RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 IRAK3Q9Y616 596 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 R4GN57 208 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 CNTNAP5Q8WYK1 1306 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 ZNF292O60281 2723 aa18.89■□□□□ 0.62
CHMP3-203ENST00000409225 SMCO2A6NFE2 343 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 NARSO43776 548 aaKnown RBP18.89■□□□□ 0.61
CHMP3-203ENST00000409225 DARSP14868 501 aaKnown RBP18.89■□□□□ 0.61
CHMP3-203ENST00000409225 RFX1P22670 979 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 POLGP54098 1239 aaPredicted RBP18.89■□□□□ 0.61
CHMP3-203ENST00000409225 AP3B2Q13367 1082 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 LONRF3Q496Y0 759 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 LINC01465Q8N7H1 131 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 RIN2Q8WYP3 895 aaPredicted RBP18.89■□□□□ 0.61
CHMP3-203ENST00000409225 IGSF21Q96ID5 467 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 ZNF577Q9BSK1 485 aa18.89■□□□□ 0.61
CHMP3-203ENST00000409225 MYH9P35579 1960 aaKnown RBP18.88■□□□□ 0.61
CHMP3-203ENST00000409225 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
CHMP3-203ENST00000409225 PSAPP07602 524 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 CFHP08603 1231 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 GPC3P51654 580 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 JAKMIP3Q5VZ66 844 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 ZNF746Q6NUN9 644 aaPredicted RBP18.88■□□□□ 0.61
CHMP3-203ENST00000409225 PPFIBP1Q86W92 1011 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 NLRP7Q8WX94 980 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 LPPQ93052 612 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 HINFPQ9BQA5 517 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 DACT1Q9NYF0 836 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 WDR87Q6ZQQ6 2873 aa18.88■□□□□ 0.61
CHMP3-203ENST00000409225 IGLV3-22A0A075B6J6 115 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 CLK2P49760 499 aaKnown RBP18.87■□□□□ 0.61
CHMP3-203ENST00000409225 PTPN14Q15678 1187 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 SMAP1Q8IYB5 467 aaPredicted RBP18.87■□□□□ 0.61
CHMP3-203ENST00000409225 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 GBP3Q9H0R5 595 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 SEMA4AQ9H3S1 761 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 NRDE2Q9H7Z3 1164 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 TBC1D22BQ9NU19 505 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 INPP5FQ9Y2H2 1132 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 SAMM50Q9Y512 469 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 PCDHA10Q9Y5I2 948 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 DMXL1Q9Y485 3027 aa18.87■□□□□ 0.61
CHMP3-203ENST00000409225 KRBA1A5PL33 1030 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 SSBP05455 408 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHMP3-203ENST00000409225 GALTP07902 379 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 KLRC2P26717 231 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 ZNF710Q8N1W2 664 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 RSAD2Q8WXG1 361 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 KLHL5Q96PQ7 755 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 VN1R3Q9BXE9 311 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 IGSF9Q9P2J2 1179 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 CA14Q9ULX7 337 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 V9GY48 417 aaPredicted RBP18.86■□□□□ 0.61
CHMP3-203ENST00000409225 DNAH14Q0VDD8 3507 aa18.86■□□□□ 0.61
CHMP3-203ENST00000409225 PHKA2P46019 1235 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 SLC11A1P49279 550 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 CLCN4P51793 760 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 RNASELQ05823 741 aaKnown RBP18.85■□□□□ 0.61
CHMP3-203ENST00000409225 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 SYNE3Q6ZMZ3 975 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 EMILIN2Q9BXX0 1053 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 GLT8D2Q9H1C3 349 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 BARHL2Q9NY43 387 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 WNT16Q9UBV4 365 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 DNAJB4Q9UDY4 337 aa18.85■□□□□ 0.61
CHMP3-203ENST00000409225 C2orf16Q68DN1 1984 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 hCG_1984214I3L0E3 225 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 ZNF862O60290 1169 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 N4BP1O75113 896 aaKnown RBP18.84■□□□□ 0.61
CHMP3-203ENST00000409225 OATP04181 439 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 CYP3A4P08684 503 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 GBP2P32456 591 aaPredicted RBP18.84■□□□□ 0.61
CHMP3-203ENST00000409225 PUM1Q14671 1186 aaKnown RBP eCLIP18.84■□□□□ 0.61
CHMP3-203ENST00000409225 SPECC1Q5M775 1068 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 TWF2Q6IBS0 349 aaKnown RBP18.84■□□□□ 0.61
CHMP3-203ENST00000409225 GLB1LQ6UWU2 654 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 ZNF713Q8N859 430 aaPredicted RBP18.84■□□□□ 0.61
CHMP3-203ENST00000409225 TBC1D17Q9HA65 648 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 CHST12Q9NRB3 414 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 NRBP2Q9NSY0 501 aa18.84■□□□□ 0.61
CHMP3-203ENST00000409225 RBM28Q9NW13 759 aaKnown RBP18.84■□□□□ 0.61
CHMP3-203ENST00000409225 CARNS1A5YM72 827 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 MEIS3P2A8K0S8 358 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 SLC27A2O14975 620 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 CNPP09543 421 aaKnown RBP18.83■□□□□ 0.6
CHMP3-203ENST00000409225 SETQ01105 290 aaPredicted RBP18.83■□□□□ 0.6
CHMP3-203ENST00000409225 PRKCEQ02156 737 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 TBC1D8BQ0IIM8 1120 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 FUT2Q10981 343 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 C15orf39Q6ZRI6 1047 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 SGMS1Q86VZ5 419 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 CRYGNQ8WXF5 182 aa18.83■□□□□ 0.6
CHMP3-203ENST00000409225 GCOM2Q9BZD3 368 aaPredicted RBP18.83■□□□□ 0.6
CHMP3-203ENST00000409225 B4GALT3O60512 393 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 OFD1O75665 1012 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 DCNP07585 359 aaKnown RBP18.82■□□□□ 0.6
CHMP3-203ENST00000409225 DRP2Q13474 957 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms