RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 GALNSP34059 522 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 HOXD12P35452 270 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 PIK3CAP42336 1068 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 GYG1P46976 350 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 TNFAIP2Q03169 654 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 SLC45A4Q5BKX6 768 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 CAVIN4Q5BKX8 364 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 XP32Q5T750 250 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 SPATA1Q5VX52 437 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 CEP85Q6P2H3 762 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 CCDC149Q6ZUS6 474 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 FASTKD5Q7L8L6 764 aaKnown RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 RPAP2Q8IXW5 612 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 CNTROBQ8N137 903 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 KDF1Q8NAX2 398 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 GRIN3AQ8TCU5 1115 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 HDAC2Q92769 488 aaKnown RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZBED3Q96IU2 234 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 UBXN10Q96LJ8 280 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 RIPOR3Q96MK2 946 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZMAT2Q96NC0 199 aaKnown RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZSCAN10Q96SZ4 725 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 SLC9A7Q96T83 725 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 OSMRQ99650 979 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 ACO2Q99798 780 aaKnown RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 RNF38Q9H0F5 515 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 VPS11Q9H270 941 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 GPR108Q9NPR9 543 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 VPS45Q9NRW7 570 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 C14orf119Q9NWQ9 140 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 MKS1Q9NXB0 559 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 ODF2LQ9ULJ1 636 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 TMCC3Q9ULS5 477 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 PA2G4Q9UQ80 394 aaKnown RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 CDK5RAP2Q96SN8 1893 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 LAMB1P07942 1786 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 PDS5AQ29RF7 1337 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 PITPNM2Q9BZ72 1349 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 MYH7P12883 1935 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 AK9Q5TCS8 1911 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 TCRBV16S1A1N1A0A5B0 115 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 BLACEA4D250 179 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 SMTNL1A8MU46 457 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 H3BRJ5 948 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 CLGNO14967 610 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 AREL1O15033 823 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 HTR3BO95264 441 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 GDF11O95390 407 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 EGFRP00533 1210 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ITGAVP06756 1048 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 NME1P15531 152 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 PPM1AP35813 382 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 CDK8P49336 464 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 GABREP78334 506 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 KRT85P78386 507 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 SART3Q15020 963 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ATP2B3Q16720 1220 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 DNAJC21Q5F1R6 531 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 C20orf194Q5TEA3 1177 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ITPRIPL1Q6GPH6 555 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 TMEM214Q6NUQ4 689 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 CCDC116Q8IYX3 515 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 C7orf61Q8IZ16 206 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 CERS5Q8N5B7 392 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 FLCNQ8NFG4 579 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 RHBDD1Q8TEB9 315 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ATG4CQ96DT6 458 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 RSRC1Q96IZ7 334 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 WNK4Q96J92 1243 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 MRIQ9BWK5 157 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 SIL1Q9H173 461 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ATP6V0A4Q9HBG4 840 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ARFGAP3Q9NP61 516 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZCCHC17Q9NP64 241 aaKnown RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 MYOZ2Q9NPC6 264 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 TOPORSQ9NS56 1045 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 TMEM39AQ9NV64 488 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 RTEL1Q9NZ71 1219 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 GPRC5BQ9NZH0 403 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 IFT80Q9P2H3 777 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 LRP2BPQ9P2M1 347 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 SUSD2Q9UGT4 822 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 SYNPO2Q9UMS6 1093 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 CYP8B1Q9UNU6 501 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 DOCK2Q92608 1830 aa6.1□□□□□ -1.43
HMGB3P7-201ENST00000400214 FOCADQ5VW36 1801 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 SALL1Q9NSC2 1324 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 GTPBP10A4D1E9 387 aaKnown RBP6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 TSPY2A6NKD2 308 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 MEN1O00255 615 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 TBX1O43435 398 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 EFCAB14O75071 495 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 PPFIA3O75145 1194 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 OFD1O75665 1012 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 ARIH2O95376 493 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 TBC1D8O95759 1140 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 CFBP00751 764 aa6.09□□□□□ -1.43
HMGB3P7-201ENST00000400214 SOD2P04179 222 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms