RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CEP170P1Q96L14 293 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 TTC12Q9H892 705 aaPredicted RBP19.09■□□□□ 0.65
BRCC3-202ENST00000340647 BMP2KQ9NSY1 1161 aaPredicted RBP19.09■□□□□ 0.65
BRCC3-202ENST00000340647 PCDHA12Q9UN75 941 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 MEIS3P2A8K0S8 358 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 H3BQ06 376 aaPredicted RBP19.08■□□□□ 0.64
BRCC3-202ENST00000340647 LINC01565O15544 149 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 CSPG5O95196 566 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 LYPLA2O95372 231 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 SPATA31C1P0DKV0 1188 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 CALCRLQ16602 461 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 NAALADL2Q58DX5 795 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 ZNF410Q86VK4 478 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 POF1BQ8WVV4 589 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 PRPF31Q8WWY3 499 aaKnown RBP19.08■□□□□ 0.64
BRCC3-202ENST00000340647 LRFN3Q9BTN0 628 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 ZSWIM4Q9H7M6 989 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 ATP6V0A4Q9HBG4 840 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 BRMS1Q9HCU9 246 aa19.08■□□□□ 0.64
BRCC3-202ENST00000340647 POTEMA6NI47 508 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 NEMFO60524 1076 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 IL9P15248 144 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 TXKP42681 527 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 TPH2Q8IWU9 490 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 C4orf32Q8N8J7 132 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 COLGALT1Q8NBJ5 622 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 C8orf76Q96K31 380 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 TRAIPQ9BWF2 469 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 GCOM2Q9BZD3 368 aaPredicted RBP19.07■□□□□ 0.64
BRCC3-202ENST00000340647 TMEM117Q9H0C3 514 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 COL4A3BPQ9Y5P4 624 aa19.07■□□□□ 0.64
BRCC3-202ENST00000340647 GRXCR2A6NFK2 248 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 TBX10O75333 385 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 BAG4O95429 457 aaKnown RBP19.06■□□□□ 0.64
BRCC3-202ENST00000340647 ZSCAN20P17040 1043 aaPredicted RBP19.06■□□□□ 0.64
BRCC3-202ENST00000340647 HOXA11P31270 313 aaPredicted RBP19.06■□□□□ 0.64
BRCC3-202ENST00000340647 PBX3P40426 434 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 ERVFC1P60507 584 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 CDC42EP1Q00587 391 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 EMC2Q15006 297 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 ZSCAN31Q96LW9 406 aaPredicted RBP19.06■□□□□ 0.64
BRCC3-202ENST00000340647 NLRP4Q96MN2 994 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 C11orf16Q9NQ32 467 aa19.06■□□□□ 0.64
BRCC3-202ENST00000340647 DKC1O60832 514 aaKnown RBP eCLIP19.05■□□□□ 0.64
BRCC3-202ENST00000340647 FGF18O76093 207 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 ATP2B1P20020 1258 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 MCM7P33993 719 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 PHKA2P46019 1235 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 DNM2P50570 870 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 TOB1P50616 345 aaPredicted RBP19.05■□□□□ 0.64
BRCC3-202ENST00000340647 LAMTOR4Q0VGL1 99 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 ADAM15Q13444 863 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 TRIM29Q14134 588 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 NBR1Q14596 966 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 XKR9Q5GH70 373 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 FERMT3Q86UX7 667 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 LPPQ93052 612 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 SCLT1Q96NL6 688 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 FOXP1Q9H334 677 aaPredicted RBP19.05■□□□□ 0.64
BRCC3-202ENST00000340647 CHST12Q9NRB3 414 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 SH2B1Q9NRF2 756 aaPredicted RBP19.05■□□□□ 0.64
BRCC3-202ENST00000340647 PPME1Q9Y570 386 aa19.05■□□□□ 0.64
BRCC3-202ENST00000340647 FSCN2O14926 492 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 MARCH6O60337 910 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 B4GALT3O60512 393 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 MED24O75448 989 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 GLP2RO95838 553 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 EOMESO95936 686 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 HOXD11P31277 338 aaPredicted RBP19.04■□□□□ 0.64
BRCC3-202ENST00000340647 RFC5P40937 340 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 RARRES1P49788 294 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 POLGP54098 1239 aaPredicted RBP19.04■□□□□ 0.64
BRCC3-202ENST00000340647 ZNF174Q15697 407 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 UBXN11Q5T124 520 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 HELQQ8TDG4 1101 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 PIGOQ8TEQ8 1089 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 SLC7A3Q8WY07 619 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 AGPAT5Q9NUQ2 364 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 CLDND1Q9NY35 253 aa19.04■□□□□ 0.64
BRCC3-202ENST00000340647 ZNF623O75123 536 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 SRGAP2CP0DJJ0 459 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 ARL2P36404 184 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 AFF1P51825 1210 aaKnown RBP19.03■□□□□ 0.64
BRCC3-202ENST00000340647 HMGN5P82970 282 aaKnown RBP19.03■□□□□ 0.64
BRCC3-202ENST00000340647 RBM10P98175 930 aaKnown RBP19.03■□□□□ 0.64
BRCC3-202ENST00000340647 LONRF3Q496Y0 759 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 PTCRAQ6ISU1 281 aaPredicted RBP19.03■□□□□ 0.64
BRCC3-202ENST00000340647 OTUD6AQ7L8S5 288 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 CATSPER3Q86XQ3 398 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 FAM178BQ8IXR5 827 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 VN1R2Q8NFZ6 395 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 ASAP3Q8TDY4 903 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 MSLNLQ96KJ4 702 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 JPH2Q9BR39 696 aaPredicted RBP19.03■□□□□ 0.64
BRCC3-202ENST00000340647 ANKEF1Q9NU02 776 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 FAM105AQ9NUU6 356 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 CLEC1BQ9P126 229 aa19.03■□□□□ 0.64
BRCC3-202ENST00000340647 SFPQP23246 707 aaKnown RBP eCLIP19.02■□□□□ 0.64
BRCC3-202ENST00000340647 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.641e-9■■■□□ 15.6
BRCC3-202ENST00000340647 PLCB3Q01970 1234 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms