RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W YPP1P46951 817 aa9.47□□□□□ -0.89
PRE2YPR103W SAS4Q04003 481 aa9.47□□□□□ -0.89
PRE2YPR103W TEC1P18412 486 aa9.46□□□□□ -0.9
PRE2YPR103W SDH2P21801 266 aa9.45□□□□□ -0.9
PRE2YPR103W PUP1P25043 261 aa9.45□□□□□ -0.9
PRE2YPR103W FRA1Q07825 749 aa9.44□□□□□ -0.9
PRE2YPR103W GEF1P37020 779 aa9.43□□□□□ -0.9
PRE2YPR103W VRP1P37370 817 aa9.43□□□□□ -0.9
PRE2YPR103W RRD1P40454 393 aaKnown RBP9.43□□□□□ -0.9
PRE2YPR103W VAC17P25591 423 aa9.42□□□□□ -0.9
PRE2YPR103W GUT2P32191 649 aa9.42□□□□□ -0.9
PRE2YPR103W SIS2P36024 562 aa9.42□□□□□ -0.9
PRE2YPR103W YML083CQ04526 418 aa9.42□□□□□ -0.9
PRE2YPR103W TGL4P36165 910 aa9.41□□□□□ -0.9
PRE2YPR103W STE20Q03497 939 aaKnown RBP9.41□□□□□ -0.9
PRE2YPR103W APL6P46682 809 aa9.39□□□□□ -0.91
PRE2YPR103W ITT1Q04638 464 aa9.39□□□□□ -0.91
PRE2YPR103W KTR7P40504 517 aa9.36□□□□□ -0.91
PRE2YPR103W MRX12P47084 519 aa9.36□□□□□ -0.91
PRE2YPR103W ENV9Q08651 330 aa9.35□□□□□ -0.91
PRE2YPR103W MRF1P30775 413 aaPredicted RBP9.33□□□□□ -0.92
PRE2YPR103W CST6P40535 587 aa9.33□□□□□ -0.92
PRE2YPR103W PUS5Q06244 254 aa9.33□□□□□ -0.92
PRE2YPR103W SOH1P38633 127 aa9.32□□□□□ -0.92
PRE2YPR103W BDP1P46678 594 aa9.32□□□□□ -0.92
PRE2YPR103W ECM23Q02710 187 aa9.31□□□□□ -0.92
PRE2YPR103W BCK2P33306 851 aa9.3□□□□□ -0.92
PRE2YPR103W IXR1P33417 597 aa9.3□□□□□ -0.92
PRE2YPR103W GAL2P13181 574 aa9.29□□□□□ -0.92
PRE2YPR103W UTP13Q05946 817 aaKnown RBP9.29□□□□□ -0.92
PRE2YPR103W HAL5P38970 855 aaKnown RBP9.28□□□□□ -0.92
PRE2YPR103W ATG3P40344 310 aa9.28□□□□□ -0.92
PRE2YPR103W FRK1Q03002 865 aaPredicted RBP9.27□□□□□ -0.93
PRE2YPR103W SLX8P40072 274 aa9.26□□□□□ -0.93
PRE2YPR103W RPL34AP87262 121 aaPredicted RBP9.26□□□□□ -0.93
PRE2YPR103W KIP2P28743 706 aa9.25□□□□□ -0.93
PRE2YPR103W YML020WQ03722 664 aa9.25□□□□□ -0.93
PRE2YPR103W XDJ1P39102 459 aa9.24□□□□□ -0.93
PRE2YPR103W ISR1Q06098 443 aaKnown RBP9.24□□□□□ -0.93
PRE2YPR103W PHO87P25360 923 aa9.23□□□□□ -0.93
PRE2YPR103W UBX7P38349 436 aa9.23□□□□□ -0.93
PRE2YPR103W ACS2P52910 683 aaKnown RBP9.23□□□□□ -0.93
PRE2YPR103W EMW1P42842 904 aaKnown RBP9.22□□□□□ -0.93
PRE2YPR103W APP1P53933 587 aa9.22□□□□□ -0.93
PRE2YPR103W SYH1Q02875 849 aaKnown RBP9.22□□□□□ -0.93
PRE2YPR103W CDC3P32457 520 aaKnown RBP9.21□□□□□ -0.94
PRE2YPR103W ATG20Q07528 640 aa9.21□□□□□ -0.94
PRE2YPR103W NOP8Q08287 484 aaPredicted RBP9.21□□□□□ -0.94
PRE2YPR103W YEL077CQ3E7X8 1277 aa9.21□□□□□ -0.94
PRE2YPR103W ROM1P53046 1155 aa9.19□□□□□ -0.94
PRE2YPR103W CBC2Q08920 208 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
PRE2YPR103W HDA3Q06623 655 aa9.18□□□□□ -0.94
PRE2YPR103W TSC13Q99190 310 aa9.18□□□□□ -0.94
PRE2YPR103W HAP4P14064 554 aa9.17□□□□□ -0.94
PRE2YPR103W MIP1P15801 1254 aa9.17□□□□□ -0.94
PRE2YPR103W PDI1P17967 522 aaKnown RBP9.17□□□□□ -0.94
PRE2YPR103W AMS1P22855 1083 aa9.17□□□□□ -0.94
PRE2YPR103W MRT4P33201 236 aaKnown RBP9.16□□□□□ -0.94
PRE2YPR103W TPS3P38426 1054 aaKnown RBP9.16□□□□□ -0.94
PRE2YPR103W CLA4P48562 842 aa9.16□□□□□ -0.94
PRE2YPR103W RAS1P01119 309 aa9.14□□□□□ -0.95
PRE2YPR103W CWC15Q03772 175 aaKnown RBP9.14□□□□□ -0.95
PRE2YPR103W MKS1P34072 584 aa9.12□□□□□ -0.95
PRE2YPR103W AIM9P40053 627 aaKnown RBP9.12□□□□□ -0.95
PRE2YPR103W ISU1Q03020 165 aa9.12□□□□□ -0.95
PRE2YPR103W HED1Q03937 162 aa9.12□□□□□ -0.95
PRE2YPR103W GAS4Q08271 471 aa9.12□□□□□ -0.95
PRE2YPR103W SPT2P06843 333 aaPredicted RBP9.11□□□□□ -0.95
PRE2YPR103W FBP26P32604 452 aa9.11□□□□□ -0.95
PRE2YPR103W HAT1Q12341 374 aa9.11□□□□□ -0.95
PRE2YPR103W NTH2P35172 780 aa9.1□□□□□ -0.95
PRE2YPR103W YBL086CP38177 466 aa9.1□□□□□ -0.95
PRE2YPR103W SSF1P38789 453 aaPredicted RBP9.09□□□□□ -0.95
PRE2YPR103W YFL034WP43564 1073 aa9.09□□□□□ -0.95
PRE2YPR103W PUF6Q04373 656 aaKnown RBP9.09□□□□□ -0.95
PRE2YPR103W STE6P12866 1290 aa9.08□□□□□ -0.96
PRE2YPR103W DFG5Q05031 458 aa9.08□□□□□ -0.96
PRE2YPR103W MET32Q12041 191 aa9.08□□□□□ -0.96
PRE2YPR103W UTR2P32623 467 aa9.07□□□□□ -0.96
PRE2YPR103W SWI5P08153 709 aa9.05□□□□□ -0.96
PRE2YPR103W RPS6AP0CX37 236 aaKnown RBP9.05□□□□□ -0.96
PRE2YPR103W RPS6BP0CX38 236 aaPredicted RBP9.05□□□□□ -0.96
PRE2YPR103W SUV3P32580 737 aa9.05□□□□□ -0.96
PRE2YPR103W VAN1P23642 535 aa9.04□□□□□ -0.96
PRE2YPR103W AIR1P40507 360 aaKnown RBP9.03□□□□□ -0.96
PRE2YPR103W PNP1Q05788 311 aa9.03□□□□□ -0.96
PRE2YPR103W PUN1Q06991 263 aa9.03□□□□□ -0.96
PRE2YPR103W WTM2Q12206 467 aa9.03□□□□□ -0.96
PRE2YPR103W DAT1P13483 248 aaKnown RBP9.02□□□□□ -0.97
PRE2YPR103W UBP1P25037 809 aa9.02□□□□□ -0.97
PRE2YPR103W CYT1P07143 309 aa9.01□□□□□ -0.97
PRE2YPR103W SRS2P12954 1174 aa9.01□□□□□ -0.97
PRE2YPR103W ERP5P38819 212 aa9.01□□□□□ -0.97
PRE2YPR103W SEN54Q02825 467 aaPredicted RBP9.01□□□□□ -0.97
PRE2YPR103W YBL113CQ7M4S9 792 aa9.01□□□□□ -0.97
PRE2YPR103W BOL3P39724 118 aa9□□□□□ -0.97
PRE2YPR103W KAR5Q04746 504 aa9□□□□□ -0.97
PRE2YPR103W TRS33Q99394 268 aa9□□□□□ -0.97
PRE2YPR103W ALD4P46367 519 aaKnown RBP8.99□□□□□ -0.97
PRE2YPR103W BDS1Q08347 646 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms