RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SAS4Q04003 481 aa6.96□□□□□ -1.3
TRM1YDR120C YPR084WQ06821 456 aa6.96□□□□□ -1.3
TRM1YDR120C PUP1P25043 261 aa6.95□□□□□ -1.3
TRM1YDR120C TPD3P31383 635 aa6.95□□□□□ -1.3
TRM1YDR120C FRA1Q07825 749 aa6.95□□□□□ -1.3
TRM1YDR120C GYP1Q08484 637 aa6.94□□□□□ -1.3
TRM1YDR120C GUT2P32191 649 aa6.93□□□□□ -1.3
TRM1YDR120C TGL4P36165 910 aa6.93□□□□□ -1.3
TRM1YDR120C STE20Q03497 939 aaKnown RBP6.93□□□□□ -1.3
TRM1YDR120C MOD5P07884 428 aa6.93□□□□□ -1.3
TRM1YDR120C RRD1P40454 393 aaKnown RBP6.93□□□□□ -1.3
TRM1YDR120C MRX12P47084 519 aa6.92□□□□□ -1.3
TRM1YDR120C VAC17P25591 423 aa6.91□□□□□ -1.3
TRM1YDR120C YML083CQ04526 418 aa6.91□□□□□ -1.3
TRM1YDR120C ENV9Q08651 330 aa6.9□□□□□ -1.3
TRM1YDR120C APL6P46682 809 aa6.89□□□□□ -1.31
TRM1YDR120C RPL34AP87262 121 aaPredicted RBP6.89□□□□□ -1.31
TRM1YDR120C SLX8P40072 274 aa6.88□□□□□ -1.31
TRM1YDR120C ATG3P40344 310 aa6.87□□□□□ -1.31
TRM1YDR120C KTR7P40504 517 aa6.87□□□□□ -1.31
TRM1YDR120C MRF1P30775 413 aaPredicted RBP6.87□□□□□ -1.31
TRM1YDR120C SDH2P21801 266 aa6.86□□□□□ -1.31
TRM1YDR120C VRP1P37370 817 aa6.86□□□□□ -1.31
TRM1YDR120C YML020WQ03722 664 aa6.86□□□□□ -1.31
TRM1YDR120C UTP13Q05946 817 aaKnown RBP6.86□□□□□ -1.31
TRM1YDR120C ECM23Q02710 187 aa6.85□□□□□ -1.31
TRM1YDR120C GAL2P13181 574 aa6.84□□□□□ -1.31
TRM1YDR120C SOH1P38633 127 aa6.84□□□□□ -1.31
TRM1YDR120C CDC3P32457 520 aaKnown RBP6.82□□□□□ -1.32
TRM1YDR120C IXR1P33417 597 aa6.82□□□□□ -1.32
TRM1YDR120C ITT1Q04638 464 aa6.82□□□□□ -1.32
TRM1YDR120C NOP8Q08287 484 aaPredicted RBP6.82□□□□□ -1.32
TRM1YDR120C BDP1P46678 594 aa6.81□□□□□ -1.32
TRM1YDR120C PHO87P25360 923 aa6.8□□□□□ -1.32
TRM1YDR120C KIP2P28743 706 aa6.8□□□□□ -1.32
TRM1YDR120C UBX7P38349 436 aa6.8□□□□□ -1.32
TRM1YDR120C PUS5Q06244 254 aa6.8□□□□□ -1.32
TRM1YDR120C BCK2P33306 851 aa6.79□□□□□ -1.32
TRM1YDR120C HAL5P38970 855 aaKnown RBP6.79□□□□□ -1.32
TRM1YDR120C CST6P40535 587 aa6.79□□□□□ -1.32
TRM1YDR120C ISR1Q06098 443 aaKnown RBP6.79□□□□□ -1.32
TRM1YDR120C HAP4P14064 554 aa6.78□□□□□ -1.32
TRM1YDR120C ACS2P52910 683 aaKnown RBP6.78□□□□□ -1.32
TRM1YDR120C SYH1Q02875 849 aaKnown RBP6.78□□□□□ -1.32
TRM1YDR120C FRK1Q03002 865 aaPredicted RBP6.78□□□□□ -1.32
TRM1YDR120C ATG20Q07528 640 aa6.78□□□□□ -1.32
TRM1YDR120C TSC13Q99190 310 aa6.77□□□□□ -1.33
TRM1YDR120C EMW1P42842 904 aaKnown RBP6.76□□□□□ -1.33
TRM1YDR120C YEL077CQ3E7X8 1277 aa6.76□□□□□ -1.33
TRM1YDR120C ROM1P53046 1155 aa6.76□□□□□ -1.33
TRM1YDR120C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
TRM1YDR120C APP1P53933 587 aa6.75□□□□□ -1.33
TRM1YDR120C MIP1P15801 1254 aa6.74□□□□□ -1.33
TRM1YDR120C PDI1P17967 522 aaKnown RBP6.74□□□□□ -1.33
TRM1YDR120C HDA3Q06623 655 aa6.74□□□□□ -1.33
TRM1YDR120C GAS4Q08271 471 aa6.74□□□□□ -1.33
TRM1YDR120C INO80P53115 1489 aa6.74□□□□□ -1.33
TRM1YDR120C SSF1P38789 453 aaPredicted RBP6.73□□□□□ -1.33
TRM1YDR120C XDJ1P39102 459 aa6.73□□□□□ -1.33
TRM1YDR120C CWC15Q03772 175 aaKnown RBP6.73□□□□□ -1.33
TRM1YDR120C PUF6Q04373 656 aaKnown RBP6.73□□□□□ -1.33
TRM1YDR120C HAT1Q12341 374 aa6.73□□□□□ -1.33
TRM1YDR120C TPS3P38426 1054 aaKnown RBP6.72□□□□□ -1.33
TRM1YDR120C AIM9P40053 627 aaKnown RBP6.72□□□□□ -1.33
TRM1YDR120C YFL034WP43564 1073 aa6.72□□□□□ -1.33
TRM1YDR120C MON2P48563 1636 aaPredicted RBP6.71□□□□□ -1.34
TRM1YDR120C FBP26P32604 452 aa6.7□□□□□ -1.34
TRM1YDR120C MRT4P33201 236 aaKnown RBP6.7□□□□□ -1.34
TRM1YDR120C ISU1Q03020 165 aa6.7□□□□□ -1.34
TRM1YDR120C AMS1P22855 1083 aa6.69□□□□□ -1.34
TRM1YDR120C MKS1P34072 584 aa6.69□□□□□ -1.34
TRM1YDR120C SLD2P34252 453 aa6.69□□□□□ -1.34
TRM1YDR120C SPT2P06843 333 aaPredicted RBP6.68□□□□□ -1.34
TRM1YDR120C NTH2P35172 780 aa6.68□□□□□ -1.34
TRM1YDR120C HED1Q03937 162 aa6.68□□□□□ -1.34
TRM1YDR120C VAN1P23642 535 aa6.67□□□□□ -1.34
TRM1YDR120C YBL086CP38177 466 aa6.67□□□□□ -1.34
TRM1YDR120C UTR2P32623 467 aa6.67□□□□□ -1.34
TRM1YDR120C STE6P12866 1290 aa6.66□□□□□ -1.34
TRM1YDR120C SRS2P12954 1174 aa6.66□□□□□ -1.34
TRM1YDR120C UBP1P25037 809 aa6.66□□□□□ -1.34
TRM1YDR120C PNP1Q05788 311 aa6.66□□□□□ -1.34
TRM1YDR120C PUN1Q06991 263 aa6.66□□□□□ -1.34
TRM1YDR120C TRS33Q99394 268 aa6.66□□□□□ -1.34
TRM1YDR120C SWI5P08153 709 aa6.65□□□□□ -1.34
TRM1YDR120C RPS6AP0CX37 236 aaKnown RBP6.65□□□□□ -1.34
TRM1YDR120C RPS6BP0CX38 236 aaPredicted RBP6.65□□□□□ -1.34
TRM1YDR120C SEN54Q02825 467 aaPredicted RBP6.65□□□□□ -1.34
TRM1YDR120C KAR5Q04746 504 aa6.65□□□□□ -1.34
TRM1YDR120C YBL113CQ7M4S9 792 aa6.65□□□□□ -1.34
TRM1YDR120C CYT1P07143 309 aa6.64□□□□□ -1.35
TRM1YDR120C ERP5P38819 212 aa6.64□□□□□ -1.35
TRM1YDR120C CLA4P48562 842 aa6.64□□□□□ -1.35
TRM1YDR120C DFG5Q05031 458 aa6.64□□□□□ -1.35
TRM1YDR120C DAT1P13483 248 aaKnown RBP6.63□□□□□ -1.35
TRM1YDR120C SUV3P32580 737 aa6.63□□□□□ -1.35
TRM1YDR120C TBS1P38114 1094 aa6.62□□□□□ -1.35
TRM1YDR120C BOL3P39724 118 aa6.62□□□□□ -1.35
TRM1YDR120C RAS1P01119 309 aa6.62□□□□□ -1.35
TRM1YDR120C TRL1P09880 827 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms