RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 EXOC2Q96KP1 924 aa6.65□□□□□ -1.34
GCSHP4-201ENST00000538792 ZFYVE21Q9BQ24 234 aa6.65□□□□□ -1.34
GCSHP4-201ENST00000538792 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
GCSHP4-201ENST00000538792 SNTG2Q9NY99 539 aa6.65□□□□□ -1.34
GCSHP4-201ENST00000538792 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.34
GCSHP4-201ENST00000538792 DLG5Q8TDM6 1919 aa6.65□□□□□ -1.34
GCSHP4-201ENST00000538792 NCANO14594 1321 aa6.65□□□□□ -1.35
GCSHP4-201ENST00000538792 MAP3K5Q99683 1374 aa6.65□□□□□ -1.35
GCSHP4-201ENST00000538792 CICQ96RK0 1608 aaPredicted RBP6.65□□□□□ -1.35
GCSHP4-201ENST00000538792 TRBV23-1A0A0A0MS06 115 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 KRIT1O00522 736 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 NKRFO15226 690 aaKnown RBP eCLIP6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 LTFP02788 710 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 SOD2P04179 222 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 RPL13P26373 211 aaKnown RBP6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 CRKLP46109 303 aaKnown RBP6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 TTLL7Q6ZT98 887 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 MCM10Q7L590 875 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 SCUBE1Q8IWY4 988 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 TTLL6Q8N841 843 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 PHOSPHO1Q8TCT1 267 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 ZSWIM3Q96MP5 696 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 TEPSINQ96N21 525 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 DEPDC7Q96QD5 511 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 CDC6Q99741 560 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 IPPKQ9H8X2 491 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 PCDH18Q9HCL0 1135 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 TELO2Q9Y4R8 837 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 C4AP0C0L4 1744 aa6.64□□□□□ -1.35
GCSHP4-201ENST00000538792 PRAMEF22A3QJZ6 481 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 RPS6KA4O75676 772 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 CYP19A1P11511 503 aaPredicted RBP6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 BUD31P41223 144 aaPredicted RBP6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 GRIN1Q05586 938 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 CYP4F22Q6NT55 531 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 PROSER1Q86XN7 944 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 KDM2BQ8NHM5 1336 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 CXorf38Q8TB03 319 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 ZNF496Q96IT1 587 aaPredicted RBP6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 CFAP53Q96M91 514 aa6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 PRKRIP1Q9H875 184 aaPredicted RBP6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 NGRNQ9NPE2 291 aaKnown RBP6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 SRP68Q9UHB9 627 aaKnown RBP6.63□□□□□ -1.35
GCSHP4-201ENST00000538792 GNAT1P11488 350 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 GYS1P13807 737 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 TUSC3Q13454 348 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 RALBP1Q15311 655 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 SKOR2Q2VWA4 1001 aaPredicted RBP6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 TMC5Q6UXY8 1006 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 FERMT3Q86UX7 667 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 UHMK1Q8TAS1 419 aaKnown RBP6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 DDX1Q92499 740 aaKnown RBP6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 THUMPD2Q9BTF0 503 aaKnown RBP6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 LNPKQ9C0E8 428 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 USP40Q9NVE5 1235 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 MIS18AQ9NYP9 233 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 NUDCQ9Y266 331 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 ZBTB1Q9Y2K1 713 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 KIAA1551Q9HCM1 1747 aa6.62□□□□□ -1.35
GCSHP4-201ENST00000538792 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 MYBBP1AQ9BQG0 1328 aaKnown RBP6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 TCRBV5S4A2TA0A5A2 114 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 DDX3XO00571 662 aaKnown RBP eCLIP6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 MAFKO60675 156 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 SYN1P17600 705 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 GJA9P57773 515 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 MCTP2Q6DN12 878 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 ZNF790Q6PG37 636 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 TTLL11Q8NHH1 800 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 DNAJC7Q99615 494 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 HSPBP1Q9NZL4 362 aa6.61□□□□□ -1.35
GCSHP4-201ENST00000538792 HEG1Q9ULI3 1381 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 FAM47E-STBD1D6RA91 191 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 A1BGP04217 495 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 ZNF28P17035 718 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 POLD1P28340 1107 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 MLLT6P55198 1093 aaPredicted RBP6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 DDR1Q08345 913 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 SPIRE1Q08AE8 756 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 NFE2L2Q16236 605 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 ZFYVE27Q5T4F4 411 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 PHF19Q5T6S3 580 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 LRP10Q7Z4F1 713 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 TRIM48Q8IWZ4 208 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 CCDC146Q8IYE0 955 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 SH3RF2Q8TEC5 729 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 KISS1RQ969F8 398 aaPredicted RBP6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 SRPK1Q96SB4 655 aaKnown RBP6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 ALG1Q9BT22 464 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 DHRS4Q9BTZ2 278 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 MRPS23Q9Y3D9 190 aaKnown RBP6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 PCDHA8Q9Y5H6 950 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 USP16Q9Y5T5 823 aa6.6□□□□□ -1.35
GCSHP4-201ENST00000538792 USP42Q9H9J4 1324 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms