RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	TUB4	P53378	473 aa		4.73	□□□□□ -1.65
VIP1	YLR410W	SVF1	Q05515	481 aa		4.73	□□□□□ -1.65
VIP1	YLR410W	MPC54	Q08550	464 aa		4.72	□□□□□ -1.65
VIP1	YLR410W	SRP40	P32583	406 aa	Predicted RBP	4.72	□□□□□ -1.65
VIP1	YLR410W	STB3	Q12427	513 aa		4.72	□□□□□ -1.65
VIP1	YLR410W	PDR1	P12383	1068 aa		4.72	□□□□□ -1.65
VIP1	YLR410W	GCD11	P32481	527 aa	Known RBP	4.72	□□□□□ -1.65
VIP1	YLR410W	MAG2	Q06436	670 aa	Known RBP	4.72	□□□□□ -1.65
VIP1	YLR410W	NPL4	P33755	580 aa		4.71	□□□□□ -1.65
VIP1	YLR410W	TGL3	P40308	642 aa		4.71	□□□□□ -1.65
VIP1	YLR410W	NAF1	P53919	492 aa	Known RBP	4.71	□□□□□ -1.65
VIP1	YLR410W	PML39	Q03760	334 aa		4.71	□□□□□ -1.65
VIP1	YLR410W	TEC1	P18412	486 aa		4.71	□□□□□ -1.66
VIP1	YLR410W	YKL091C	P33324	310 aa	Known RBP	4.71	□□□□□ -1.66
VIP1	YLR410W	MAD1	P40957	749 aa		4.71	□□□□□ -1.66
VIP1	YLR410W	ALD3	P54114	506 aa		4.71	□□□□□ -1.66
VIP1	YLR410W	PUF6	Q04373	656 aa	Known RBP	4.71	□□□□□ -1.66
VIP1	YLR410W	DPL1	Q05567	589 aa		4.71	□□□□□ -1.66
VIP1	YLR410W	MIP1	P15801	1254 aa		4.7	□□□□□ -1.66
VIP1	YLR410W	STE20	Q03497	939 aa	Known RBP	4.7	□□□□□ -1.66
VIP1	YLR410W	PHO87	P25360	923 aa		4.7	□□□□□ -1.66
VIP1	YLR410W	FIG4	P42837	879 aa		4.7	□□□□□ -1.66
VIP1	YLR410W	FOX2	Q02207	900 aa	Known RBP	4.69	□□□□□ -1.66
VIP1	YLR410W	YOL098C	Q12496	1037 aa		4.69	□□□□□ -1.66
VIP1	YLR410W	VAN1	P23642	535 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	PPX1	P38698	397 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
VIP1	YLR410W	ISM1	P48526	1002 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	ATG1	P53104	897 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
VIP1	YLR410W	MNL2	Q12205	849 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	TRP5	P00931	707 aa	Known RBP	4.68	□□□□□ -1.66
VIP1	YLR410W	GUT2	P32191	649 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	MET4	P32389	672 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	HAP4	P14064	554 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	RPT1	P33299	467 aa	Known RBP	4.68	□□□□□ -1.66
VIP1	YLR410W	RTF1	P53064	558 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	NMA111	P53920	997 aa		4.68	□□□□□ -1.66
VIP1	YLR410W	CWC24	P53769	259 aa		4.67	□□□□□ -1.66
VIP1	YLR410W	PTC4	P38089	393 aa		4.67	□□□□□ -1.66
VIP1	YLR410W	SRS2	P12954	1174 aa		4.66	□□□□□ -1.66
VIP1	YLR410W	TSR4	P25040	408 aa		4.66	□□□□□ -1.66
VIP1	YLR410W	YAF9	P53930	226 aa		4.66	□□□□□ -1.66
VIP1	YLR410W	FPR4	Q06205	392 aa	Predicted RBP	4.66	□□□□□ -1.66
VIP1	YLR410W	RTS3	P53289	263 aa		4.66	□□□□□ -1.66
VIP1	YLR410W	FAR11	P53917	953 aa		4.66	□□□□□ -1.66
VIP1	YLR410W	HAL5	P38970	855 aa	Known RBP	4.65	□□□□□ -1.66
VIP1	YLR410W	STR2	P47164	639 aa		4.65	□□□□□ -1.66
VIP1	YLR410W	ISR1	Q06098	443 aa	Known RBP	4.65	□□□□□ -1.66
VIP1	YLR410W	FRA1	Q07825	749 aa		4.65	□□□□□ -1.66
VIP1	YLR410W	ISU2	Q12056	156 aa		4.65	□□□□□ -1.66
VIP1	YLR410W	TSC13	Q99190	310 aa		4.65	□□□□□ -1.66
VIP1	YLR410W	BOI1	P38041	980 aa	Known RBP	4.65	□□□□□ -1.67
VIP1	YLR410W	RAM1	P22007	431 aa		4.65	□□□□□ -1.67
VIP1	YLR410W	RPB10	P22139	70 aa		4.65	□□□□□ -1.67
VIP1	YLR410W	ATG3	P40344	310 aa		4.65	□□□□□ -1.67
VIP1	YLR410W	GAS4	Q08271	471 aa		4.65	□□□□□ -1.67
VIP1	YLR410W	RPS26A	P39938	119 aa	Known RBP	4.64	□□□□□ -1.67
VIP1	YLR410W	RPS26B	P39939	119 aa	Known RBP	4.64	□□□□□ -1.67
VIP1	YLR410W	CDC53	Q12018	815 aa	Known RBP	4.64	□□□□□ -1.67
VIP1	YLR410W	PAC1	P39946	494 aa	Known RBP	4.64	□□□□□ -1.67
VIP1	YLR410W	ALR1	Q08269	859 aa		4.64	□□□□□ -1.67
VIP1	YLR410W	NMD2	P38798	1089 aa	Known RBP	4.63	□□□□□ -1.67
VIP1	YLR410W	IOC3	P43596	787 aa		4.63	□□□□□ -1.67
VIP1	YLR410W	WRS1	Q12109	432 aa	Known RBP	4.63	□□□□□ -1.67
VIP1	YLR410W	ISC10	P32645	267 aa		4.63	□□□□□ -1.67
VIP1	YLR410W	AIM9	P40053	627 aa	Known RBP	4.63	□□□□□ -1.67
VIP1	YLR410W	SUT1	P53032	299 aa	Known RBP	4.63	□□□□□ -1.67
VIP1	YLR410W	MTO1	P53070	669 aa		4.63	□□□□□ -1.67
VIP1	YLR410W	TRS33	Q99394	268 aa		4.63	□□□□□ -1.67
VIP1	YLR410W	CIT2	P08679	460 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	YJR107W	P47145	328 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	NTH2	P35172	780 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	AGE1	Q04412	482 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	YPR084W	Q06821	456 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	MSB4	Q12317	492 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	BUD31	P25337	157 aa	Predicted RBP	4.62	□□□□□ -1.67
VIP1	YLR410W	HDA3	Q06623	655 aa		4.62	□□□□□ -1.67
VIP1	YLR410W	IXR1	P33417	597 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	RRN7	P40992	514 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	GPI13	Q07830	1017 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	BDS1	Q08347	646 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	PRI2	P20457	528 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	SUV3	P32580	737 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	ULI1	P43604	169 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	ACF4	P47129	309 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	RPA14	P50106	137 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	YBL029C-A	Q3E756	94 aa		4.61	□□□□□ -1.67
VIP1	YLR410W	ELP4	Q02884	456 aa	Known RBP	4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-DR4	O74302	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	PDC1	P06169	563 aa	Known RBP	4.6	□□□□□ -1.67
VIP1	YLR410W	MST1	P07236	462 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-H	P0C2I4	478 aa	Known RBP	4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-A	P0CX57	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-PR1	P0CX58	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-OR	P0CX59	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-PR2	P0CX60	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-DR5	P0CX65	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-ER2	P0CX66	440 aa		4.6	□□□□□ -1.67
VIP1	YLR410W	TY1A-GR3	P0CX67	440 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms