RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MTC5Q03897 1148 aa6.17□□□□□ -1.42
SNU56YDR240C TYW1Q08960 810 aaKnown RBP6.17□□□□□ -1.42
SNU56YDR240C TRM1P15565 570 aaKnown RBP6.16□□□□□ -1.42
SNU56YDR240C ESS1P22696 170 aa6.16□□□□□ -1.42
SNU56YDR240C SSA2P10592 639 aaKnown RBP6.15□□□□□ -1.42
SNU56YDR240C TRK2P28584 889 aa6.15□□□□□ -1.42
SNU56YDR240C SCW11P53189 542 aa6.15□□□□□ -1.42
SNU56YDR240C YGR035CP53222 116 aa6.15□□□□□ -1.42
SNU56YDR240C MIP1P15801 1254 aa6.15□□□□□ -1.43
SNU56YDR240C KTR1P27810 393 aaKnown RBP6.14□□□□□ -1.43
SNU56YDR240C YIR007WP40566 764 aa6.13□□□□□ -1.43
SNU56YDR240C PKH3Q03306 898 aaPredicted RBP6.13□□□□□ -1.43
SNU56YDR240C TY1A-BLQ12266 440 aa6.13□□□□□ -1.43
SNU56YDR240C RSC30P38781 883 aa6.12□□□□□ -1.43
SNU56YDR240C YJU3P28321 313 aa6.11□□□□□ -1.43
SNU56YDR240C HPF1Q05164 967 aa6.1□□□□□ -1.43
SNU56YDR240C ARG82P07250 355 aa6.09□□□□□ -1.43
SNU56YDR240C VAC17P25591 423 aa6.09□□□□□ -1.44
SNU56YDR240C LSC2P53312 427 aa6.09□□□□□ -1.44
SNU56YDR240C ARG8P18544 423 aa6.08□□□□□ -1.44
SNU56YDR240C AAD14P42884 376 aa6.08□□□□□ -1.44
SNU56YDR240C UBP2Q01476 1272 aa6.08□□□□□ -1.44
SNU56YDR240C RAD59Q12223 238 aa6.08□□□□□ -1.44
SNU56YDR240C YBL086CP38177 466 aa6.07□□□□□ -1.44
SNU56YDR240C HPC2Q01448 625 aa6.07□□□□□ -1.44
SNU56YDR240C GUA1P38625 525 aaKnown RBP6.05□□□□□ -1.44
SNU56YDR240C YJR098CP47139 656 aa6.03□□□□□ -1.44
SNU56YDR240C YPR204WQ08995 1032 aa6.03□□□□□ -1.44
SNU56YDR240C LEO1P38439 464 aa6.02□□□□□ -1.45
SNU56YDR240C DLD1P32891 587 aa6.01□□□□□ -1.45
SNU56YDR240C CSE4P36012 229 aa6.01□□□□□ -1.45
SNU56YDR240C EMW1P42842 904 aaKnown RBP6.01□□□□□ -1.45
SNU56YDR240C TCB1Q12466 1186 aa6.01□□□□□ -1.45
SNU56YDR240C MAK16P10962 306 aaPredicted RBP6□□□□□ -1.45
SNU56YDR240C BRL1P38770 471 aa6□□□□□ -1.45
SNU56YDR240C ROG3P43602 733 aa6□□□□□ -1.45
SNU56YDR240C DPH6Q12429 685 aa6□□□□□ -1.45
SNU56YDR240C NAF1P53919 492 aaKnown RBP5.99□□□□□ -1.45
SNU56YDR240C APP1P53933 587 aa5.99□□□□□ -1.45
SNU56YDR240C OSH7P38755 437 aa5.98□□□□□ -1.45
SNU56YDR240C ICP55P40051 511 aa5.98□□□□□ -1.45
SNU56YDR240C TY1A-MR1Q04215 440 aa5.98□□□□□ -1.45
SNU56YDR240C FIG4P42837 879 aa5.97□□□□□ -1.45
SNU56YDR240C TEC1P18412 486 aa5.96□□□□□ -1.45
SNU56YDR240C SPT5P27692 1063 aaKnown RBP5.96□□□□□ -1.45
SNU56YDR240C ITT1Q04638 464 aa5.96□□□□□ -1.46
SNU56YDR240C PUS1Q12211 544 aaKnown RBP5.96□□□□□ -1.46
SNU56YDR240C TFB3Q03290 321 aa5.95□□□□□ -1.46
SNU56YDR240C CCP1P00431 361 aa5.94□□□□□ -1.46
SNU56YDR240C YBL036CP38197 257 aa5.94□□□□□ -1.46
SNU56YDR240C HGH1P48362 394 aaKnown RBP5.94□□□□□ -1.46
SNU56YDR240C LYS5P50113 272 aa5.94□□□□□ -1.46
SNU56YDR240C GUT2P32191 649 aa5.93□□□□□ -1.46
SNU56YDR240C MKS1P34072 584 aa5.93□□□□□ -1.46
SNU56YDR240C YPR084WQ06821 456 aa5.93□□□□□ -1.46
SNU56YDR240C PHM7Q12252 991 aa5.92□□□□□ -1.46
SNU56YDR240C DFG5Q05031 458 aa5.91□□□□□ -1.46
SNU56YDR240C LSB3P43603 459 aaKnown RBP5.9□□□□□ -1.46
SNU56YDR240C MRX12P47084 519 aa5.9□□□□□ -1.46
SNU56YDR240C JJJ3P47138 172 aa5.9□□□□□ -1.46
SNU56YDR240C FRA1Q07825 749 aa5.9□□□□□ -1.46
SNU56YDR240C STE20Q03497 939 aaKnown RBP5.89□□□□□ -1.47
SNU56YDR240C BDS1Q08347 646 aa5.89□□□□□ -1.47
SNU56YDR240C PKC1P24583 1151 aa5.88□□□□□ -1.47
SNU56YDR240C CDC19P00549 500 aaKnown RBP5.87□□□□□ -1.47
SNU56YDR240C FBP26P32604 452 aa5.87□□□□□ -1.47
SNU56YDR240C YPP1P46951 817 aa5.87□□□□□ -1.47
SNU56YDR240C VTC4P47075 721 aa5.86□□□□□ -1.47
SNU56YDR240C NAM8Q00539 523 aaKnown RBP5.86□□□□□ -1.47
SNU56YDR240C MCM16Q12262 181 aa5.86□□□□□ -1.47
SNU56YDR240C STE6P12866 1290 aa5.85□□□□□ -1.47
SNU56YDR240C BIO2P32451 375 aa5.85□□□□□ -1.47
SNU56YDR240C MDJ1P35191 511 aa5.85□□□□□ -1.47
SNU56YDR240C NSG2P53898 299 aa5.83□□□□□ -1.48
SNU56YDR240C RPP2BP02400 110 aaKnown RBP5.83□□□□□ -1.48
SNU56YDR240C SUP45P12385 437 aaKnown RBP5.83□□□□□ -1.48
SNU56YDR240C ATG3P40344 310 aa5.83□□□□□ -1.48
SNU56YDR240C APL6P46682 809 aa5.83□□□□□ -1.48
SNU56YDR240C ATG20Q07528 640 aa5.83□□□□□ -1.48
SNU56YDR240C YDJ1P25491 409 aaKnown RBP5.82□□□□□ -1.48
SNU56YDR240C EMP47P43555 445 aa5.82□□□□□ -1.48
SNU56YDR240C ISU1Q03020 165 aa5.81□□□□□ -1.48
SNU56YDR240C AI1P03875 834 aa5.8□□□□□ -1.48
SNU56YDR240C CUZ1P53899 274 aa5.8□□□□□ -1.48
SNU56YDR240C UTP13Q05946 817 aaKnown RBP5.8□□□□□ -1.48
SNU56YDR240C DAL1P32375 460 aa5.79□□□□□ -1.48
SNU56YDR240C YJL007CP47080 104 aa5.79□□□□□ -1.48
SNU56YDR240C YNL108CP53929 270 aa5.79□□□□□ -1.48
SNU56YDR240C ISF1P32488 338 aa5.78□□□□□ -1.48
SNU56YDR240C YFL066CP43538 392 aa5.78□□□□□ -1.48
SNU56YDR240C THI72Q08579 599 aa5.78□□□□□ -1.48
SNU56YDR240C ENO2P00925 437 aaKnown RBP5.77□□□□□ -1.49
SNU56YDR240C CEM1P39525 442 aa5.77□□□□□ -1.49
SNU56YDR240C RIM21P48565 533 aa5.77□□□□□ -1.49
SNU56YDR240C SPT2P06843 333 aaPredicted RBP5.77□□□□□ -1.49
SNU56YDR240C DLD3P39976 496 aaKnown RBP5.76□□□□□ -1.49
SNU56YDR240C BIM1P40013 344 aa5.76□□□□□ -1.49
SNU56YDR240C ISR1Q06098 443 aaKnown RBP5.76□□□□□ -1.49
SNU56YDR240C RPL34BP40525 121 aaKnown RBP5.75□□□□□ -1.49
SNU56YDR240C CCT8P47079 568 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms