RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	THI11	P47183	340 aa		4.47	□□□□□ -1.69
APL4	YPR029C	HOS2	P53096	452 aa	Predicted RBP	4.47	□□□□□ -1.69
APL4	YPR029C	THI13	Q07748	340 aa		4.47	□□□□□ -1.69
APL4	YPR029C	AI2	P03876	854 aa		4.46	□□□□□ -1.7
APL4	YPR029C	MET6	P05694	767 aa	Known RBP	4.46	□□□□□ -1.7
APL4	YPR029C	JNM1	P36224	373 aa		4.46	□□□□□ -1.7
APL4	YPR029C	GLO3	P38682	493 aa	Known RBP	4.46	□□□□□ -1.7
APL4	YPR029C	YEN1	P40028	759 aa		4.46	□□□□□ -1.7
APL4	YPR029C	MTC5	Q03897	1148 aa		4.46	□□□□□ -1.7
APL4	YPR029C	RNA1	P11745	407 aa	Known RBP	4.46	□□□□□ -1.7
APL4	YPR029C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	not detected
APL4	YPR029C	BUD6	P41697	788 aa		4.46	□□□□□ -1.7
APL4	YPR029C	BDP1	P46678	594 aa		4.46	□□□□□ -1.7
APL4	YPR029C	ALD6	P54115	500 aa	Known RBP	4.46	□□□□□ -1.7
APL4	YPR029C	GDE1	Q02979	1223 aa		4.46	□□□□□ -1.7
APL4	YPR029C	ATG16	Q03818	150 aa		4.46	□□□□□ -1.7
APL4	YPR029C	CDC53	Q12018	815 aa	Known RBP	4.46	□□□□□ -1.7
APL4	YPR029C	UBP14	P38237	781 aa	Known RBP	4.45	□□□□□ -1.7
APL4	YPR029C	DAK2	P43550	591 aa		4.45	□□□□□ -1.7
APL4	YPR029C	YDR341C	Q05506	607 aa	Known RBP	4.45	□□□□□ -1.7
APL4	YPR029C	WRS1	Q12109	432 aa	Known RBP	4.45	□□□□□ -1.7
APL4	YPR029C	TY1B-A	O13527	1196 aa	Known RBP	4.45	□□□□□ -1.7
APL4	YPR029C	CDC11	P32458	415 aa		4.45	□□□□□ -1.7
APL4	YPR029C	MAD1	P40957	749 aa		4.45	□□□□□ -1.7
APL4	YPR029C	YJR107W	P47145	328 aa		4.45	□□□□□ -1.7
APL4	YPR029C	ATG1	P53104	897 aa		4.45	□□□□□ -1.7
APL4	YPR029C	YNL108C	P53929	270 aa		4.45	□□□□□ -1.7
APL4	YPR029C	CSE4	P36012	229 aa		4.44	□□□□□ -1.7
APL4	YPR029C	TGL4	P36165	910 aa		4.44	□□□□□ -1.7
APL4	YPR029C	YGR021W	P53212	290 aa		4.44	□□□□□ -1.7
APL4	YPR029C	SXM1	Q04175	944 aa	Known RBP	4.44	□□□□□ -1.7
APL4	YPR029C	SPO20	Q04359	397 aa		4.44	□□□□□ -1.7
APL4	YPR029C	HSP42	Q12329	375 aa		4.44	□□□□□ -1.7
APL4	YPR029C	SEC27	P41811	889 aa	Known RBP	4.44	□□□□□ -1.7
APL4	YPR029C	SAS3	P34218	831 aa		4.43	□□□□□ -1.7
APL4	YPR029C	PRP3	Q03338	469 aa	Predicted RBP	4.43	□□□□□ -1.7
APL4	YPR029C	KAR5	Q04746	504 aa		4.43	□□□□□ -1.7
APL4	YPR029C	YLR326W	Q06170	240 aa	Known RBP	4.43	□□□□□ -1.7
APL4	YPR029C	WHI5	Q12416	295 aa		4.43	□□□□□ -1.7
APL4	YPR029C	VPS5	Q92331	675 aa		4.43	□□□□□ -1.7
APL4	YPR029C	YDJ1	P25491	409 aa	Known RBP	4.43	□□□□□ -1.7
APL4	YPR029C	RAD27	P26793	382 aa		4.43	□□□□□ -1.7
APL4	YPR029C	COQ8	P27697	501 aa		4.43	□□□□□ -1.7
APL4	YPR029C	MTC2	P34246	357 aa		4.43	□□□□□ -1.7
APL4	YPR029C	GRS1	P38088	690 aa	Known RBP	4.43	□□□□□ -1.7
APL4	YPR029C	PAF1	P38351	445 aa		4.43	□□□□□ -1.7
APL4	YPR029C	SPT2	P06843	333 aa	Predicted RBP	4.42	□□□□□ -1.7
APL4	YPR029C	VMA1	P17255	1071 aa	Known RBP	4.42	□□□□□ -1.7
APL4	YPR029C	CLN2	P20438	545 aa		4.42	□□□□□ -1.7
APL4	YPR029C	RCR1	P38212	213 aa		4.42	□□□□□ -1.7
APL4	YPR029C	HSE1	P38753	452 aa		4.42	□□□□□ -1.7
APL4	YPR029C	EMP47	P43555	445 aa		4.42	□□□□□ -1.7
APL4	YPR029C	TAF1	P46677	1066 aa		4.42	□□□□□ -1.7
APL4	YPR029C	YLR257W	Q06146	321 aa	Known RBP	4.42	□□□□□ -1.7
APL4	YPR029C	FOB1	O13329	566 aa		4.41	□□□□□ -1.7
APL4	YPR029C	INH1	P01097	85 aa		4.41	□□□□□ -1.7
APL4	YPR029C	SPS1	P08458	490 aa		4.41	□□□□□ -1.7
APL4	YPR029C	TRL1	P09880	827 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	BRF1	P29056	596 aa		4.41	□□□□□ -1.7
APL4	YPR029C	CRP1	P38845	465 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	FOL1	P53848	824 aa		4.41	□□□□□ -1.7
APL4	YPR029C	CTF4	Q01454	927 aa		4.41	□□□□□ -1.7
APL4	YPR029C	SRP1	Q02821	542 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	APL5	Q08951	932 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	MNL2	Q12205	849 aa		4.41	□□□□□ -1.7
APL4	YPR029C	TCB1	Q12466	1186 aa		4.41	□□□□□ -1.7
APL4	YPR029C	NOP58	Q12499	511 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	CYB2	P00175	591 aa		4.41	□□□□□ -1.7
APL4	YPR029C	SUP45	P12385	437 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	PPH3	P32345	308 aa		4.41	□□□□□ -1.7
APL4	YPR029C	SNF7	P39929	240 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	DJP1	P40564	432 aa		4.41	□□□□□ -1.7
APL4	YPR029C	GPI8	P49018	411 aa		4.41	□□□□□ -1.7
APL4	YPR029C	PEX8	P53248	589 aa		4.41	□□□□□ -1.7
APL4	YPR029C	VPS16	Q03308	798 aa		4.41	□□□□□ -1.7
APL4	YPR029C	ESF1	Q06344	628 aa	Known RBP	4.41	□□□□□ -1.7
APL4	YPR029C	YOR378W	Q08902	515 aa		4.41	□□□□□ -1.7
APL4	YPR029C	PIN2	Q12057	282 aa		4.41	□□□□□ -1.7
APL4	YPR029C	ENO1	P00924	437 aa	Known RBP	4.4	□□□□□ -1.7
APL4	YPR029C	RAD4	P14736	754 aa		4.4	□□□□□ -1.7
APL4	YPR029C	MDJ2	P42834	146 aa		4.4	□□□□□ -1.7
APL4	YPR029C	BBC1	P47068	1157 aa		4.4	□□□□□ -1.7
APL4	YPR029C	PRP43	P53131	767 aa	Known RBP	4.4	□□□□□ -1.7
APL4	YPR029C	BDF2	Q07442	638 aa		4.4	□□□□□ -1.7
APL4	YPR029C	GRC3	Q07845	632 aa		4.4	□□□□□ -1.7
APL4	YPR029C	SLX4	Q12098	748 aa		4.4	□□□□□ -1.7
APL4	YPR029C	RTP1	Q12751	981 aa		4.4	□□□□□ -1.7
APL4	YPR029C	SRM1	P21827	482 aa		4.4	□□□□□ -1.71
APL4	YPR029C	KTR1	P27810	393 aa	Known RBP	4.4	□□□□□ -1.71
APL4	YPR029C	YAP1801	P38856	637 aa		4.4	□□□□□ -1.71
APL4	YPR029C	VHR2	P40041	505 aa		4.4	□□□□□ -1.71
APL4	YPR029C	VID27	P40157	782 aa		4.4	□□□□□ -1.71
APL4	YPR029C	DAS1	P47005	663 aa		4.4	□□□□□ -1.71
APL4	YPR029C	RRI2	Q12348	645 aa		4.4	□□□□□ -1.71
APL4	YPR029C	NST1	P53935	1240 aa		4.39	□□□□□ -1.71
APL4	YPR029C	RCF1	Q03713	159 aa		4.39	□□□□□ -1.71
APL4	YPR029C	GRX3	Q03835	250 aa		4.39	□□□□□ -1.71
APL4	YPR029C	PUF6	Q04373	656 aa	Known RBP	4.39	□□□□□ -1.71
APL4	YPR029C	TMA7	Q3E764	64 aa	Known RBP	4.39	□□□□□ -1.71
APL4	YPR029C	ATP4	P05626	244 aa		4.39	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 144.4 ms