RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 RSPH1Q8WYR4 309 aa17.5■□□□□ 0.39
MCF2L-211ENST00000413354 TMEM143Q96AN5 459 aa17.5■□□□□ 0.39
MCF2L-211ENST00000413354 AAASQ9NRG9 546 aa17.5■□□□□ 0.39
MCF2L-211ENST00000413354 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
MCF2L-211ENST00000413354 H3BQV1 296 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 SKIP12755 728 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 FGFR4P22455 802 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 TECP42680 631 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 MXD4Q14582 209 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 CSPP1Q1MSJ5 1256 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 SPOUT1Q5T280 376 aaKnown RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 CATSPER4Q7RTX7 472 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 SRGAP1Q7Z6B7 1085 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 ECHDC2Q86YB7 292 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 ABI1Q8IZP0 508 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 ZNF579Q8NAF0 562 aaKnown RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 PRPF31Q8WWY3 499 aaKnown RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 HLA-CQ95604 372 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 ASB2Q96Q27 587 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 POLR3CQ9BUI4 534 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 COL25A1Q9BXS0 654 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 TMEM117Q9H0C3 514 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 BMP2KQ9NSY1 1161 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-211ENST00000413354 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 A0A0C4DFX4 3053 aa17.49■□□□□ 0.39
MCF2L-211ENST00000413354 A0A0U1RQF3 1178 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 LAD1O00515 517 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 EOMESO95936 686 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 MUTP22033 750 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 PHKA2P46019 1235 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 RARRES1P49788 294 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 GATMP50440 423 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 RAB27AP51159 221 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 LAMTOR4Q0VGL1 99 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 TFDP1Q14186 410 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 PCBP1Q15365 356 aaKnown RBP eCLIP17.48■□□□□ 0.39
MCF2L-211ENST00000413354 FAM102BQ5T8I3 360 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 TWF2Q6IBS0 349 aaKnown RBP17.48■□□□□ 0.39
MCF2L-211ENST00000413354 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 KSR1Q8IVT5 923 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 TRAIPQ9BWF2 469 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 IFT122Q9HBG6 1241 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 PIN4Q9Y237 131 aaKnown RBP17.48■□□□□ 0.39
MCF2L-211ENST00000413354 PCDHB12Q9Y5F1 795 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
MCF2L-211ENST00000413354 ZBTB39O15060 712 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 CSDE1O75534 798 aaKnown RBP17.47■□□□□ 0.39
MCF2L-211ENST00000413354 SRGAP2CP0DJJ0 459 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 FGFR1P11362 822 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 LAG3P18627 525 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 RPA1P27694 616 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 FXR2P51116 673 aaKnown RBP eCLIP17.47■□□□□ 0.39
MCF2L-211ENST00000413354 RILPL1Q5EBL4 403 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 RNF149Q8NC42 400 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 PPP2R3CQ969Q6 453 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 NACC1Q96RE7 527 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 BACH2Q9BYV9 841 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 XPNPEP1Q9NQW7 623 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 AGPAT5Q9NUQ2 364 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 DBR1Q9UK59 544 aaKnown RBP17.47■□□□□ 0.39
MCF2L-211ENST00000413354 NCOR1O75376 2440 aa17.47■□□□□ 0.39
MCF2L-211ENST00000413354 TCF20Q9UGU0 1960 aaKnown RBP17.46■□□□□ 0.39
MCF2L-211ENST00000413354 MED24O75448 989 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 SPATA31C1P0DKV0 1188 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 POU5F1BQ06416 359 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 NBR1Q14596 966 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 CATSPER3Q86XQ3 398 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 RNF169Q8NCN4 708 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 MCPH1Q8NEM0 835 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 PIGOQ8TEQ8 1089 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 MRPL9Q9BYD2 267 aaKnown RBP17.46■□□□□ 0.39
MCF2L-211ENST00000413354 PLAGL2Q9UPG8 496 aa17.46■□□□□ 0.39
MCF2L-211ENST00000413354 TTC28Q96AY4 2481 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 GRM6O15303 877 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 NCK2O43639 380 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 USO1O60763 962 aaKnown RBP17.45■□□□□ 0.38
MCF2L-211ENST00000413354 ERLIN2O94905 339 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 PRPHP41219 470 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-211ENST00000413354 UBE3AQ05086 875 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 PTGDRQ13258 359 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 PDIA5Q14554 519 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 ZNF598Q86UK7 904 aaKnown RBP17.45■□□□□ 0.38
MCF2L-211ENST00000413354 C4orf32Q8N8J7 132 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 KLHL23Q8NBE8 558 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 CASD1Q96PB1 797 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 UBE2ZQ9H832 354 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-211ENST00000413354 RNF19AQ9NV58 838 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 LRWD1Q9UFC0 647 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 PCDHB6Q9Y5E3 794 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 REV3LO60673 3130 aa17.45■□□□□ 0.38
MCF2L-211ENST00000413354 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
MCF2L-211ENST00000413354 CARNS1A5YM72 827 aa17.44■□□□□ 0.38
MCF2L-211ENST00000413354 ITGB1P05556 798 aa17.44■□□□□ 0.38
MCF2L-211ENST00000413354 AXLP30530 894 aa17.44■□□□□ 0.38
MCF2L-211ENST00000413354 CCT6AP40227 531 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms