RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C AIM7Q12156 149 aa7.68□□□□□ -1.18
CUP9YPL177C GLY1P37303 387 aaKnown RBP7.67□□□□□ -1.18
CUP9YPL177C YLR346CQ06139 101 aa7.67□□□□□ -1.18
CUP9YPL177C YBL086CP38177 466 aa7.66□□□□□ -1.18
CUP9YPL177C PKH3Q03306 898 aaPredicted RBP7.66□□□□□ -1.18
CUP9YPL177C AAD14P42884 376 aa7.63□□□□□ -1.19
CUP9YPL177C ITT1Q04638 464 aa7.63□□□□□ -1.19
CUP9YPL177C EMW1P42842 904 aaKnown RBP7.62□□□□□ -1.19
CUP9YPL177C TY1A-BLQ12266 440 aa7.62□□□□□ -1.19
CUP9YPL177C MIP1P15801 1254 aa7.61□□□□□ -1.19
CUP9YPL177C SCW11P53189 542 aa7.61□□□□□ -1.19
CUP9YPL177C ARG82P07250 355 aa7.6□□□□□ -1.19
CUP9YPL177C YIR007WP40566 764 aa7.6□□□□□ -1.19
CUP9YPL177C APP1P53933 587 aa7.6□□□□□ -1.19
CUP9YPL177C ARG8P18544 423 aa7.59□□□□□ -1.19
CUP9YPL177C FIG4P42837 879 aa7.59□□□□□ -1.19
CUP9YPL177C CSN12P47130 423 aa7.59□□□□□ -1.19
CUP9YPL177C LSC2P53312 427 aa7.58□□□□□ -1.2
CUP9YPL177C YJR098CP47139 656 aa7.56□□□□□ -1.2
CUP9YPL177C RAD59Q12223 238 aa7.56□□□□□ -1.2
CUP9YPL177C DLD1P32891 587 aa7.54□□□□□ -1.2
CUP9YPL177C YGR035CP53222 116 aa7.54□□□□□ -1.2
CUP9YPL177C YPR084WQ06821 456 aa7.53□□□□□ -1.2
CUP9YPL177C TRK2P28584 889 aa7.52□□□□□ -1.21
CUP9YPL177C UBP2Q01476 1272 aa7.52□□□□□ -1.21
CUP9YPL177C HPF1Q05164 967 aa7.52□□□□□ -1.21
CUP9YPL177C TCB1Q12466 1186 aa7.52□□□□□ -1.21
CUP9YPL177C TEC1P18412 486 aa7.5□□□□□ -1.21
CUP9YPL177C MKS1P34072 584 aa7.5□□□□□ -1.21
CUP9YPL177C DFG5Q05031 458 aa7.5□□□□□ -1.21
CUP9YPL177C ROG3P43602 733 aa7.47□□□□□ -1.21
CUP9YPL177C OSH7P38755 437 aa7.46□□□□□ -1.22
CUP9YPL177C TY1A-MR1Q04215 440 aa7.46□□□□□ -1.22
CUP9YPL177C CCP1P00431 361 aa7.45□□□□□ -1.22
CUP9YPL177C MAK16P10962 306 aaPredicted RBP7.45□□□□□ -1.22
CUP9YPL177C FBP26P32604 452 aa7.45□□□□□ -1.22
CUP9YPL177C SSA2P10592 639 aaKnown RBP7.43□□□□□ -1.22
CUP9YPL177C STE6P12866 1290 aa7.43□□□□□ -1.22
CUP9YPL177C KIN1P13185 1064 aa7.43□□□□□ -1.22
CUP9YPL177C LEU3P08638 886 aa7.42□□□□□ -1.22
CUP9YPL177C BDS1Q08347 646 aa7.42□□□□□ -1.22
CUP9YPL177C GUT2P32191 649 aa7.4□□□□□ -1.22
CUP9YPL177C MTC5Q03897 1148 aa7.4□□□□□ -1.22
CUP9YPL177C CDC19P00549 500 aaKnown RBP7.39□□□□□ -1.23
CUP9YPL177C NAF1P53919 492 aaKnown RBP7.39□□□□□ -1.23
CUP9YPL177C NAM8Q00539 523 aaKnown RBP7.38□□□□□ -1.23
CUP9YPL177C DPH6Q12429 685 aa7.38□□□□□ -1.23
CUP9YPL177C VTC4P47075 721 aa7.37□□□□□ -1.23
CUP9YPL177C FRA1Q07825 749 aa7.37□□□□□ -1.23
CUP9YPL177C ISU1Q03020 165 aa7.36□□□□□ -1.23
CUP9YPL177C ATG20Q07528 640 aa7.36□□□□□ -1.23
CUP9YPL177C YPR204WQ08995 1032 aa7.36□□□□□ -1.23
CUP9YPL177C LYS5P50113 272 aa7.34□□□□□ -1.23
CUP9YPL177C JJJ3P47138 172 aa7.33□□□□□ -1.24
CUP9YPL177C STE20Q03497 939 aaKnown RBP7.33□□□□□ -1.24
CUP9YPL177C LEO1P38439 464 aa7.32□□□□□ -1.24
CUP9YPL177C GUA1P38625 525 aaKnown RBP7.32□□□□□ -1.24
CUP9YPL177C DAL1P32375 460 aa7.3□□□□□ -1.24
CUP9YPL177C APL6P46682 809 aa7.3□□□□□ -1.24
CUP9YPL177C CSE4P36012 229 aa7.29□□□□□ -1.24
CUP9YPL177C ICP55P40051 511 aa7.28□□□□□ -1.24
CUP9YPL177C DLD3P39976 496 aaKnown RBP7.27□□□□□ -1.25
CUP9YPL177C CUZ1P53899 274 aa7.27□□□□□ -1.25
CUP9YPL177C MCM16Q12262 181 aa7.27□□□□□ -1.25
CUP9YPL177C RPP2BP02400 110 aaKnown RBP7.26□□□□□ -1.25
CUP9YPL177C RPN1P38764 993 aaKnown RBP7.26□□□□□ -1.25
CUP9YPL177C MRX12P47084 519 aa7.26□□□□□ -1.25
CUP9YPL177C SPT5P27692 1063 aaKnown RBP7.25□□□□□ -1.25
CUP9YPL177C EMP47P43555 445 aa7.25□□□□□ -1.25
CUP9YPL177C WTM2Q12206 467 aa7.25□□□□□ -1.25
CUP9YPL177C SPT2P06843 333 aaPredicted RBP7.24□□□□□ -1.25
CUP9YPL177C ISF1P32488 338 aa7.24□□□□□ -1.25
CUP9YPL177C HPC2Q01448 625 aa7.24□□□□□ -1.25
CUP9YPL177C ISR1Q06098 443 aaKnown RBP7.24□□□□□ -1.25
CUP9YPL177C PHM7Q12252 991 aa7.24□□□□□ -1.25
CUP9YPL177C SLA1P32790 1244 aa7.23□□□□□ -1.25
CUP9YPL177C MDJ1P35191 511 aa7.23□□□□□ -1.25
CUP9YPL177C PUS1Q12211 544 aaKnown RBP7.23□□□□□ -1.25
CUP9YPL177C SSN3P39073 555 aa7.22□□□□□ -1.25
CUP9YPL177C MSN5P52918 1224 aa7.22□□□□□ -1.25
CUP9YPL177C TY1A-DR3Q12441 440 aa7.22□□□□□ -1.25
CUP9YPL177C YBL036CP38197 257 aa7.21□□□□□ -1.26
CUP9YPL177C HAL5P38970 855 aaKnown RBP7.21□□□□□ -1.26
CUP9YPL177C UBP15P50101 1230 aa7.21□□□□□ -1.26
CUP9YPL177C YDJ1P25491 409 aaKnown RBP7.2□□□□□ -1.26
CUP9YPL177C UTR2P32623 467 aa7.2□□□□□ -1.26
CUP9YPL177C CEM1P39525 442 aa7.19□□□□□ -1.26
CUP9YPL177C YFL066CP43538 392 aa7.19□□□□□ -1.26
CUP9YPL177C DAT1P13483 248 aaKnown RBP7.17□□□□□ -1.26
CUP9YPL177C DIT1P21623 536 aa7.17□□□□□ -1.26
CUP9YPL177C LSB3P43603 459 aaKnown RBP7.17□□□□□ -1.26
CUP9YPL177C NSG2P53898 299 aa7.17□□□□□ -1.26
CUP9YPL177C SYT1Q06836 1226 aa7.17□□□□□ -1.26
CUP9YPL177C BIO2P32451 375 aa7.16□□□□□ -1.26
CUP9YPL177C TFB3Q03290 321 aa7.16□□□□□ -1.26
CUP9YPL177C AI1P03875 834 aa7.15□□□□□ -1.26
CUP9YPL177C BRL1P38770 471 aa7.15□□□□□ -1.26
CUP9YPL177C YMR265CQ03508 461 aaKnown RBP7.15□□□□□ -1.26
CUP9YPL177C PKC1P24583 1151 aa7.14□□□□□ -1.27
CUP9YPL177C UTP13Q05946 817 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms