RNA–Protein interactions for RNA: YNL097C

PHO23, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene PHO23, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO23	YNL097C	YNL050C	P53952	270 aa		11.53	□□□□□ -0.56
PHO23	YNL097C	PRI1	P10363	409 aa		11.52	□□□□□ -0.57
PHO23	YNL097C	HEF3	P53978	1044 aa	Known RBP	11.52	□□□□□ -0.57
PHO23	YNL097C	ROM2	P51862	1356 aa	Known RBP	11.52	□□□□□ -0.57
PHO23	YNL097C	RPL17A	P05740	184 aa	Known RBP	11.51	□□□□□ -0.57
PHO23	YNL097C	RPL17B	P46990	184 aa	Known RBP	11.51	□□□□□ -0.57
PHO23	YNL097C	ZDS1	P50111	915 aa	Known RBP	11.51	□□□□□ -0.57
PHO23	YNL097C	ADE16	P54113	591 aa	Known RBP	11.51	□□□□□ -0.57
PHO23	YNL097C	FRK1	Q03002	865 aa	Predicted RBP	11.51	□□□□□ -0.57
PHO23	YNL097C	INP54	Q08227	384 aa	Known RBP	11.51	□□□□□ -0.57
PHO23	YNL097C	YBR287W	P38355	427 aa		11.5	□□□□□ -0.57
PHO23	YNL097C	RRT14	P40470	206 aa		11.5	□□□□□ -0.57
PHO23	YNL097C	ATG13	Q06628	738 aa		11.5	□□□□□ -0.57
PHO23	YNL097C	DOT5	P40553	215 aa		11.49	□□□□□ -0.57
PHO23	YNL097C	NUP145	P49687	1317 aa		11.49	□□□□□ -0.57
PHO23	YNL097C	KCC4	P25389	1037 aa		11.48	□□□□□ -0.57
PHO23	YNL097C	GYP7	P48365	746 aa		11.48	□□□□□ -0.57
PHO23	YNL097C	YRB30	P53107	440 aa	Predicted RBP	11.48	□□□□□ -0.57
PHO23	YNL097C	RIM15	P43565	1770 aa		11.48	□□□□□ -0.57
PHO23	YNL097C	COB	P00163	385 aa		11.47	□□□□□ -0.57
PHO23	YNL097C	MAM1	P40065	302 aa		11.47	□□□□□ -0.57
PHO23	YNL097C	FOX2	Q02207	900 aa	Known RBP	11.47	□□□□□ -0.57
PHO23	YNL097C	OSM1	P21375	501 aa	Known RBP	11.46	□□□□□ -0.57
PHO23	YNL097C	NSE3	Q05541	303 aa		11.45	□□□□□ -0.58
PHO23	YNL097C	UGA3	P26370	528 aa		11.44	□□□□□ -0.58
PHO23	YNL097C	FAP1	P53971	965 aa		11.44	□□□□□ -0.58
PHO23	YNL097C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
PHO23	YNL097C	BMS1	Q08965	1183 aa	Known RBP	11.44	□□□□□ -0.58
PHO23	YNL097C	DAL5	P15365	543 aa		11.43	□□□□□ -0.58
PHO23	YNL097C	YBP2	P53169	641 aa		11.43	□□□□□ -0.58
PHO23	YNL097C	LAM6	Q08001	693 aa		11.43	□□□□□ -0.58
PHO23	YNL097C	ALE1	Q08548	619 aa		11.43	□□□□□ -0.58
PHO23	YNL097C	COQ4	O13525	335 aa		11.42	□□□□□ -0.58
PHO23	YNL097C	RAD2	P07276	1031 aa		11.42	□□□□□ -0.58
PHO23	YNL097C	MAK21	Q12176	1025 aa	Known RBP	11.42	□□□□□ -0.58
PHO23	YNL097C	RPN11	P43588	306 aa	Known RBP	11.41	□□□□□ -0.58
PHO23	YNL097C	YJL181W	P46987	611 aa		11.41	□□□□□ -0.58
PHO23	YNL097C	YMR074C	Q04773	145 aa		11.41	□□□□□ -0.58
PHO23	YNL097C	GLN1	P32288	370 aa	Known RBP	11.4	□□□□□ -0.58
PHO23	YNL097C	EDE1	P34216	1381 aa		11.4	□□□□□ -0.59
PHO23	YNL097C	PRP40	P33203	583 aa	Known RBP	11.39	□□□□□ -0.59
PHO23	YNL097C	SRT1	Q03175	343 aa		11.39	□□□□□ -0.59
PHO23	YNL097C	YKR075C	P36155	307 aa		11.38	□□□□□ -0.59
PHO23	YNL097C	YIL092W	P40497	633 aa		11.38	□□□□□ -0.59
PHO23	YNL097C	FPR3	P38911	411 aa	Known RBP	11.37	□□□□□ -0.59
PHO23	YNL097C	RMT2	Q03305	412 aa		11.37	□□□□□ -0.59
PHO23	YNL097C	RAD4	P14736	754 aa		11.36	□□□□□ -0.59
PHO23	YNL097C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.36	□□□□□ -0.59	not detected
PHO23	YNL097C	LYS2	P07702	1392 aa		11.35	□□□□□ -0.59
PHO23	YNL097C	UBP1	P25037	809 aa		11.34	□□□□□ -0.59
PHO23	YNL097C	GRX1	P25373	110 aa	Known RBP	11.33	□□□□□ -0.6
PHO23	YNL097C	YOL057W	Q08225	711 aa		11.33	□□□□□ -0.6
PHO23	YNL097C	NOP8	Q08287	484 aa	Predicted RBP	11.33	□□□□□ -0.6
PHO23	YNL097C	YFR016C	P43597	1233 aa	Known RBP	11.32	□□□□□ -0.6
PHO23	YNL097C	ZDS2	P54786	942 aa		11.32	□□□□□ -0.6
PHO23	YNL097C	TUM1	Q08686	304 aa	Known RBP	11.32	□□□□□ -0.6
PHO23	YNL097C	NOP53	Q12080	455 aa	Known RBP	11.32	□□□□□ -0.6
PHO23	YNL097C	BUD31	P25337	157 aa	Predicted RBP	11.31	□□□□□ -0.6
PHO23	YNL097C	YPP1	P46951	817 aa		11.31	□□□□□ -0.6
PHO23	YNL097C	NPR2	P39923	615 aa		11.3	□□□□□ -0.6
PHO23	YNL097C	VPS64	Q03944	604 aa		11.3	□□□□□ -0.6
PHO23	YNL097C	TRP5	P00931	707 aa	Known RBP	11.29	□□□□□ -0.6
PHO23	YNL097C	MRP7	P12687	371 aa		11.29	□□□□□ -0.6
PHO23	YNL097C	CSI1	Q04368	295 aa		11.29	□□□□□ -0.6
PHO23	YNL097C	MSB4	Q12317	492 aa		11.29	□□□□□ -0.6
PHO23	YNL097C	POL32	P47110	350 aa		11.28	□□□□□ -0.6
PHO23	YNL097C	PUF6	Q04373	656 aa	Known RBP	11.28	□□□□□ -0.6
PHO23	YNL097C	SSP2	Q08646	371 aa		11.28	□□□□□ -0.6
PHO23	YNL097C	YGR122W	P53272	402 aa		11.27	□□□□□ -0.61
PHO23	YNL097C	RAD24	P32641	659 aa		11.26	□□□□□ -0.61
PHO23	YNL097C	APL2	P36000	726 aa	Predicted RBP	11.25	□□□□□ -0.61
PHO23	YNL097C	NUP133	P36161	1157 aa		11.25	□□□□□ -0.61
PHO23	YNL097C	DNM1	P54861	757 aa		11.25	□□□□□ -0.61
PHO23	YNL097C	AAD16	Q02895	342 aa		11.25	□□□□□ -0.61
PHO23	YNL097C	GRE2	Q12068	342 aa	Known RBP	11.25	□□□□□ -0.61
PHO23	YNL097C	TEA1	P47988	759 aa		11.24	□□□□□ -0.61
PHO23	YNL097C	LYS4	P49367	693 aa	Predicted RBP	11.24	□□□□□ -0.61
PHO23	YNL097C	MDG1	P53885	366 aa		11.24	□□□□□ -0.61
PHO23	YNL097C	YDR306C	Q06640	478 aa		11.24	□□□□□ -0.61
PHO23	YNL097C	SER1	P33330	395 aa	Known RBP	11.23	□□□□□ -0.61
PHO23	YNL097C	YNG2	P38806	282 aa	Known RBP	11.23	□□□□□ -0.61
PHO23	YNL097C	CST6	P40535	587 aa		11.23	□□□□□ -0.61
PHO23	YNL097C	SWI1	P09547	1314 aa		11.22	□□□□□ -0.61
PHO23	YNL097C	UTP10	P42945	1769 aa	Known RBP	11.22	□□□□□ -0.61
PHO23	YNL097C	YGL082W	P53155	381 aa		11.22	□□□□□ -0.61
PHO23	YNL097C	PHM7	Q12252	991 aa		11.22	□□□□□ -0.61
PHO23	YNL097C	SWC3	P31376	625 aa		11.21	□□□□□ -0.61
PHO23	YNL097C	PKH1	Q03407	766 aa		11.21	□□□□□ -0.61
PHO23	YNL097C	RPS19A	P07280	144 aa	Known RBP	11.2	□□□□□ -0.62
PHO23	YNL097C	RPS19B	P07281	144 aa	Predicted RBP	11.2	□□□□□ -0.62
PHO23	YNL097C	SPO1	P53541	631 aa		11.2	□□□□□ -0.62
PHO23	YNL097C	BUG1	Q12191	341 aa		11.2	□□□□□ -0.62
PHO23	YNL097C	YPR204W	Q08995	1032 aa		11.19	□□□□□ -0.62
PHO23	YNL097C	ARG8	P18544	423 aa		11.18	□□□□□ -0.62
PHO23	YNL097C	NYV1	Q12255	253 aa		11.18	□□□□□ -0.62
PHO23	YNL097C	ILV3	P39522	585 aa	Known RBP	11.17	□□□□□ -0.62
PHO23	YNL097C	BOI2	P39969	1040 aa		11.17	□□□□□ -0.62
PHO23	YNL097C	DCD1	P06773	312 aa		11.15	□□□□□ -0.62
PHO23	YNL097C	LPD1	P09624	499 aa	Known RBP	11.15	□□□□□ -0.62
PHO23	YNL097C	BDF1	P35817	686 aa		11.15	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms