RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	YIL092W	P40497	633 aa		13.13	□□□□□ -0.31
HHO1	YPL127C	RRT14	P40470	206 aa		13.11	□□□□□ -0.31
HHO1	YPL127C	ENV9	Q08651	330 aa		13.11	□□□□□ -0.31
HHO1	YPL127C	EDE1	P34216	1381 aa		13.09	□□□□□ -0.31
HHO1	YPL127C	UGA3	P26370	528 aa		13.09	□□□□□ -0.31
HHO1	YPL127C	DAL5	P15365	543 aa		13.08	□□□□□ -0.32
HHO1	YPL127C	IES2	P40154	320 aa		13.08	□□□□□ -0.32
HHO1	YPL127C	NSE3	Q05541	303 aa		13.08	□□□□□ -0.32
HHO1	YPL127C	MEC3	Q02574	474 aa		13.07	□□□□□ -0.32
HHO1	YPL127C	KCC4	P25389	1037 aa		13.06	□□□□□ -0.32
HHO1	YPL127C	APP1	P53933	587 aa		13.06	□□□□□ -0.32
HHO1	YPL127C	BMS1	Q08965	1183 aa	Known RBP	13.06	□□□□□ -0.32
HHO1	YPL127C	SRT1	Q03175	343 aa		13.05	□□□□□ -0.32
HHO1	YPL127C	INP54	Q08227	384 aa	Known RBP	13.05	□□□□□ -0.32
HHO1	YPL127C	NUP145	P49687	1317 aa		13.05	□□□□□ -0.32
HHO1	YPL127C	POL32	P47110	350 aa		13.02	□□□□□ -0.33
HHO1	YPL127C	YRF1-3	P0CX14	1859 aa		13.02	□□□□□ -0.33
HHO1	YPL127C	YRF1-7	P0CX15	1859 aa		13.02	□□□□□ -0.33
HHO1	YPL127C	YRF1-6	P53819	1859 aa		13.02	□□□□□ -0.33
HHO1	YPL127C	COQ4	O13525	335 aa		13.01	□□□□□ -0.33
HHO1	YPL127C	YKL133C	P36066	463 aa		13.01	□□□□□ -0.33
HHO1	YPL127C	IMH1	Q06704	911 aa	Known RBP	13.01	□□□□□ -0.33
HHO1	YPL127C	LYS2	P07702	1392 aa		13.01	□□□□□ -0.33
HHO1	YPL127C	OSM1	P21375	501 aa	Known RBP	13	□□□□□ -0.33
HHO1	YPL127C	YBR287W	P38355	427 aa		12.99	□□□□□ -0.33
HHO1	YPL127C	YPP1	P46951	817 aa		12.99	□□□□□ -0.33
HHO1	YPL127C	ADE16	P54113	591 aa	Known RBP	12.99	□□□□□ -0.33
HHO1	YPL127C	YOL057W	Q08225	711 aa		12.97	□□□□□ -0.33
HHO1	YPL127C	ROM2	P51862	1356 aa	Known RBP	12.96	□□□□□ -0.33
HHO1	YPL127C	PUF6	Q04373	656 aa	Known RBP	12.95	□□□□□ -0.34
HHO1	YPL127C	ATG13	Q06628	738 aa		12.95	□□□□□ -0.34
HHO1	YPL127C	RPC31	P17890	251 aa		12.94	□□□□□ -0.34
HHO1	YPL127C	TRP5	P00931	707 aa	Known RBP	12.93	□□□□□ -0.34
HHO1	YPL127C	RPS19A	P07280	144 aa	Known RBP	12.93	□□□□□ -0.34
HHO1	YPL127C	RPS19B	P07281	144 aa	Predicted RBP	12.93	□□□□□ -0.34
HHO1	YPL127C	RAD4	P14736	754 aa		12.93	□□□□□ -0.34
HHO1	YPL127C	YBP2	P53169	641 aa		12.91	□□□□□ -0.34
HHO1	YPL127C	FRK1	Q03002	865 aa	Predicted RBP	12.91	□□□□□ -0.34
HHO1	YPL127C	CSI1	Q04368	295 aa		12.91	□□□□□ -0.34
HHO1	YPL127C	DOT5	P40553	215 aa		12.9	□□□□□ -0.34
HHO1	YPL127C	NOP8	Q08287	484 aa	Predicted RBP	12.9	□□□□□ -0.34
HHO1	YPL127C	ALE1	Q08548	619 aa		12.9	□□□□□ -0.34
HHO1	YPL127C	YDR306C	Q06640	478 aa		12.89	□□□□□ -0.35
HHO1	YPL127C	YNG2	P38806	282 aa	Known RBP	12.88	□□□□□ -0.35
HHO1	YPL127C	RMT2	Q03305	412 aa		12.88	□□□□□ -0.35
HHO1	YPL127C	MRP7	P12687	371 aa		12.87	□□□□□ -0.35
HHO1	YPL127C	YIL055C	P40523	627 aa	Known RBP	12.87	□□□□□ -0.35
HHO1	YPL127C	DNM1	P54861	757 aa		12.87	□□□□□ -0.35
HHO1	YPL127C	FOX2	Q02207	900 aa	Known RBP	12.86	□□□□□ -0.35
HHO1	YPL127C	ECM16	Q04217	1267 aa	Known RBP	12.86	□□□□□ -0.35
HHO1	YPL127C	COB	P00163	385 aa		12.85	□□□□□ -0.35
HHO1	YPL127C	GRX1	P25373	110 aa	Known RBP	12.84	□□□□□ -0.35
HHO1	YPL127C	CST6	P40535	587 aa		12.84	□□□□□ -0.35
HHO1	YPL127C	YJR008W	P47085	338 aa		12.84	□□□□□ -0.35
HHO1	YPL127C	NOP53	Q12080	455 aa	Known RBP	12.84	□□□□□ -0.35
HHO1	YPL127C	RAD24	P32641	659 aa		12.83	□□□□□ -0.36
HHO1	YPL127C	HGH1	P48362	394 aa	Known RBP	12.83	□□□□□ -0.36
HHO1	YPL127C	MDG1	P53885	366 aa		12.82	□□□□□ -0.36
HHO1	YPL127C	ZDS2	P54786	942 aa		12.82	□□□□□ -0.36
HHO1	YPL127C	SSP2	Q08646	371 aa		12.82	□□□□□ -0.36
HHO1	YPL127C	YKR075C	P36155	307 aa		12.81	□□□□□ -0.36
HHO1	YPL127C	SPO1	P53541	631 aa		12.81	□□□□□ -0.36
HHO1	YPL127C	LAM6	Q08001	693 aa		12.81	□□□□□ -0.36
HHO1	YPL127C	BOI2	P39969	1040 aa		12.8	□□□□□ -0.36
HHO1	YPL127C	YGR122W	P53272	402 aa		12.8	□□□□□ -0.36
HHO1	YPL127C	TUM1	Q08686	304 aa	Known RBP	12.8	□□□□□ -0.36
HHO1	YPL127C	GCD7	P32502	381 aa	Predicted RBP	12.79	□□□□□ -0.36
HHO1	YPL127C	ILV3	P39522	585 aa	Known RBP	12.79	□□□□□ -0.36
HHO1	YPL127C	PHM7	Q12252	991 aa		12.79	□□□□□ -0.36
HHO1	YPL127C	YIR014W	P40570	242 aa		12.78	□□□□□ -0.36
HHO1	YPL127C	NUP133	P36161	1157 aa		12.77	□□□□□ -0.37
HHO1	YPL127C	SWI1	P09547	1314 aa		12.77	□□□□□ -0.37
HHO1	YPL127C	SWC3	P31376	625 aa		12.75	□□□□□ -0.37
HHO1	YPL127C	PRP40	P33203	583 aa	Known RBP	12.75	□□□□□ -0.37
HHO1	YPL127C	VPS64	Q03944	604 aa		12.75	□□□□□ -0.37
HHO1	YPL127C	YPR204W	Q08995	1032 aa		12.75	□□□□□ -0.37
HHO1	YPL127C	NMD2	P38798	1089 aa	Known RBP	12.74	□□□□□ -0.37
HHO1	YPL127C	YJL181W	P46987	611 aa		12.74	□□□□□ -0.37
HHO1	YPL127C	SET1	P38827	1080 aa	Known RBP	12.73	□□□□□ -0.37
HHO1	YPL127C	UBP12	P39538	1254 aa		12.73	□□□□□ -0.37
HHO1	YPL127C	YLR271W	Q06152	274 aa		12.73	□□□□□ -0.37
HHO1	YPL127C	LPD1	P09624	499 aa	Known RBP	12.72	□□□□□ -0.37
HHO1	YPL127C	RFC1	P38630	861 aa	Known RBP	12.72	□□□□□ -0.37
HHO1	YPL127C	DMA1	P38823	416 aa		12.72	□□□□□ -0.37
HHO1	YPL127C	RPN11	P43588	306 aa	Known RBP	12.72	□□□□□ -0.37
HHO1	YPL127C	NKP2	Q06162	153 aa		12.72	□□□□□ -0.37
HHO1	YPL127C	MSB4	Q12317	492 aa		12.72	□□□□□ -0.37
HHO1	YPL127C	ARG8	P18544	423 aa		12.71	□□□□□ -0.37
HHO1	YPL127C	APL2	P36000	726 aa	Predicted RBP	12.71	□□□□□ -0.37
HHO1	YPL127C	YMR074C	Q04773	145 aa		12.71	□□□□□ -0.37
HHO1	YPL127C	RIM15	P43565	1770 aa		12.71	□□□□□ -0.38
HHO1	YPL127C	RAD50	P12753	1312 aa		12.7	□□□□□ -0.38
HHO1	YPL127C	CDC16	P09798	840 aa		12.7	□□□□□ -0.38
HHO1	YPL127C	SSF1	P38789	453 aa	Predicted RBP	12.68	□□□□□ -0.38
HHO1	YPL127C	OPY1	P38271	328 aa		12.67	□□□□□ -0.38
HHO1	YPL127C	TEA1	P47988	759 aa		12.67	□□□□□ -0.38
HHO1	YPL127C	GRE2	Q12068	342 aa	Known RBP	12.67	□□□□□ -0.38
HHO1	YPL127C	SUP35	P05453	685 aa	Known RBP	12.66	□□□□□ -0.38
HHO1	YPL127C	DCD1	P06773	312 aa		12.66	□□□□□ -0.38
HHO1	YPL127C	NPR2	P39923	615 aa		12.66	□□□□□ -0.38

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms