RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SCN3BQ9NY72 215 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ZNF229Q9UJW7 825 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 TRAF3IP3Q9Y228 551 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 RTL1A6NKG5 1358 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 IBTKQ9P2D0 1353 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 ZNF839A8K0R7 811 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PI4K2BG5E9Z4 385 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 DDX3XO00571 662 aaKnown RBP eCLIP5.76□□□□□ -1.49
USF3-202ENST00000478658 XPO1O14980 1071 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 ECM2O94769 699 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 HIST1H2AGP0C0S8 130 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 HIST1H2ADP20671 130 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MAGEA10P43363 369 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 BTN3A2P78410 334 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 VEPH1Q14D04 833 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ZNF174Q15697 407 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 HIST2H2AA3Q6FI13 130 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CENPUQ71F23 418 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 KANSL1Q7Z3B3 1105 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 TBC1D1Q86TI0 1168 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 CHD1LQ86WJ1 897 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PI4K2BQ8TCG2 481 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 GAPVD1Q14C86 1478 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SPDYE5A6NIY4 337 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PDHA1P08559 390 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 NCF2P19878 526 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 HMOX2P30519 316 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 DDIT3P35638 169 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 VBP1P61758 197 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 RAPGEF1Q13905 1077 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 SPDYE7PQ495Y7 208 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 SFMBT2Q5VUG0 894 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 EXOC3L1Q86VI1 746 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PHB2Q99623 299 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ADCY6O43306 1168 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 EGFRP00533 1210 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 POMCP01189 267 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 IFNGR2P38484 337 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 STAT1P42224 750 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 FAM81AQ8TBF8 368 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 SSH3Q8TE77 659 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ITCHQ96J02 903 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 CAMKK2Q96RR4 588 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 KRT84Q9NSB2 600 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 BSDC1Q9NW68 430 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 AATFQ9NY61 560 aaKnown RBP eCLIP5.75□□□□□ -1.49
USF3-202ENST00000478658 WHRNQ9P202 907 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ANAPC7Q9UJX3 599 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 EDARQ9UNE0 448 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TCHHQ07283 1943 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 LRRC53A6NM62 1247 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PRPF4O43172 522 aaKnown RBP eCLIP5.75□□□□□ -1.49
USF3-202ENST00000478658 ALDH6A1Q02252 535 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CNTN1Q12860 1018 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 SLC29A2Q14542 456 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 CCDC85BQ15834 202 aaPredicted RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 EDRF1Q3B7T1 1238 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 DGKKQ5KSL6 1271 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ANO7Q6IWH7 933 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TYW1BQ6NUM6 668 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 KRT25Q7Z3Z0 450 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ICA1LQ8NDH6 482 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 CCDC54Q8NEL0 328 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 MAML3Q96JK9 1138 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 BBS4Q96RK4 519 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TSC22D3Q99576 134 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ASPNQ9BXN1 380 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 MAPRE3Q9UPY8 281 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 WDR91A4D1P6 747 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ZBED1O96006 694 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PCP11498 1178 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CLK3P49761 638 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 TCEA2Q15560 299 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 WASHC2DQ5SRD0 308 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 DYMQ7RTS9 669 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 KLHL7Q8IXQ5 586 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 UBXN6Q9BZV1 441 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 LRRC40Q9H9A6 602 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 RAB23Q9ULC3 237 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 COQ6Q9Y2Z9 468 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 A0A0X1KG70 313 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 CFAP99D6REC4 459 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 G3V2T6 193 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 MAPK13O15264 365 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 HOXB6P17509 224 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 GUCY2CP25092 1073 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ALDH1B1P30837 517 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 BCAR1P56945 870 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 ST8SIA6P61647 398 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 YWHAZP63104 245 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 CBX3Q13185 183 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 BRD3Q15059 726 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 LRRC8DQ7L1W4 858 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 PEX5LQ8IYB4 626 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 SERPINB12Q96P63 405 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 TRIM51Q9BSJ1 452 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 NOC4LQ9BVI4 516 aaKnown RBP5.75□□□□□ -1.49
USF3-202ENST00000478658 SLC26A6Q9BXS9 759 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 HAUS4Q9H6D7 363 aa5.75□□□□□ -1.49
USF3-202ENST00000478658 NPHS2Q9NP85 383 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms