RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 PRRC2BQ5JSZ5 2229 aaKnown RBP26.74■■□□□ 1.87
CPNE1-223ENST00000475146 VPS37CA5D8V6 355 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-223ENST00000475146 ASAP2O43150 1006 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 GPM6BQ13491 265 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 SKIV2LQ15477 1246 aaKnown RBP26.74■■□□□ 1.87
CPNE1-223ENST00000475146 RNF149Q8NC42 400 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 ELAC1Q9H777 363 aaKnown RBP26.74■■□□□ 1.87
CPNE1-223ENST00000475146 IFT122Q9HBG6 1241 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 PRDM6Q9NQX0 595 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 DACT1Q9NYF0 836 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 PIN4Q9Y237 131 aaKnown RBP26.74■■□□□ 1.87
CPNE1-223ENST00000475146 RALGAPA2Q2PPJ7 1873 aa26.74■■□□□ 1.87
CPNE1-223ENST00000475146 TBKBP1A7MCY6 615 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 K7ELQ4 463 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-223ENST00000475146 FGFR1P11362 822 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 PDCP20941 246 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 FAM189BP81408 668 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 FAM102BQ5T8I3 360 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 SRGAP1Q7Z6B7 1085 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 RNF169Q8NCN4 708 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 CLP1Q92989 425 aaKnown RBP26.73■■□□□ 1.87
CPNE1-223ENST00000475146 LMCD1Q9NZU5 365 aa26.73■■□□□ 1.87
CPNE1-223ENST00000475146 DBR1Q9UK59 544 aaKnown RBP26.73■■□□□ 1.87
CPNE1-223ENST00000475146 H3BNC9 293 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 LINC00271P0C7V0 271 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 BMPR1AP36894 532 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 PRPHP41219 470 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 PHKA2P46019 1235 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 PDIA5Q14554 519 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 MXD4Q14582 209 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-223ENST00000475146 DTHD1Q6ZMT9 781 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 ECHDC2Q86YB7 292 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 SNX29Q8TEQ0 813 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 CHST12Q9NRB3 414 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 FOXD4L1Q9NU39 408 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 STK24Q9Y6E0 443 aa26.72■■□□□ 1.87
CPNE1-223ENST00000475146 ARHGEF35A5YM69 484 aa26.71■■□□□ 1.87
CPNE1-223ENST00000475146 RB1P06400 928 aa26.71■■□□□ 1.87
CPNE1-223ENST00000475146 TFDP1Q14186 410 aa26.71■■□□□ 1.87
CPNE1-223ENST00000475146 PTPROQ16827 1216 aa26.71■■□□□ 1.87
CPNE1-223ENST00000475146 TWF2Q6IBS0 349 aaKnown RBP26.71■■□□□ 1.87
CPNE1-223ENST00000475146 MAEAQ7L5Y9 396 aa26.71■■□□□ 1.87
CPNE1-223ENST00000475146 IGSF22Q8N9C0 903 aa26.71■■□□□ 1.87
CPNE1-223ENST00000475146 C11orf84Q9BUA3 381 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-223ENST00000475146 POLR3FQ9H1D9 316 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-223ENST00000475146 C5orf67F2Z3F1 127 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 HOXA2O43364 376 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 MUTP22033 750 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 ATP2C1P98194 919 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-223ENST00000475146 IL17AQ16552 155 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 SPOUT1Q5T280 376 aaKnown RBP26.7■■□□□ 1.86
CPNE1-223ENST00000475146 BRAPQ7Z569 592 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 ABI1Q8IZP0 508 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 ASAP3Q8TDY4 903 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 MINDY3Q9H8M7 445 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 THEGQ9P2T0 379 aa26.7■■□□□ 1.86
CPNE1-223ENST00000475146 A0A0U1RQF3 1178 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 PP2D1A8MPX8 630 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 ARL2P36404 184 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 ECM1Q16610 540 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 KRT79Q5XKE5 535 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 MCPH1Q8NEM0 835 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 MRPL38Q96DV4 380 aaKnown RBP26.69■■□□□ 1.86
CPNE1-223ENST00000475146 INTS4Q96HW7 963 aaKnown RBP26.69■■□□□ 1.86
CPNE1-223ENST00000475146 GPRC5CQ9NQ84 441 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 AGPAT5Q9NUQ2 364 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 KIAA1024Q9UPX6 916 aa26.69■■□□□ 1.86
CPNE1-223ENST00000475146 GLRA2P23416 452 aa26.68■■□□□ 1.86
CPNE1-223ENST00000475146 CAPSQ13938 189 aa26.68■■□□□ 1.86
CPNE1-223ENST00000475146 PADI6Q6TGC4 694 aa26.68■■□□□ 1.86
CPNE1-223ENST00000475146 PLVAPQ9BX97 442 aa26.68■■□□□ 1.86
CPNE1-223ENST00000475146 TMEM117Q9H0C3 514 aa26.68■■□□□ 1.86
CPNE1-223ENST00000475146 DDX19AQ9NUU7 478 aaKnown RBP26.68■■□□□ 1.86
CPNE1-223ENST00000475146 FNDC1Q4ZHG4 1894 aaPredicted RBP26.68■■□□□ 1.86
CPNE1-223ENST00000475146 ERLIN2O94905 339 aa26.67■■□□□ 1.86
CPNE1-223ENST00000475146 PTENP60484 403 aa26.67■■□□□ 1.86
CPNE1-223ENST00000475146 RNF19AQ9NV58 838 aa26.67■■□□□ 1.86
CPNE1-223ENST00000475146 KIAA1671Q9BY89 1806 aa26.67■■□□□ 1.86
CPNE1-223ENST00000475146 VWA3AA6NCI4 1184 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 INO80B-WBP1J3KQ70 363 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 EOMESO95936 686 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 SKIP12755 728 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 CDC25AP30304 524 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 HSCBQ8IWL3 235 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 BHMT2Q9H2M3 363 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 FAM105AQ9NUU6 356 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 HCSTQ9UBK5 93 aa26.66■■□□□ 1.86
CPNE1-223ENST00000475146 LRRIQ4A6NIV6 560 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 GRM6O15303 877 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 CSPG5O95196 566 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 ATF7P17544 494 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-223ENST00000475146 CYP11B2P19099 503 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 SYT1P21579 422 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 RAB27AP51159 221 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 ZRSR1Q15695 479 aaKnown RBP26.65■■□□□ 1.86
CPNE1-223ENST00000475146 TIGD5Q53EQ6 642 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 ARL6IP4Q66PJ3 421 aaKnown RBP26.65■■□□□ 1.86
CPNE1-223ENST00000475146 ZNF598Q86UK7 904 aaKnown RBP26.65■■□□□ 1.86
CPNE1-223ENST00000475146 SNX21Q969T3 373 aa26.65■■□□□ 1.86
CPNE1-223ENST00000475146 CASD1Q96PB1 797 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms