RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 RPGRIP1LQ68CZ1 1315 aa4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 WDR33Q9C0J8 1336 aaKnown RBP4.35□□□□□ -1.71
HMGB3P15-201ENST00000507326 E2F8A0AVK6 867 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 FAM170AA1A519 330 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 PRAMEF25A6NGN4 478 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 TSPAN6O43657 245 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 AMY2AP04746 511 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 AMY2BP19961 511 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 ACRV1P26436 265 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 MSX2P35548 267 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 DDIT3P35638 169 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 MASP1P48740 699 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 INHBEP58166 350 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 FOXL1Q12952 345 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 SERINC3Q13530 473 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 NFYCQ13952 458 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 TCEA2Q15560 299 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 SMN1Q16637 294 aaKnown RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 FAM133BQ5BKY9 247 aaKnown RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 CC2D1AQ6P1N0 951 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 EP400NLQ6ZTU2 488 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 GET4Q7L5D6 327 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 KRT26Q7Z3Y9 468 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 OSTM1Q86WC4 334 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 ZNF354CQ86Y25 554 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 MYO1HQ8N1T3 1032 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 CACTINQ8WUQ7 758 aaKnown RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 CHAC2Q8WUX2 184 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 NEU4Q8WWR8 484 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 CFHR4Q92496 578 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 ANP32BQ92688 251 aaKnown RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 TTC14Q96N46 770 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 SCLT1Q96NL6 688 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 TSPAN18Q96SJ8 248 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 ARPC5LQ9BPX5 153 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 IKZF4Q9H2S9 585 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 TLR9Q9NR96 1032 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 GALNT8Q9NY28 637 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 PUF60Q9UHX1 559 aaKnown RBP4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 NRBP1Q9UHY1 535 aa4.34□□□□□ -1.71
HMGB3P15-201ENST00000507326 GOLGA6L6A8MZA4 724 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 AQP7O14520 342 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 KCNK3O14649 394 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 DHX16O60231 1041 aaKnown RBP4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 ALDH1L1O75891 902 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 SRGAP2CP0DJJ0 459 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 PYGMP11217 842 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 PDE6AP16499 860 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 HIBADHP31937 336 aaKnown RBP4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 GJA4P35212 333 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 SOX5P35711 763 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 JAM2P57087 298 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 DPTQ07507 201 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 MORC3Q14149 939 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 PCOLCEQ15113 449 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 NFE2Q16621 373 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 TMEM95Q3KNT9 176 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 CCDC92Q53HC0 331 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 FIGNQ5HY92 759 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 KSR2Q6VAB6 950 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 USP30Q70CQ3 517 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 OTOP2Q7RTS6 562 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 KIAA0907Q7Z7F0 614 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 AMER2Q8N7J2 671 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 ENAHQ8N8S7 591 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 MYRIPQ8NFW9 859 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 PCDH19Q8TAB3 1148 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 TRIM63Q969Q1 353 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 FBXW5Q969U6 566 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 SNTG2Q9NY99 539 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 PLA2G3Q9NZ20 509 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 ABCF2Q9UG63 623 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 FBXO10Q9UK96 956 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 CBLCQ9ULV8 474 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 ATP8A1Q9Y2Q0 1164 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 PCDHA8Q9Y5H6 950 aa4.33□□□□□ -1.72
HMGB3P15-201ENST00000507326 RASGRP1O95267 797 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 C4BPAP04003 597 aaKnown RBP4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 AOAHP28039 575 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 MRE11P49959 708 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 GUCY1A3Q02108 690 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 PICALMQ13492 652 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 TUBA3CQ13748 450 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 RAB33AQ14088 237 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 EIF4HQ15056 248 aaKnown RBP4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 CDC37Q16543 378 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 TUBA3EQ6PEY2 450 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 LRSAM1Q6UWE0 723 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 CXXC5Q7LFL8 322 aaKnown RBP4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 MAMDC2Q7Z304 686 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 RTKN2Q8IZC4 609 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 OR14K1Q8NGZ2 314 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 WNK4Q96J92 1243 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 SELENOOQ9BVL4 669 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 MMRN2Q9H8L6 949 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 AS3MTQ9HBK9 375 aa4.32□□□□□ -1.72
HMGB3P15-201ENST00000507326 BTBD7Q9P203 1132 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 1097.6 ms