RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeastyeast

Gene NUC1, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUC1YJL208C AOS1Q06624 347 aa11.6□□□□□ -0.55
NUC1YJL208C PRS1P32895 427 aaKnown RBP11.59□□□□□ -0.55
NUC1YJL208C SPT21P35209 758 aa11.59□□□□□ -0.55
NUC1YJL208C YMR074CQ04773 145 aa11.59□□□□□ -0.55
NUC1YJL208C MPP10P47083 593 aaKnown RBP11.58□□□□□ -0.56
NUC1YJL208C YNL050CP53952 270 aa11.58□□□□□ -0.56
NUC1YJL208C NTH2P35172 780 aa11.57□□□□□ -0.56
NUC1YJL208C DOT5P40553 215 aa11.57□□□□□ -0.56
NUC1YJL208C YFR016CP43597 1233 aaKnown RBP11.57□□□□□ -0.56
NUC1YJL208C INP54Q08227 384 aaKnown RBP11.57□□□□□ -0.56
NUC1YJL208C ADE16P54113 591 aaKnown RBP11.55□□□□□ -0.56
NUC1YJL208C FOX2Q02207 900 aaKnown RBP11.55□□□□□ -0.56
NUC1YJL208C THI22Q06490 572 aa11.55□□□□□ -0.56
NUC1YJL208C RIM15P43565 1770 aa11.54□□□□□ -0.56
NUC1YJL208C GLN1P32288 370 aaKnown RBP11.54□□□□□ -0.56
NUC1YJL208C MAM1P40065 302 aa11.54□□□□□ -0.56
NUC1YJL208C LAM6Q08001 693 aa11.54□□□□□ -0.56
NUC1YJL208C NUP145P49687 1317 aa11.54□□□□□ -0.56
NUC1YJL208C LYS2P07702 1392 aa11.54□□□□□ -0.56
NUC1YJL208C KCC4P25389 1037 aa11.53□□□□□ -0.56
NUC1YJL208C UGA3P26370 528 aa11.53□□□□□ -0.56
NUC1YJL208C ATG13Q06628 738 aa11.53□□□□□ -0.56
NUC1YJL208C FRK1Q03002 865 aaPredicted RBP11.52□□□□□ -0.57
NUC1YJL208C PRP40P33203 583 aaKnown RBP11.51□□□□□ -0.57
NUC1YJL208C ZDS1P50111 915 aaKnown RBP11.51□□□□□ -0.57
NUC1YJL208C HEF3P53978 1044 aaKnown RBP11.51□□□□□ -0.57
NUC1YJL208C OSM1P21375 501 aaKnown RBP11.5□□□□□ -0.57
NUC1YJL208C UBP1P25037 809 aa11.5□□□□□ -0.57
NUC1YJL208C SAP155P43612 1002 aa11.5□□□□□ -0.57
NUC1YJL208C NSE3Q05541 303 aa11.5□□□□□ -0.57
NUC1YJL208C COBP00163 385 aa11.49□□□□□ -0.57
NUC1YJL208C SUI2P20459 304 aaKnown RBP11.49□□□□□ -0.57
NUC1YJL208C YJL181WP46987 611 aa11.49□□□□□ -0.57
NUC1YJL208C RTT109Q07794 436 aa11.49□□□□□ -0.57
NUC1YJL208C TPD3P31383 635 aa11.48□□□□□ -0.57
NUC1YJL208C YKR075CP36155 307 aa11.48□□□□□ -0.57
NUC1YJL208C GYP7P48365 746 aa11.48□□□□□ -0.57
NUC1YJL208C RVB2Q12464 471 aaKnown RBP11.47□□□□□ -0.57
NUC1YJL208C RPN11P43588 306 aaKnown RBP11.46□□□□□ -0.57
NUC1YJL208C YBP2P53169 641 aa11.46□□□□□ -0.57
NUC1YJL208C BUD31P25337 157 aaPredicted RBP11.45□□□□□ -0.58
NUC1YJL208C GRX1P25373 110 aaKnown RBP11.45□□□□□ -0.58
NUC1YJL208C MAK21Q12176 1025 aaKnown RBP11.45□□□□□ -0.58
NUC1YJL208C NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.44□□□□□ -0.58not detected
NUC1YJL208C RMT2Q03305 412 aa11.43□□□□□ -0.58
NUC1YJL208C RRT14P40470 206 aa11.42□□□□□ -0.58
NUC1YJL208C MDG1P53885 366 aa11.42□□□□□ -0.58
NUC1YJL208C BMS1Q08965 1183 aaKnown RBP11.41□□□□□ -0.58
NUC1YJL208C YKR023WP36119 530 aaKnown RBP11.4□□□□□ -0.58
NUC1YJL208C MSB4Q12317 492 aa11.4□□□□□ -0.58
NUC1YJL208C RAD4P14736 754 aa11.39□□□□□ -0.59
NUC1YJL208C NPR2P39923 615 aa11.39□□□□□ -0.59
NUC1YJL208C BUD27P43573 796 aaKnown RBP RIP-Chip data11.39□□□□□ -0.59not detected
NUC1YJL208C TFA1P36100 482 aa11.38□□□□□ -0.59
NUC1YJL208C ALE1Q08548 619 aa11.38□□□□□ -0.59
NUC1YJL208C COQ4O13525 335 aa11.37□□□□□ -0.59
NUC1YJL208C CDC27P38042 758 aa11.37□□□□□ -0.59
NUC1YJL208C GTT3P39996 337 aa11.37□□□□□ -0.59
NUC1YJL208C SRT1Q03175 343 aa11.37□□□□□ -0.59
NUC1YJL208C RAD2P07276 1031 aa11.36□□□□□ -0.59
NUC1YJL208C YOL057WQ08225 711 aa11.36□□□□□ -0.59
NUC1YJL208C SSP2Q08646 371 aa11.36□□□□□ -0.59
NUC1YJL208C NOP53Q12080 455 aaKnown RBP11.36□□□□□ -0.59
NUC1YJL208C UTP10P42945 1769 aaKnown RBP11.35□□□□□ -0.59
NUC1YJL208C BDF1P35817 686 aa11.33□□□□□ -0.6
NUC1YJL208C PHM7Q12252 991 aa11.33□□□□□ -0.6
NUC1YJL208C YIL092WP40497 633 aa11.32□□□□□ -0.6
NUC1YJL208C DNM1P54861 757 aa11.32□□□□□ -0.6
NUC1YJL208C TUM1Q08686 304 aaKnown RBP11.31□□□□□ -0.6
NUC1YJL208C GRE2Q12068 342 aaKnown RBP11.31□□□□□ -0.6
NUC1YJL208C BUG1Q12191 341 aa11.31□□□□□ -0.6
NUC1YJL208C YBR287WP38355 427 aa11.3□□□□□ -0.6
NUC1YJL208C ALD2P47771 506 aa11.3□□□□□ -0.6
NUC1YJL208C YPP1P46951 817 aa11.29□□□□□ -0.6
NUC1YJL208C UTP22P53254 1237 aaPredicted RBP11.29□□□□□ -0.6
NUC1YJL208C YDR306CQ06640 478 aa11.28□□□□□ -0.6
NUC1YJL208C MRP7P12687 371 aa11.27□□□□□ -0.61
NUC1YJL208C CST6P40535 587 aa11.27□□□□□ -0.61
NUC1YJL208C LYS4P49367 693 aaPredicted RBP11.27□□□□□ -0.61
NUC1YJL208C DAL5P15365 543 aa11.26□□□□□ -0.61
NUC1YJL208C UGA2P38067 497 aa11.26□□□□□ -0.61
NUC1YJL208C YBL086CP38177 466 aa11.26□□□□□ -0.61
NUC1YJL208C FPR3P38911 411 aaKnown RBP11.26□□□□□ -0.61
NUC1YJL208C YJR008WP47085 338 aa11.26□□□□□ -0.61
NUC1YJL208C TEA1P47988 759 aa11.26□□□□□ -0.61
NUC1YJL208C RPS19AP07280 144 aaKnown RBP11.25□□□□□ -0.61
NUC1YJL208C RPS19BP07281 144 aaPredicted RBP11.25□□□□□ -0.61
NUC1YJL208C RIM101P33400 625 aa11.25□□□□□ -0.61
NUC1YJL208C NOP8Q08287 484 aaPredicted RBP11.25□□□□□ -0.61
NUC1YJL208C ALD3P54114 506 aa11.24□□□□□ -0.61
NUC1YJL208C YLR271WQ06152 274 aa11.24□□□□□ -0.61
NUC1YJL208C SSA2P10592 639 aaKnown RBP11.23□□□□□ -0.61
NUC1YJL208C CTH1P47976 325 aa11.23□□□□□ -0.61
NUC1YJL208C NYV1Q12255 253 aa11.23□□□□□ -0.61
NUC1YJL208C SWI1P09547 1314 aa11.22□□□□□ -0.61
NUC1YJL208C ZDS2P54786 942 aa11.22□□□□□ -0.61
NUC1YJL208C YPR204WQ08995 1032 aa11.22□□□□□ -0.61
NUC1YJL208C HOP09932 586 aa11.21□□□□□ -0.61
NUC1YJL208C ARG8P18544 423 aa11.21□□□□□ -0.61
NUC1YJL208C NUP133P36161 1157 aa11.21□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms