RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W FRK1Q03002 865 aaPredicted RBP10.37□□□□□ -0.75
YPT11YNL304W INP54Q08227 384 aaKnown RBP10.37□□□□□ -0.75
YPT11YNL304W SUI2P20459 304 aaKnown RBP10.36□□□□□ -0.75
YPT11YNL304W PRP40P33203 583 aaKnown RBP10.36□□□□□ -0.75
YPT11YNL304W ADE16P54113 591 aaKnown RBP10.36□□□□□ -0.75
YPT11YNL304W YMR074CQ04773 145 aa10.36□□□□□ -0.75
YPT11YNL304W NSE3Q05541 303 aa10.36□□□□□ -0.75
YPT11YNL304W RVB2Q12464 471 aaKnown RBP10.36□□□□□ -0.75
YPT11YNL304W UBP1P25037 809 aa10.35□□□□□ -0.75
YPT11YNL304W UGA3P26370 528 aa10.35□□□□□ -0.75
YPT11YNL304W EDE1P34216 1381 aa10.35□□□□□ -0.75
YPT11YNL304W COBP00163 385 aa10.34□□□□□ -0.75
YPT11YNL304W GLN1P32288 370 aaKnown RBP10.34□□□□□ -0.75
YPT11YNL304W GYP7P48365 746 aa10.34□□□□□ -0.75
YPT11YNL304W FOX2Q02207 900 aaKnown RBP10.34□□□□□ -0.75
YPT11YNL304W RTT109Q07794 436 aa10.34□□□□□ -0.75
YPT11YNL304W NUP145P49687 1317 aa10.33□□□□□ -0.76
YPT11YNL304W OSM1P21375 501 aaKnown RBP10.33□□□□□ -0.76
YPT11YNL304W YFR016CP43597 1233 aaKnown RBP10.33□□□□□ -0.76
YPT11YNL304W YBP2P53169 641 aa10.33□□□□□ -0.76
YPT11YNL304W RRT14P40470 206 aa10.32□□□□□ -0.76
YPT11YNL304W MAK21Q12176 1025 aaKnown RBP10.32□□□□□ -0.76
YPT11YNL304W RPN11P43588 306 aaKnown RBP10.31□□□□□ -0.76
YPT11YNL304W HEF3P53978 1044 aaKnown RBP10.31□□□□□ -0.76
YPT11YNL304W YBR287WP38355 427 aa10.29□□□□□ -0.76
YPT11YNL304W BMS1Q08965 1183 aaKnown RBP10.29□□□□□ -0.76
YPT11YNL304W RAD2P07276 1031 aa10.28□□□□□ -0.76
YPT11YNL304W GRX1P25373 110 aaKnown RBP10.28□□□□□ -0.76
YPT11YNL304W RMT2Q03305 412 aa10.28□□□□□ -0.76
YPT11YNL304W TFA1P36100 482 aa10.27□□□□□ -0.77
YPT11YNL304W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
YPT11YNL304W ALE1Q08548 619 aa10.27□□□□□ -0.77
YPT11YNL304W LYS2P07702 1392 aa10.26□□□□□ -0.77
YPT11YNL304W YKR075CP36155 307 aa10.26□□□□□ -0.77
YPT11YNL304W BUD27P43573 796 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
YPT11YNL304W RIM15P43565 1770 aa10.26□□□□□ -0.77
YPT11YNL304W COQ4O13525 335 aa10.25□□□□□ -0.77
YPT11YNL304W BUD31P25337 157 aaPredicted RBP10.25□□□□□ -0.77
YPT11YNL304W FPR3P38911 411 aaKnown RBP10.25□□□□□ -0.77
YPT11YNL304W FUN12P39730 1002 aaKnown RBP10.23□□□□□ -0.77
YPT11YNL304W MDG1P53885 366 aa10.23□□□□□ -0.77
YPT11YNL304W SRT1Q03175 343 aa10.23□□□□□ -0.77
YPT11YNL304W MSB4Q12317 492 aa10.23□□□□□ -0.77
YPT11YNL304W PRI1P10363 409 aa10.22□□□□□ -0.77
YPT11YNL304W RAD4P14736 754 aa10.22□□□□□ -0.77
YPT11YNL304W DAL5P15365 543 aa10.22□□□□□ -0.77
YPT11YNL304W NOP8Q08287 484 aaPredicted RBP10.22□□□□□ -0.77
YPT11YNL304W NOP53Q12080 455 aaKnown RBP10.22□□□□□ -0.77
YPT11YNL304W YOL057WQ08225 711 aa10.21□□□□□ -0.77
YPT11YNL304W SSP2Q08646 371 aa10.21□□□□□ -0.77
YPT11YNL304W NPR2P39923 615 aa10.19□□□□□ -0.78
YPT11YNL304W YIL092WP40497 633 aa10.19□□□□□ -0.78
YPT11YNL304W YPP1P46951 817 aa10.17□□□□□ -0.78
YPT11YNL304W DNM1P54861 757 aa10.17□□□□□ -0.78
YPT11YNL304W BUG1Q12191 341 aa10.17□□□□□ -0.78
YPT11YNL304W MRP7P12687 371 aa10.16□□□□□ -0.78
YPT11YNL304W ALD2P47771 506 aa10.16□□□□□ -0.78
YPT11YNL304W TUM1Q08686 304 aaKnown RBP10.16□□□□□ -0.78
YPT11YNL304W GRE2Q12068 342 aaKnown RBP10.16□□□□□ -0.78
YPT11YNL304W PHM7Q12252 991 aa10.16□□□□□ -0.78
YPT11YNL304W VPS64Q03944 604 aa10.15□□□□□ -0.78
YPT11YNL304W BDF1P35817 686 aa10.14□□□□□ -0.79
YPT11YNL304W CST6P40535 587 aa10.14□□□□□ -0.79
YPT11YNL304W TEA1P47988 759 aa10.14□□□□□ -0.79
YPT11YNL304W SER1P33330 395 aaKnown RBP10.13□□□□□ -0.79
YPT11YNL304W UGA2P38067 497 aa10.13□□□□□ -0.79
YPT11YNL304W GTT3P39996 337 aa10.13□□□□□ -0.79
YPT11YNL304W LYS4P49367 693 aaPredicted RBP10.13□□□□□ -0.79
YPT11YNL304W ZDS2P54786 942 aa10.13□□□□□ -0.79
YPT11YNL304W NUP133P36161 1157 aa10.12□□□□□ -0.79
YPT11YNL304W ALD3P54114 506 aa10.12□□□□□ -0.79
YPT11YNL304W PKH1Q03407 766 aa10.12□□□□□ -0.79
YPT11YNL304W CSI1Q04368 295 aa10.11□□□□□ -0.79
YPT11YNL304W TRP5P00931 707 aaKnown RBP10.1□□□□□ -0.79
YPT11YNL304W YBL086CP38177 466 aa10.1□□□□□ -0.79
YPT11YNL304W YGL082WP53155 381 aa10.1□□□□□ -0.79
YPT11YNL304W UTP22P53254 1237 aaPredicted RBP10.1□□□□□ -0.79
YPT11YNL304W PUF6Q04373 656 aaKnown RBP10.1□□□□□ -0.79
YPT11YNL304W YDR306CQ06640 478 aa10.1□□□□□ -0.79
YPT11YNL304W SSA2P10592 639 aaKnown RBP10.09□□□□□ -0.79
YPT11YNL304W YNG2P38806 282 aaKnown RBP10.09□□□□□ -0.79
YPT11YNL304W POL32P47110 350 aa10.09□□□□□ -0.79
YPT11YNL304W RPS19AP07280 144 aaKnown RBP10.08□□□□□ -0.8
YPT11YNL304W RPS19BP07281 144 aaPredicted RBP10.08□□□□□ -0.8
YPT11YNL304W RAD24P32641 659 aa10.08□□□□□ -0.8
YPT11YNL304W APL2P36000 726 aaPredicted RBP10.08□□□□□ -0.8
YPT11YNL304W RPG1P38249 964 aaKnown RBP10.08□□□□□ -0.8
YPT11YNL304W NYV1Q12255 253 aa10.08□□□□□ -0.8
YPT11YNL304W NOP2P40991 618 aaKnown RBP10.07□□□□□ -0.8
YPT11YNL304W HPC2Q01448 625 aa10.07□□□□□ -0.8
YPT11YNL304W YLR271WQ06152 274 aa10.07□□□□□ -0.8
YPT11YNL304W SWI1P09547 1314 aa10.07□□□□□ -0.8
YPT11YNL304W SUP35P05453 685 aaKnown RBP10.06□□□□□ -0.8
YPT11YNL304W YGR122WP53272 402 aa10.06□□□□□ -0.8
YPT11YNL304W LPD1P09624 499 aaKnown RBP10.05□□□□□ -0.8
YPT11YNL304W BOI2P39969 1040 aa10.05□□□□□ -0.8
YPT11YNL304W YJR008WP47085 338 aa10.05□□□□□ -0.8
YPT11YNL304W YPR204WQ08995 1032 aa10.05□□□□□ -0.8
YPT11YNL304W UTP10P42945 1769 aaKnown RBP10.04□□□□□ -0.8
YPT11YNL304W ARG8P18544 423 aa10.04□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms