RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C TRM1P15565 570 aaKnown RBP8.42□□□□□ -1.06
RPN8YOR261C RAD59Q12223 238 aa8.42□□□□□ -1.06
RPN8YOR261C PKC1P24583 1151 aa8.4□□□□□ -1.06
RPN8YOR261C TRK2P28584 889 aa8.4□□□□□ -1.06
RPN8YOR261C BRL1P38770 471 aa8.4□□□□□ -1.06
RPN8YOR261C ARG8P18544 423 aa8.39□□□□□ -1.07
RPN8YOR261C YIR007WP40566 764 aa8.39□□□□□ -1.07
RPN8YOR261C YGR035CP53222 116 aa8.37□□□□□ -1.07
RPN8YOR261C SRF1Q12516 437 aa8.37□□□□□ -1.07
RPN8YOR261C HGH1P48362 394 aaKnown RBP8.36□□□□□ -1.07
RPN8YOR261C TBF1Q02457 562 aa8.36□□□□□ -1.07
RPN8YOR261C HPF1Q05164 967 aa8.36□□□□□ -1.07
RPN8YOR261C YLR346CQ06139 101 aa8.36□□□□□ -1.07
RPN8YOR261C GLY1P37303 387 aaKnown RBP8.35□□□□□ -1.07
RPN8YOR261C RPA14P50106 137 aa8.35□□□□□ -1.07
RPN8YOR261C YDL206WQ12424 762 aa8.35□□□□□ -1.07
RPN8YOR261C MRT4P33201 236 aaKnown RBP8.34□□□□□ -1.07
RPN8YOR261C NUP85P46673 744 aa8.34□□□□□ -1.07
RPN8YOR261C YPR097WQ06839 1073 aa8.34□□□□□ -1.07
RPN8YOR261C KIP2P28743 706 aa8.33□□□□□ -1.08
RPN8YOR261C TY1A-BLQ12266 440 aa8.33□□□□□ -1.08
RPN8YOR261C CSE4P36012 229 aa8.32□□□□□ -1.08
RPN8YOR261C IXR1P33417 597 aa8.31□□□□□ -1.08
RPN8YOR261C YBL036CP38197 257 aa8.3□□□□□ -1.08
RPN8YOR261C SCW11P53189 542 aa8.3□□□□□ -1.08
RPN8YOR261C ALR1Q08269 859 aa8.3□□□□□ -1.08
RPN8YOR261C MAK16P10962 306 aaPredicted RBP8.29□□□□□ -1.08
RPN8YOR261C MIP1P15801 1254 aa8.28□□□□□ -1.08
RPN8YOR261C YJL007CP47080 104 aa8.25□□□□□ -1.09
RPN8YOR261C BIM1P40013 344 aa8.23□□□□□ -1.09
RPN8YOR261C BIO2P32451 375 aa8.22□□□□□ -1.09
RPN8YOR261C YDJ1P25491 409 aaKnown RBP8.2□□□□□ -1.1
RPN8YOR261C SPT5P27692 1063 aaKnown RBP8.2□□□□□ -1.1
RPN8YOR261C ATG32P40458 529 aa8.2□□□□□ -1.1
RPN8YOR261C NAF1P53919 492 aaKnown RBP8.2□□□□□ -1.1
RPN8YOR261C SUP45P12385 437 aaKnown RBP8.19□□□□□ -1.1
RPN8YOR261C FIG4P42837 879 aa8.19□□□□□ -1.1
RPN8YOR261C AAD14P42884 376 aa8.19□□□□□ -1.1
RPN8YOR261C VAC17P25591 423 aa8.18□□□□□ -1.1
RPN8YOR261C RTT106P40161 455 aa8.18□□□□□ -1.1
RPN8YOR261C YNL108CP53929 270 aa8.18□□□□□ -1.1
RPN8YOR261C DLD1P32891 587 aa8.16□□□□□ -1.1
RPN8YOR261C YBL086CP38177 466 aa8.16□□□□□ -1.1
RPN8YOR261C LSC2P53312 427 aa8.16□□□□□ -1.1
RPN8YOR261C ITT1Q04638 464 aa8.16□□□□□ -1.1
RPN8YOR261C ARG82P07250 355 aa8.15□□□□□ -1.1
RPN8YOR261C TIF1P10081 395 aaKnown RBP8.15□□□□□ -1.1
RPN8YOR261C YJR098CP47139 656 aa8.15□□□□□ -1.1
RPN8YOR261C UBP2Q01476 1272 aa8.15□□□□□ -1.1
RPN8YOR261C YPR084WQ06821 456 aa8.15□□□□□ -1.1
RPN8YOR261C TEC1P18412 486 aa8.14□□□□□ -1.11
RPN8YOR261C ICP55P40051 511 aa8.13□□□□□ -1.11
RPN8YOR261C TCB1Q12466 1186 aa8.13□□□□□ -1.11
RPN8YOR261C CCP1P00431 361 aa8.12□□□□□ -1.11
RPN8YOR261C ENO2P00925 437 aaKnown RBP8.12□□□□□ -1.11
RPN8YOR261C ROG3P43602 733 aa8.12□□□□□ -1.11
RPN8YOR261C GUT2P32191 649 aa8.11□□□□□ -1.11
RPN8YOR261C TY1A-MR1Q04215 440 aa8.11□□□□□ -1.11
RPN8YOR261C TAF7Q05021 590 aa8.11□□□□□ -1.11
RPN8YOR261C YPR204WQ08995 1032 aa8.11□□□□□ -1.11
RPN8YOR261C MCM16Q12262 181 aa8.11□□□□□ -1.11
RPN8YOR261C OSH7P38755 437 aa8.09□□□□□ -1.11
RPN8YOR261C RPL34BP40525 121 aaKnown RBP8.09□□□□□ -1.11
RPN8YOR261C LSB3P43603 459 aaKnown RBP8.09□□□□□ -1.11
RPN8YOR261C APP1P53933 587 aa8.09□□□□□ -1.11
RPN8YOR261C FRA1Q07825 749 aa8.09□□□□□ -1.11
RPN8YOR261C RTG2P32608 588 aaKnown RBP8.08□□□□□ -1.12
RPN8YOR261C STE20Q03497 939 aaKnown RBP8.08□□□□□ -1.12
RPN8YOR261C RLF2Q12495 606 aa8.08□□□□□ -1.12
RPN8YOR261C ISF1P32488 338 aa8.07□□□□□ -1.12
RPN8YOR261C EMP47P43555 445 aa8.07□□□□□ -1.12
RPN8YOR261C RIM21P48565 533 aa8.07□□□□□ -1.12
RPN8YOR261C MRX10Q05648 414 aa8.07□□□□□ -1.12
RPN8YOR261C MDJ1P35191 511 aa8.06□□□□□ -1.12
RPN8YOR261C YPP1P46951 817 aa8.06□□□□□ -1.12
RPN8YOR261C PUS1Q12211 544 aaKnown RBP8.06□□□□□ -1.12
RPN8YOR261C DPH6Q12429 685 aa8.06□□□□□ -1.12
RPN8YOR261C EMW1P42842 904 aaKnown RBP8.04□□□□□ -1.12
RPN8YOR261C MRX12P47084 519 aa8.04□□□□□ -1.12
RPN8YOR261C ENO1P00924 437 aaKnown RBP8.03□□□□□ -1.12
RPN8YOR261C APL6P46682 809 aa8.03□□□□□ -1.12
RPN8YOR261C RDS2P19541 446 aaKnown RBP8.02□□□□□ -1.13
RPN8YOR261C JJJ3P47138 172 aa7.98□□□□□ -1.13
RPN8YOR261C LYS5P50113 272 aa7.98□□□□□ -1.13
RPN8YOR261C NAM8Q00539 523 aaKnown RBP7.98□□□□□ -1.13
RPN8YOR261C PHM7Q12252 991 aa7.98□□□□□ -1.13
RPN8YOR261C PEP12P32854 288 aa7.96□□□□□ -1.14
RPN8YOR261C TTI1P36097 1038 aa7.96□□□□□ -1.14
RPN8YOR261C UTP13Q05946 817 aaKnown RBP7.96□□□□□ -1.14
RPN8YOR261C DFG5Q05031 458 aa7.95□□□□□ -1.14
RPN8YOR261C ATG20Q07528 640 aa7.95□□□□□ -1.14
RPN8YOR261C SOH1P38633 127 aa7.94□□□□□ -1.14
RPN8YOR261C ATG3P40344 310 aa7.94□□□□□ -1.14
RPN8YOR261C CDC19P00549 500 aaKnown RBP7.92□□□□□ -1.14
RPN8YOR261C MKS1P34072 584 aa7.92□□□□□ -1.14
RPN8YOR261C YFL066CP43538 392 aa7.92□□□□□ -1.14
RPN8YOR261C ISR1Q06098 443 aaKnown RBP7.92□□□□□ -1.14
RPN8YOR261C FBP26P32604 452 aa7.91□□□□□ -1.14
RPN8YOR261C SIS2P36024 562 aa7.91□□□□□ -1.14
RPN8YOR261C HAL5P38970 855 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms