Protein–RNA interactions for Protein: Q9D665

Sdr42e1, Short-chain dehydrogenase/reductase family 42E member 1, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdr42e1Q9D665 Gm25239-201ENSMUST00000174915 86 ntBASIC40.32■■■■■ 4.05
Sdr42e1Q9D665 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
Sdr42e1Q9D665 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Sdr42e1Q9D665 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Sdr42e1Q9D665 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Sdr42e1Q9D665 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
Sdr42e1Q9D665 Gm15042-201ENSMUST00000120212 883 ntBASIC35.67■■■■□ 3.3
Sdr42e1Q9D665 Gm15045-201ENSMUST00000117359 883 ntBASIC34.96■■■■□ 3.19
Sdr42e1Q9D665 Gm24109-201ENSMUST00000175489 103 ntBASIC34.73■■■■□ 3.15
Sdr42e1Q9D665 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Sdr42e1Q9D665 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Sdr42e1Q9D665 Psd-208ENSMUST00000224556 2034 ntBASIC34.33■■■■□ 3.09
Sdr42e1Q9D665 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.03■■■■□ 3.04
Sdr42e1Q9D665 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Sdr42e1Q9D665 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.91■■■■□ 3.02
Sdr42e1Q9D665 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Sdr42e1Q9D665 Gm23366-201ENSMUST00000175022 89 ntBASIC33.74■■■□□ 2.99
Sdr42e1Q9D665 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Sdr42e1Q9D665 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Sdr42e1Q9D665 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Sdr42e1Q9D665 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Sdr42e1Q9D665 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Sdr42e1Q9D665 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Sdr42e1Q9D665 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
Sdr42e1Q9D665 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Sdr42e1Q9D665 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Sdr42e1Q9D665 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.15■■■□□ 2.9
Sdr42e1Q9D665 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Sdr42e1Q9D665 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Sdr42e1Q9D665 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Sdr42e1Q9D665 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
Sdr42e1Q9D665 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.77■■■□□ 2.84
Sdr42e1Q9D665 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.75■■■□□ 2.83
Sdr42e1Q9D665 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Sdr42e1Q9D665 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Sdr42e1Q9D665 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Sdr42e1Q9D665 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Sdr42e1Q9D665 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Sdr42e1Q9D665 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Sdr42e1Q9D665 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.15■■■□□ 2.74
Sdr42e1Q9D665 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.12■■■□□ 2.73
Sdr42e1Q9D665 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Sdr42e1Q9D665 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Sdr42e1Q9D665 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.86■■■□□ 2.69
Sdr42e1Q9D665 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Sdr42e1Q9D665 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
Sdr42e1Q9D665 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Sdr42e1Q9D665 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Sdr42e1Q9D665 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Sdr42e1Q9D665 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.7■■■□□ 2.67
Sdr42e1Q9D665 Gm25238-201ENSMUST00000174914 89 ntBASIC31.68■■■□□ 2.66
Sdr42e1Q9D665 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Sdr42e1Q9D665 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.6■■■□□ 2.65
Sdr42e1Q9D665 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Sdr42e1Q9D665 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Sdr42e1Q9D665 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Sdr42e1Q9D665 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Sdr42e1Q9D665 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Sdr42e1Q9D665 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Sdr42e1Q9D665 Gm27325-201ENSMUST00000175467 74 ntBASIC31.34■■■□□ 2.61
Sdr42e1Q9D665 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Sdr42e1Q9D665 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.23■■■□□ 2.59
Sdr42e1Q9D665 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.22■■■□□ 2.59
Sdr42e1Q9D665 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.21■■■□□ 2.59
Sdr42e1Q9D665 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Sdr42e1Q9D665 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Sdr42e1Q9D665 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.16■■■□□ 2.58
Sdr42e1Q9D665 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Sdr42e1Q9D665 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Sdr42e1Q9D665 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Sdr42e1Q9D665 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
Sdr42e1Q9D665 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Sdr42e1Q9D665 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.03■■■□□ 2.56
Sdr42e1Q9D665 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Sdr42e1Q9D665 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sdr42e1Q9D665 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sdr42e1Q9D665 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.79■■■□□ 2.52
Sdr42e1Q9D665 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.78■■■□□ 2.52
Sdr42e1Q9D665 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Sdr42e1Q9D665 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Sdr42e1Q9D665 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sdr42e1Q9D665 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.62■■■□□ 2.49
Sdr42e1Q9D665 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.61■■■□□ 2.49
Sdr42e1Q9D665 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sdr42e1Q9D665 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
Sdr42e1Q9D665 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sdr42e1Q9D665 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sdr42e1Q9D665 Rab21-202ENSMUST00000218831 843 ntBASIC30.48■■■□□ 2.47
Sdr42e1Q9D665 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Sdr42e1Q9D665 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Sdr42e1Q9D665 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Sdr42e1Q9D665 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Sdr42e1Q9D665 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Sdr42e1Q9D665 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Sdr42e1Q9D665 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.33■■■□□ 2.45
Sdr42e1Q9D665 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.28■■■□□ 2.44
Sdr42e1Q9D665 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sdr42e1Q9D665 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Sdr42e1Q9D665 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Sdr42e1Q9D665 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms