RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TMED8Q6PL24 325 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-206ENST00000471968 Q6ZS52 159 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 GPR155Q7Z3F1 870 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 PIP4P1Q86T03 277 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 FMNL3Q8IVF7 1028 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 NSUN6Q8TEA1 469 aaKnown RBP7.74□□□□□ -1.17
HDAC3-206ENST00000471968 ADAMTS14Q8WXS8 1223 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 FAM3CQ92520 227 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 ZNF512BQ96KM6 892 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-206ENST00000471968 PHF12Q96QT6 1004 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 TAAR1Q96RJ0 339 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 MLXIPQ9HAP2 919 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 RGS18Q9NS28 235 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 TMEM161AQ9NX61 479 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 TUBE1Q9UJT0 475 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 SYNPO2Q9UMS6 1093 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 TRPV2Q9Y5S1 764 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 CSMD1Q96PZ7 3565 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 LRBAP50851 2863 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 IGSF9BQ9UPX0 1349 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 MYH4Q9Y623 1939 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 M0QZ92 97 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 ERVH48-1M5A8F1 160 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 NOP56O00567 594 aaKnown RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 SRGAP3O43295 1099 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 EIF3JO75822 258 aaKnown RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 CFBP00751 764 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 C6P13671 934 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 PDE6AP16499 860 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 UBA1P22314 1058 aaKnown RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 HOXA6P31267 233 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 SLC16A2P36021 539 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 IRX4P78413 519 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 SP2Q02086 613 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 SERINC3Q13530 473 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 ELF2Q15723 593 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 SLC9C2Q5TAH2 1124 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 UTP14CQ5TAP6 766 aaKnown RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 ELMSAN1Q6PJG2 1045 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 KRT25Q7Z3Z0 450 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 DDX53Q86TM3 631 aaKnown RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 ZBTB10Q96DT7 871 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 DUSP15Q9H1R2 295 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 RBM12Q9NTZ6 932 aaKnown RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 ZNF215Q9UL58 517 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-206ENST00000471968 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 KIAA1217Q5T5P2 1943 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 ZNF532Q9HCE3 1301 aa7.73□□□□□ -1.17
HDAC3-206ENST00000471968 BAZ2AQ9UIF9 1905 aaKnown RBP7.72□□□□□ -1.17
HDAC3-206ENST00000471968 PLXNB3Q9ULL4 1909 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 MEFVO15553 781 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-206ENST00000471968 HOXA2O43364 376 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 KRT10P13645 584 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 EIF2AK2P19525 551 aaKnown RBP7.72□□□□□ -1.17
HDAC3-206ENST00000471968 PPFIA1Q13136 1202 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 SEMA3BQ13214 749 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 PTGDRQ13258 359 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 TNNI3KQ59H18 835 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 RCSD1Q6JBY9 416 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 CTR9Q6PD62 1173 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-206ENST00000471968 LRRC69Q6ZNQ3 347 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 FGF13Q92913 245 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 RMDN3Q96TC7 470 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 NT5C3AQ9H0P0 336 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 RNF19AQ9NV58 838 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 STK24Q9Y6E0 443 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 FPGT-TNNI3KV9GXZ4 949 aa7.72□□□□□ -1.17
HDAC3-206ENST00000471968 CCDC194A0A1B0GVG4 234 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 TRABD2BA6NFA1 517 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.18
HDAC3-206ENST00000471968 AKAP3O75969 853 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 RHOBTB1O94844 696 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 MBD4O95243 580 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 GLUD1P00367 558 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 FTH1P19P0C7X4 201 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 ADSSP30520 456 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 IL12RB1P42701 662 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 IGBP1P78318 339 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 NTHL1P78549 312 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 G3BP1Q13283 466 aaKnown RBP eCLIP7.71□□□□□ -1.18
HDAC3-206ENST00000471968 CCDC96Q2M329 555 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 ARHGEF16Q5VV41 709 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 TTBK2Q6IQ55 1244 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 MARCH9Q86YJ5 346 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 RNF169Q8NCN4 708 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 BCL7CQ8WUZ0 217 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-206ENST00000471968 DNASE1L2Q92874 299 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 LIN37Q96GY3 246 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-206ENST00000471968 IGSF21Q96ID5 467 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 CELF4Q9BZC1 486 aaKnown RBP7.71□□□□□ -1.18
HDAC3-206ENST00000471968 PLA2G2FQ9BZM2 168 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms