RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W CTF4Q01454 927 aa11.38□□□□□ -0.59
CTI6YPL181W GTT3P39996 337 aa11.35□□□□□ -0.59
CTI6YPL181W NUP145P49687 1317 aa11.35□□□□□ -0.59
CTI6YPL181W CTH1P47976 325 aa11.35□□□□□ -0.59
CTI6YPL181W ALD2P47771 506 aa11.34□□□□□ -0.59
CTI6YPL181W IOC4Q04213 475 aa11.34□□□□□ -0.59
CTI6YPL181W NTH2P35172 780 aa11.33□□□□□ -0.6
CTI6YPL181W UGA2P38067 497 aa11.33□□□□□ -0.6
CTI6YPL181W AOS1Q06624 347 aa11.33□□□□□ -0.6
CTI6YPL181W RIM15P43565 1770 aa11.33□□□□□ -0.6
CTI6YPL181W RTR1P40084 226 aaPredicted RBP11.32□□□□□ -0.6
CTI6YPL181W MSB4Q12317 492 aa11.32□□□□□ -0.6
CTI6YPL181W SSA2P10592 639 aaKnown RBP11.31□□□□□ -0.6
CTI6YPL181W YBP2P53169 641 aa11.31□□□□□ -0.6
CTI6YPL181W GRX1P25373 110 aaKnown RBP11.3□□□□□ -0.6
CTI6YPL181W PRD1P25375 712 aa11.3□□□□□ -0.6
CTI6YPL181W TUM1Q08686 304 aaKnown RBP11.29□□□□□ -0.6
CTI6YPL181W KCC4P25389 1037 aa11.27□□□□□ -0.61
CTI6YPL181W BDF1P35817 686 aa11.27□□□□□ -0.61
CTI6YPL181W RAD4P14736 754 aa11.26□□□□□ -0.61
CTI6YPL181W YNL050CP53952 270 aa11.26□□□□□ -0.61
CTI6YPL181W GRE2Q12068 342 aaKnown RBP11.26□□□□□ -0.61
CTI6YPL181W MPP10P47083 593 aaKnown RBP11.25□□□□□ -0.61
CTI6YPL181W RPG1P38249 964 aaKnown RBP11.24□□□□□ -0.61
CTI6YPL181W THI22Q06490 572 aa11.24□□□□□ -0.61
CTI6YPL181W YDL144CQ07589 356 aa11.23□□□□□ -0.61
CTI6YPL181W ALE1Q08548 619 aa11.23□□□□□ -0.61
CTI6YPL181W BUG1Q12191 341 aa11.23□□□□□ -0.61
CTI6YPL181W RMT2Q03305 412 aa11.22□□□□□ -0.61
CTI6YPL181W UGA3P26370 528 aa11.21□□□□□ -0.61
CTI6YPL181W ALD3P54114 506 aa11.21□□□□□ -0.61
CTI6YPL181W ZDS1P50111 915 aaKnown RBP11.19□□□□□ -0.62
CTI6YPL181W NSE3Q05541 303 aa11.19□□□□□ -0.62
CTI6YPL181W UTP22P53254 1237 aaPredicted RBP11.19□□□□□ -0.62
CTI6YPL181W RTT109Q07794 436 aa11.19□□□□□ -0.62
CTI6YPL181W NOP53Q12080 455 aaKnown RBP11.19□□□□□ -0.62
CTI6YPL181W MAM1P40065 302 aa11.17□□□□□ -0.62
CTI6YPL181W TOS1P38288 455 aa11.16□□□□□ -0.62
CTI6YPL181W NYV1Q12255 253 aa11.16□□□□□ -0.62
CTI6YPL181W RRT14P40470 206 aa11.15□□□□□ -0.62
CTI6YPL181W BUD27P43573 796 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
CTI6YPL181W SAP155P43612 1002 aa11.15□□□□□ -0.62
CTI6YPL181W TEA1P47988 759 aa11.15□□□□□ -0.62
CTI6YPL181W HEF3P53978 1044 aaKnown RBP11.15□□□□□ -0.62
CTI6YPL181W BMS1Q08965 1183 aaKnown RBP11.15□□□□□ -0.62
CTI6YPL181W TPD3P31383 635 aa11.14□□□□□ -0.63
CTI6YPL181W COQ4O13525 335 aa11.14□□□□□ -0.63
CTI6YPL181W MDG1P53885 366 aa11.14□□□□□ -0.63
CTI6YPL181W PHM7Q12252 991 aa11.14□□□□□ -0.63
CTI6YPL181W RPP0P05317 312 aaKnown RBP11.13□□□□□ -0.63
CTI6YPL181W YBR287WP38355 427 aa11.13□□□□□ -0.63
CTI6YPL181W GYP7P48365 746 aa11.13□□□□□ -0.63
CTI6YPL181W LYS2P07702 1392 aa11.13□□□□□ -0.63
CTI6YPL181W HPC2Q01448 625 aa11.12□□□□□ -0.63
CTI6YPL181W SSP2Q08646 371 aa11.12□□□□□ -0.63
CTI6YPL181W SER1P33330 395 aaKnown RBP11.11□□□□□ -0.63
CTI6YPL181W RIX7Q07844 837 aaKnown RBP11.11□□□□□ -0.63
CTI6YPL181W SUI2P20459 304 aaKnown RBP11.1□□□□□ -0.63
CTI6YPL181W VPS27P40343 622 aaKnown RBP11.09□□□□□ -0.63
CTI6YPL181W YFR016CP43597 1233 aaKnown RBP11.09□□□□□ -0.63
CTI6YPL181W YGL082WP53155 381 aa11.09□□□□□ -0.63
CTI6YPL181W ZDS2P54786 942 aa11.09□□□□□ -0.63
CTI6YPL181W CTI6Q08923 506 aa11.09□□□□□ -0.63
CTI6YPL181W ARG8P18544 423 aa11.08□□□□□ -0.64
CTI6YPL181W YOL057WQ08225 711 aa11.07□□□□□ -0.64
CTI6YPL181W UTP10P42945 1769 aaKnown RBP11.07□□□□□ -0.64
CTI6YPL181W DCD1P06773 312 aa11.06□□□□□ -0.64
CTI6YPL181W APL2P36000 726 aaPredicted RBP11.06□□□□□ -0.64
CTI6YPL181W EAF6P47128 113 aa11.06□□□□□ -0.64
CTI6YPL181W SRT1Q03175 343 aa11.06□□□□□ -0.64
CTI6YPL181W YPR204WQ08995 1032 aa11.06□□□□□ -0.64
CTI6YPL181W LPD1P09624 499 aaKnown RBP11.05□□□□□ -0.64
CTI6YPL181W CDC45Q08032 650 aa11.05□□□□□ -0.64
CTI6YPL181W VPS64Q03944 604 aa11.04□□□□□ -0.64
CTI6YPL181W MSN5P52918 1224 aa11.04□□□□□ -0.64
CTI6YPL181W RAT1Q02792 1006 aaKnown RBP11.02□□□□□ -0.65
CTI6YPL181W RVB2Q12464 471 aaKnown RBP11.02□□□□□ -0.65
CTI6YPL181W SSA1P10591 642 aaKnown RBP11.01□□□□□ -0.65
CTI6YPL181W DNM1P54861 757 aa11.01□□□□□ -0.65
CTI6YPL181W NSR1P27476 414 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
CTI6YPL181W PRS1P32895 427 aaKnown RBP10.99□□□□□ -0.65
CTI6YPL181W ERT1P38140 529 aa10.99□□□□□ -0.65
CTI6YPL181W YDR306CQ06640 478 aa10.99□□□□□ -0.65
CTI6YPL181W YKL222CP35995 705 aa10.99□□□□□ -0.65
CTI6YPL181W CTT1P06115 562 aa10.98□□□□□ -0.65
CTI6YPL181W CST6P40535 587 aa10.98□□□□□ -0.65
CTI6YPL181W CWH41P53008 833 aa10.98□□□□□ -0.65
CTI6YPL181W YLR271WQ06152 274 aa10.98□□□□□ -0.65
CTI6YPL181W SWI1P09547 1314 aa10.97□□□□□ -0.65
CTI6YPL181W PFF1P38244 976 aa10.97□□□□□ -0.65
CTI6YPL181W KIN4Q01919 800 aa10.97□□□□□ -0.65
CTI6YPL181W BDF2Q07442 638 aa10.97□□□□□ -0.65
CTI6YPL181W MRP7P12687 371 aa10.96□□□□□ -0.65
CTI6YPL181W YJR008WP47085 338 aa10.96□□□□□ -0.65
CTI6YPL181W YRB30P53107 440 aaPredicted RBP10.96□□□□□ -0.65
CTI6YPL181W DIB1Q06819 143 aaPredicted RBP10.96□□□□□ -0.65
CTI6YPL181W NUP133P36161 1157 aa10.95□□□□□ -0.66
CTI6YPL181W DMA1P38823 416 aa10.95□□□□□ -0.66
CTI6YPL181W YGR122WP53272 402 aa10.95□□□□□ -0.66
CTI6YPL181W PKH1Q03407 766 aa10.95□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms