RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PCDHA11Q9Y5I1 949 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 CHD7Q9P2D1 2997 aa21.24■□□□□ 0.99
DDX55-211ENST00000544429 PLCG1P19174 1290 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 PBX2P40425 430 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 PTENP60484 403 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 NFX1Q12986 1120 aaKnown RBP21.23■□□□□ 0.99
DDX55-211ENST00000544429 CAPSQ13938 189 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 KARSQ15046 597 aaKnown RBP21.23■□□□□ 0.99
DDX55-211ENST00000544429 RINT1Q6NUQ1 792 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 SRGAP1Q7Z6B7 1085 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 DAW1Q8N136 415 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 KCNG4Q8TDN1 519 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 CALML4Q96GE6 196 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 POLR3FQ9H1D9 316 aaPredicted RBP21.23■□□□□ 0.99
DDX55-211ENST00000544429 MINDY3Q9H8M7 445 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 CFAP45Q9UL16 551 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 YBX2Q9Y2T7 364 aaKnown RBP21.23■□□□□ 0.99
DDX55-211ENST00000544429 MYH11P35749 1972 aa21.23■□□□□ 0.99
DDX55-211ENST00000544429 CSDE1O75534 798 aaKnown RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 AMHP03971 560 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 SRGAP2CP0DJJ0 459 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 GUCY2CP25092 1073 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 DNAJB2P25686 324 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 HTRA4P83105 476 aaPredicted RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 MAPK7Q13164 816 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 FOXD4L6Q3SYB3 417 aaPredicted RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 FOXD4L3Q6VB84 417 aaPredicted RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 TMCO2Q7Z6W1 182 aaPredicted RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 RNF149Q8NC42 400 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 CDK5RAP3Q96JB5 506 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 PLIN2Q99541 437 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 RUSC1Q9BVN2 902 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 INO80BQ9C086 356 aaPredicted RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 RGS18Q9NS28 235 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 KCND2Q9NZV8 630 aa21.22■□□□□ 0.99
DDX55-211ENST00000544429 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
DDX55-211ENST00000544429 TMEM265A0A087WTH1 108 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 PLA2G4BP0C869 781 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 RABGGTBP53611 331 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 ZRSR1Q15695 479 aaKnown RBP21.21■□□□□ 0.99
DDX55-211ENST00000544429 RAB30Q15771 203 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 NAALADL2Q58DX5 795 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 CDCA2Q69YH5 1023 aaPredicted RBP21.21■□□□□ 0.99
DDX55-211ENST00000544429 BSNDQ8WZ55 320 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 SCLT1Q96NL6 688 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 TIPINQ9BVW5 301 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 TRAIPQ9BWF2 469 aa21.21■□□□□ 0.99
DDX55-211ENST00000544429 C9IYK1 514 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 CUTAO60888 179 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 FGFR4P22455 802 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 SFPQP23246 707 aaKnown RBP eCLIP21.2■□□□□ 0.98
DDX55-211ENST00000544429 NUCB2P80303 420 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 FAM189BP81408 668 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 TFDP1Q14186 410 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 PCBP1Q15365 356 aaKnown RBP eCLIP21.2■□□□□ 0.98
DDX55-211ENST00000544429 ARSHQ5FYA8 562 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 FAM102BQ5T8I3 360 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 MAEAQ7L5Y9 396 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 MYOCDQ8IZQ8 938 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 RAD54LQ92698 747 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 KIFAP3Q92845 792 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 CHAMP1Q96JM3 812 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 ADAM2Q99965 735 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 RC3H2Q9HBD1 1191 aaKnown RBP21.2■□□□□ 0.98
DDX55-211ENST00000544429 CHST12Q9NRB3 414 aa21.2■□□□□ 0.98
DDX55-211ENST00000544429 A0A087X0B3 334 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 MYOGP15173 224 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 PHKA2P46019 1235 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 SHC4Q6S5L8 630 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 SLC24A5Q71RS6 500 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 SP7Q8TDD2 431 aaPredicted RBP21.19■□□□□ 0.98
DDX55-211ENST00000544429 TIFAQ96CG3 184 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 RAD9AQ99638 391 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 C1orf112Q9NSG2 853 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 AGPAT5Q9NUQ2 364 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 STK17AQ9UEE5 414 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 PCDHA7Q9UN72 937 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 ATP6V1DQ9Y5K8 247 aa21.19■□□□□ 0.98
DDX55-211ENST00000544429 FNDC1Q4ZHG4 1894 aaPredicted RBP21.18■□□□□ 0.98
DDX55-211ENST00000544429 HIP1RO75146 1068 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 HOXA11P31270 313 aaPredicted RBP21.18■□□□□ 0.98
DDX55-211ENST00000544429 NAMPTP43490 491 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 SARSP49591 514 aaKnown RBP21.18■□□□□ 0.98
DDX55-211ENST00000544429 KRT85P78386 507 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 MBTD1Q05BQ5 628 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 AMHR2Q16671 573 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 LEO1Q8WVC0 666 aaPredicted RBP21.18■□□□□ 0.98
DDX55-211ENST00000544429 TTYH1Q9H313 450 aaPredicted RBP21.18■□□□□ 0.98
DDX55-211ENST00000544429 CCDC39Q9UFE4 941 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 MSRAQ9UJ68 235 aa21.18■□□□□ 0.98
DDX55-211ENST00000544429 TLL1O43897 1013 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 ARHGEF15O94989 841 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 TXLNAP40222 546 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 NPAS4Q8IUM7 802 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 LARP4BQ92615 738 aaKnown RBP21.17■□□□□ 0.98
DDX55-211ENST00000544429 ZNF689Q96CS4 500 aaPredicted RBP21.17■□□□□ 0.98
DDX55-211ENST00000544429 CCDC113Q9H0I3 377 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 ELAC1Q9H777 363 aaKnown RBP21.17■□□□□ 0.98
DDX55-211ENST00000544429 C17orf75Q9HAS0 396 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 POLD4Q9HCU8 107 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms