RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	NONO	Q15233	471 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CWF19L1	Q69YN2	538 aa	Known RBP	18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SLC22A17	Q8WUG5	538 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	EMILIN2	Q9BXX0	1053 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CHST12	Q9NRB3	414 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	IGSF9	Q9P2J2	1179 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	GABBR1	Q9UBS5	961 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SAMM50	Q9Y512	469 aa		18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318		V9GY48	417 aa	Predicted RBP	18.75	■□□□□ 0.59
SUPT20H-223	ENST00000497318	FAM86B1	E9PN63	330 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	LMNA	P02545	664 aa	Known RBP	18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CYP3A4	P08684	503 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	FAM86B2	P0C5J1	330 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	RNASEL	Q05823	741 aa	Known RBP	18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	KANK3	Q6NY19	840 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	GLB1L	Q6UWU2	654 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	GPR149	Q86SP6	731 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SGMS1	Q86VZ5	419 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	SIX5	Q8N196	739 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	NLRP7	Q8WX94	980 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	IGSF21	Q96ID5	467 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	BARHL2	Q9NY43	387 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DUSP12	Q9UNI6	340 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DMD	P11532	3685 aa		18.74	■□□□□ 0.59
SUPT20H-223	ENST00000497318	PI15	O43692	258 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	NPR3	P17342	541 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	IRX6	P78412	446 aa	Predicted RBP	18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	TYW1B	Q6NUM6	668 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	ELMSAN1	Q6PJG2	1045 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	LRRC71	Q8N4P6	559 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	AUTS2	Q8WXX7	1259 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	KCNK12	Q9HB15	430 aa		18.73	■□□□□ 0.59
SUPT20H-223	ENST00000497318	IGLV3-22	A0A075B6J6	115 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	KLRC2	P26717	231 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CLK2	P49760	499 aa	Known RBP	18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	GPC3	P51654	580 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	JAKMIP3	Q5VZ66	844 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	LINC01465	Q8N7H1	131 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	WNT16	Q9UBV4	365 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	CNTNAP5	Q8WYK1	1306 aa		18.72	■□□□□ 0.59
SUPT20H-223	ENST00000497318	WDR64	B1ANS9	1081 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	OAT	P04181	439 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	PHKA2	P46019	1235 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DNM2	P50570	870 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	TBC1D8B	Q0IIM8	1120 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	RTN1	Q16799	776 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	LETM2	Q2VYF4	491 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	NOMO2	Q5JPE7	1267 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	C15orf39	Q6ZRI6	1047 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DGLUCY	Q7Z3D6	616 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	TRAIP	Q9BWF2	469 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	LRRC2	Q9BYS8	371 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	INO80B	Q9C086	356 aa	Predicted RBP	18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	DPP7	Q9UHL4	492 aa		18.71	■□□□□ 0.59
SUPT20H-223	ENST00000497318	ZBTB43	O43298	467 aa		18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	GALT	P07902	379 aa		18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	SFPQ	P23246	707 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	TWF2	Q6IBS0	349 aa	Known RBP	18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	ZC3H14	Q6PJT7	736 aa	Known RBP	18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	APOA5	Q6Q788	366 aa		18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	STAM	Q92783	540 aa		18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	ZNF668	Q96K58	619 aa	Predicted RBP	18.7	■□□□□ 0.58
SUPT20H-223	ENST00000497318	SLC27A2	O14975	620 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	FGFR4	P22455	802 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	RAB27A	P51159	221 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	PTPN14	Q15678	1187 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	PRR16	Q569H4	304 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	CYP26C1	Q6V0L0	522 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	TMEM173	Q86WV6	379 aa	Predicted RBP	18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	NXPE3	Q969Y0	559 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	PGBD4	Q96DM1	585 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	NRDE2	Q9H7Z3	1164 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	C6orf50	Q9HD87	102 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	DISC1	Q9NRI5	854 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	TBC1D13	Q9NVG8	400 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	INPP5F	Q9Y2H2	1132 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	EVPL	Q92817	2033 aa		18.69	■□□□□ 0.58
SUPT20H-223	ENST00000497318	PRKCE	Q02156	737 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	FUT2	Q10981	343 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	PUM1	Q14671	1186 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	CREB3L3	Q68CJ9	461 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	REXO1	Q8N1G1	1221 aa	Known RBP	18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	URGCP	Q8TCY9	931 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	CRYGN	Q8WXF5	182 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	RMDN1	Q96DB5	314 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	KLHL5	Q96PQ7	755 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	HINFP	Q9BQA5	517 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	GBP3	Q9H0R5	595 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	MRPL17	Q9NRX2	175 aa	Known RBP	18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	SSX2IP	Q9Y2D8	614 aa		18.68	■□□□□ 0.58
SUPT20H-223	ENST00000497318	ZNF623	O75123	536 aa		18.67	■□□□□ 0.58
SUPT20H-223	ENST00000497318	ALDH2	P05091	517 aa		18.67	■□□□□ 0.58
SUPT20H-223	ENST00000497318	SFN	P31947	248 aa		18.67	■□□□□ 0.58
SUPT20H-223	ENST00000497318	GBP2	P32456	591 aa	Predicted RBP	18.67	■□□□□ 0.58
SUPT20H-223	ENST00000497318	CLCN4	P51793	760 aa		18.67	■□□□□ 0.58
SUPT20H-223	ENST00000497318	RNF20	Q5VTR2	975 aa		18.67	■□□□□ 0.58
SUPT20H-223	ENST00000497318	KIAA2013	Q8IYS2	634 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms