RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
PRKD3-208ENST00000475912 FNTBP49356 437 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 STAT5BP51692 787 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 RAC3P60763 192 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 PUM1Q14671 1186 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRKD3-208ENST00000475912 PCOLCEQ15113 449 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 ZXDCQ2QGD7 858 aaPredicted RBP6.81□□□□□ -1.32
PRKD3-208ENST00000475912 AGBL4Q5VU57 503 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 TRIM68Q6AZZ1 485 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 TCTN3Q6NUS6 607 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 C16orf86Q6ZW13 317 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 JAZF1Q86VZ6 243 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 KIAA1958Q8N8K9 716 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 GIMAP8Q8ND71 665 aaPredicted RBP6.81□□□□□ -1.32
PRKD3-208ENST00000475912 APPBP2Q92624 585 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 DVL3Q92997 716 aaPredicted RBP6.81□□□□□ -1.32
PRKD3-208ENST00000475912 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 FOXB1Q99853 325 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 JAG2Q9Y219 1238 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 STRCP1A6NGW2 1772 aa6.81□□□□□ -1.32
PRKD3-208ENST00000475912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRKD3-208ENST00000475912 PREX2Q70Z35 1606 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 FOXS1O43638 330 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 KPNA6O60684 536 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 NPHP4O75161 1426 aaPredicted RBP6.8□□□□□ -1.32
PRKD3-208ENST00000475912 PRLP01236 227 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 PTX3P26022 381 aaPredicted RBP6.8□□□□□ -1.32
PRKD3-208ENST00000475912 MRE11P49959 708 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 MEOX1P50221 254 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 SLC6A3Q01959 620 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 ZNF174Q15697 407 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 RTKN2Q8IZC4 609 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 Q8TCH9 128 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 WWC2-AS2Q96NR7 200 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 DPYSL5Q9BPU6 564 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 KLC2Q9H0B6 622 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 ACSS2Q9NR19 701 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 INTS7Q9NVH2 962 aaKnown RBP6.8□□□□□ -1.32
PRKD3-208ENST00000475912 OAZ3Q9UMX2 235 aa6.8□□□□□ -1.32
PRKD3-208ENST00000475912 MED14O60244 1454 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 SYNMO15061 1565 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 MATN2O00339 956 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 ARHGAP6O43182 974 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 ZNF623O75123 536 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 SLC9A1P19634 815 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 RGS3P49796 1198 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 CDSNQ15517 529 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 CREB3L3Q68CJ9 461 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 GGT6Q6P531 493 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 USP30Q70CQ3 517 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 PALM2Q8IXS6 379 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 C12orf65Q9H3J6 166 aaKnown RBP6.79□□□□□ -1.32
PRKD3-208ENST00000475912 MAGEL2Q9UJ55 1249 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 ZFR2Q9UPR6 939 aaKnown RBP6.79□□□□□ -1.32
PRKD3-208ENST00000475912 MYRFQ9Y2G1 1151 aa6.79□□□□□ -1.32
PRKD3-208ENST00000475912 CLIP1P30622 1438 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 SYCP2Q9BX26 1530 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 UBA6A0AVT1 1052 aaPredicted RBP6.78□□□□□ -1.32
PRKD3-208ENST00000475912 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 CDC14BO60729 498 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 CDC45O75419 566 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 CR2P20023 1033 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 NEK4P51957 841 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 ROM1Q03395 351 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 NFYCQ13952 458 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 CNNM4Q6P4Q7 775 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
PRKD3-208ENST00000475912 NINJ1Q92982 152 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 E2F7Q96AV8 911 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 C16orf92Q96LL3 132 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 H2AFY2Q9P0M6 372 aaPredicted RBP6.78□□□□□ -1.32
PRKD3-208ENST00000475912 FAM184BQ9ULE4 1060 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 TCAF1Q9Y4C2 921 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 TNRQ92752 1358 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 A2MP01023 1474 aa6.78□□□□□ -1.32
PRKD3-208ENST00000475912 INO80Q9ULG1 1556 aaPredicted RBP6.78□□□□□ -1.32
PRKD3-208ENST00000475912 ATP7AQ04656 1500 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 DEPDC5O75140 1603 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 CYP17A1P05093 508 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 SELENOPP49908 381 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 SLFN12LQ6IEE8 588 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 ESRP1Q6NXG1 681 aaKnown RBP6.77□□□□□ -1.33
PRKD3-208ENST00000475912 LRRTM3Q86VH5 581 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 DHX37Q8IY37 1157 aaKnown RBP6.77□□□□□ -1.33
PRKD3-208ENST00000475912 NIM1KQ8IY84 436 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 FUKQ8N0W3 1084 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 OR14K1Q8NGZ2 314 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 CFHR4Q92496 578 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 ELF4Q99607 663 aaPredicted RBP6.77□□□□□ -1.33
PRKD3-208ENST00000475912 OXSMQ9NWU1 459 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 TSC22D4Q9Y3Q8 395 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 IQGAP1P46940 1657 aa6.77□□□□□ -1.33
PRKD3-208ENST00000475912 SPAG9O60271 1321 aaKnown RBP6.76□□□□□ -1.33
PRKD3-208ENST00000475912 ZNF891A8MT65 544 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms