9Q14511 834 aa18.41■□□□□ 0.54
PPP4R3A-208ENST00000555462 FRMD5Q7Z6J6 570 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms