RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 N4bp3Q8C7U1 537 aa17.03■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Acot11Q8VHQ9 594 aa17.03■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Tmem132aQ922P8 1018 aa17.03■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Nol7Q9D7Z3 254 aaKnown RBP17.03■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Smco2Q9DA21 347 aa17.03■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Olig1Q9JKN5 260 aa17.03■□□□□ 0.32
Ubp1-206ENSMUST00000216558 Gm8298J3QPI0 401 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Nptx2O70340 429 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Calb1P12658 261 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cct6aP80317 531 aaKnown RBP17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Dpcr1Q3TNW5 500 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Carmil2Q3V3V9 1296 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Znf219Q6IQX8 726 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Acad11Q80XL6 779 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ece2Q80Z60 881 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Bmp3Q8BHE5 468 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 PdgfcQ8CI19 345 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Wrap53Q8VC51 532 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Plcb4Q91UZ1 1175 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Gtf2a1Q99PM3 378 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Pkp2Q9CQ73 795 aaKnown RBP17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Fam111aQ9D2L9 613 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Zbtb12Q9Z150 459 aa17.02■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Clca3bE9PUL3 1044 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Sema4dO09126 861 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Mt-CybP00158 381 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 MybP06876 636 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Slc3a2P10852 526 aaKnown RBP17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Serpinc1P32261 465 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 CiitaP79621 1155 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cyp11b1Q3TG86 501 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Mkrn3Q60764 544 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Atp6v0d2Q80SY3 350 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ttc7aQ8BGB2 858 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 6820408C15RikQ8BJX2 354 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Eif4a3Q91VC3 411 aaKnown RBP17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Slc12a9Q99MR3 914 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Zfp623Q9CY99 499 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ankef1Q9D2J7 775 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Adgrf4Q9D2L6 698 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cyp2s1Q9DBX6 501 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Tlr2Q9QUN7 784 aa17.01■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Dennd4aE9Q8V6 1869 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cyp2b10P12791 500 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 DmpkP54265 631 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Mfsd14aP70187 490 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Psmb7P70195 277 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Muc1Q02496 630 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Dlg4Q62108 724 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Styk1Q6J9G1 429 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 CtifQ6PEE2 600 aaKnown RBP17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Sh3d21Q7TSG5 549 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 GlmnQ8BZM1 596 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 PdxkQ8K183 312 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cbwd1Q8VEH6 393 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Gtpbp4Q99ME9 634 aaKnown RBP17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Creld2Q9CYA0 350 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Sdr42e1Q9D665 394 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Tmem206Q9D771 350 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cse1lQ9ERK4 971 aaKnown RBP17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Klra17Q9JMA4 273 aa17■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Trim5E9PV98 497 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Gcom1E9PZ54 550 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Vmn2r63E9Q0K5 859 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Gm9268E9Q0M3 861 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Serpinb3aG3X9V8 387 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Vmn2r62K7N712 859 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ube3aO08759 870 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 P01734 135 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Stat4P42228 749 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Igfbp4P47879 254 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Tnni3P48787 211 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 MyzapQ3UIJ9 466 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Wdr18Q4VBE8 431 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Nxf2Q4ZGD8 691 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 DeptorQ570Y9 409 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Tpd52Q62393 224 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ccdc169Q8BXX9 214 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Lmo3Q8BZL8 145 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Mamdc2Q8CG85 686 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Serpina9Q9D7D2 418 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Tpcn1Q9EQJ0 817 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Prpf40aQ9R1C7 953 aaKnown RBP16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Myo5aQ99104 1853 aaKnown RBP16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 1700016G14RikA0A286YCZ6 238 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 TxnP10639 105 aaKnown RBP16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ppp3caP63328 521 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 rp9P97762 213 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Tmem232Q5K6N0 675 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Klra6Q60653 266 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Gas8Q60779 478 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Cdc14aQ6GQT0 603 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Acot5Q6Q2Z6 421 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Olfml3Q8BK62 406 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Prpf31Q8CCF0 499 aaKnown RBP16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Trim32Q8CH72 655 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Dlk2Q8K1E3 382 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Olfr395Q8VGR3 312 aa16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Bzw2Q91VK1 419 aaKnown RBP16.99■□□□□ 0.31
Ubp1-206ENSMUST00000216558 Ttc1Q91Z38 292 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms