RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C ARG8P18544 423 aa3.89□□□□□ -1.79
VPS54YDR027C ARG82P07250 355 aa3.88□□□□□ -1.79
VPS54YDR027C GLY1P37303 387 aaKnown RBP3.88□□□□□ -1.79
VPS54YDR027C RSC30P38781 883 aa3.88□□□□□ -1.79
VPS54YDR027C ACO2P39533 789 aa3.88□□□□□ -1.79
VPS54YDR027C CSN12P47130 423 aa3.88□□□□□ -1.79
VPS54YDR027C MIP1P15801 1254 aa3.88□□□□□ -1.79
VPS54YDR027C KTR1P27810 393 aaKnown RBP3.88□□□□□ -1.79
VPS54YDR027C SCW11P53189 542 aa3.87□□□□□ -1.79
VPS54YDR027C YBL086CP38177 466 aa3.86□□□□□ -1.79
VPS54YDR027C LSC2P53312 427 aa3.86□□□□□ -1.79
VPS54YDR027C APP1P53933 587 aa3.86□□□□□ -1.79
VPS54YDR027C AAD14P42884 376 aa3.86□□□□□ -1.79
VPS54YDR027C EMW1P42842 904 aaKnown RBP3.85□□□□□ -1.79
VPS54YDR027C UBP2Q01476 1272 aa3.84□□□□□ -1.79
VPS54YDR027C ITT1Q04638 464 aa3.84□□□□□ -1.79
VPS54YDR027C RAD59Q12223 238 aa3.84□□□□□ -1.79
VPS54YDR027C FIG4P42837 879 aa3.84□□□□□ -1.8
VPS54YDR027C YGR035CP53222 116 aa3.84□□□□□ -1.8
VPS54YDR027C YIR007WP40566 764 aa3.83□□□□□ -1.8
VPS54YDR027C TY1A-BLQ12266 440 aa3.83□□□□□ -1.8
VPS54YDR027C MKS1P34072 584 aa3.83□□□□□ -1.8
VPS54YDR027C SSA2P10592 639 aaKnown RBP3.82□□□□□ -1.8
VPS54YDR027C TEC1P18412 486 aa3.82□□□□□ -1.8
VPS54YDR027C DLD1P32891 587 aa3.82□□□□□ -1.8
VPS54YDR027C YJR098CP47139 656 aa3.82□□□□□ -1.8
VPS54YDR027C TCB1Q12466 1186 aa3.81□□□□□ -1.8
VPS54YDR027C TRK2P28584 889 aa3.81□□□□□ -1.8
VPS54YDR027C DFG5Q05031 458 aa3.81□□□□□ -1.8
VPS54YDR027C KIN1P13185 1064 aa3.79□□□□□ -1.8
VPS54YDR027C BDS1Q08347 646 aa3.79□□□□□ -1.8
VPS54YDR027C HPF1Q05164 967 aa3.79□□□□□ -1.8
VPS54YDR027C GUT2P32191 649 aa3.78□□□□□ -1.8
VPS54YDR027C MAK16P10962 306 aaPredicted RBP3.77□□□□□ -1.81
VPS54YDR027C FBP26P32604 452 aa3.77□□□□□ -1.81
VPS54YDR027C OSH7P38755 437 aa3.77□□□□□ -1.81
VPS54YDR027C ROG3P43602 733 aa3.77□□□□□ -1.81
VPS54YDR027C YPR084WQ06821 456 aa3.77□□□□□ -1.81
VPS54YDR027C TY1A-MR1Q04215 440 aa3.76□□□□□ -1.81
VPS54YDR027C STE6P12866 1290 aa3.76□□□□□ -1.81
VPS54YDR027C NAF1P53919 492 aaKnown RBP3.76□□□□□ -1.81
VPS54YDR027C YPR204WQ08995 1032 aa3.76□□□□□ -1.81
VPS54YDR027C RPP2BP02400 110 aaKnown RBP3.75□□□□□ -1.81
VPS54YDR027C LEU3P08638 886 aa3.75□□□□□ -1.81
VPS54YDR027C STE20Q03497 939 aaKnown RBP3.75□□□□□ -1.81
VPS54YDR027C MTC5Q03897 1148 aa3.75□□□□□ -1.81
VPS54YDR027C ATG20Q07528 640 aa3.75□□□□□ -1.81
VPS54YDR027C DPH6Q12429 685 aa3.75□□□□□ -1.81
VPS54YDR027C ISU1Q03020 165 aa3.74□□□□□ -1.81
VPS54YDR027C DLD3P39976 496 aaKnown RBP3.74□□□□□ -1.81
VPS54YDR027C RPN1P38764 993 aaKnown RBP3.73□□□□□ -1.81
VPS54YDR027C LYS5P50113 272 aa3.73□□□□□ -1.81
VPS54YDR027C FRA1Q07825 749 aa3.73□□□□□ -1.81
VPS54YDR027C CSE4P36012 229 aa3.73□□□□□ -1.81
VPS54YDR027C CDC19P00549 500 aaKnown RBP3.72□□□□□ -1.81
VPS54YDR027C GUA1P38625 525 aaKnown RBP3.72□□□□□ -1.81
VPS54YDR027C VTC4P47075 721 aa3.72□□□□□ -1.81
VPS54YDR027C CCP1P00431 361 aa3.71□□□□□ -1.82
VPS54YDR027C YBL036CP38197 257 aa3.71□□□□□ -1.82
VPS54YDR027C MRX12P47084 519 aa3.71□□□□□ -1.82
VPS54YDR027C SPT5P27692 1063 aaKnown RBP3.7□□□□□ -1.82
VPS54YDR027C BRL1P38770 471 aa3.7□□□□□ -1.82
VPS54YDR027C NAM8Q00539 523 aaKnown RBP3.7□□□□□ -1.82
VPS54YDR027C ICP55P40051 511 aa3.69□□□□□ -1.82
VPS54YDR027C PUS1Q12211 544 aaKnown RBP3.69□□□□□ -1.82
VPS54YDR027C DAT1P13483 248 aaKnown RBP3.69□□□□□ -1.82
VPS54YDR027C DAL1P32375 460 aa3.69□□□□□ -1.82
VPS54YDR027C EMP47P43555 445 aa3.69□□□□□ -1.82
VPS54YDR027C HPC2Q01448 625 aa3.69□□□□□ -1.82
VPS54YDR027C MCM16Q12262 181 aa3.69□□□□□ -1.82
VPS54YDR027C ISF1P32488 338 aa3.68□□□□□ -1.82
VPS54YDR027C JJJ3P47138 172 aa3.68□□□□□ -1.82
VPS54YDR027C ISR1Q06098 443 aaKnown RBP3.68□□□□□ -1.82
VPS54YDR027C WTM2Q12206 467 aa3.68□□□□□ -1.82
VPS54YDR027C UTR2P32623 467 aa3.68□□□□□ -1.82
VPS54YDR027C TBS1P38114 1094 aa3.67□□□□□ -1.82
VPS54YDR027C PHM7Q12252 991 aa3.67□□□□□ -1.82
VPS54YDR027C CEM1P39525 442 aa3.67□□□□□ -1.82
VPS54YDR027C CUZ1P53899 274 aa3.67□□□□□ -1.82
VPS54YDR027C SPT2P06843 333 aaPredicted RBP3.67□□□□□ -1.82
VPS54YDR027C ATG3P40344 310 aa3.66□□□□□ -1.82
VPS54YDR027C UBP15P50101 1230 aa3.66□□□□□ -1.82
VPS54YDR027C MSN5P52918 1224 aa3.66□□□□□ -1.82
VPS54YDR027C AHP1P38013 176 aaKnown RBP3.66□□□□□ -1.82
VPS54YDR027C TFB3Q03290 321 aa3.66□□□□□ -1.82
VPS54YDR027C YDJ1P25491 409 aaKnown RBP3.65□□□□□ -1.82
VPS54YDR027C YPP1P46951 817 aa3.65□□□□□ -1.82
VPS54YDR027C YMR265CQ03508 461 aaKnown RBP3.65□□□□□ -1.82
VPS54YDR027C APL6P46682 809 aa3.65□□□□□ -1.83
VPS54YDR027C NSG2P53898 299 aa3.65□□□□□ -1.83
VPS54YDR027C AI1P03875 834 aa3.64□□□□□ -1.83
VPS54YDR027C MDJ1P35191 511 aa3.64□□□□□ -1.83
VPS54YDR027C SSN3P39073 555 aa3.64□□□□□ -1.83
VPS54YDR027C ALA1P40825 983 aaKnown RBP3.64□□□□□ -1.83
VPS54YDR027C LSB3P43603 459 aaKnown RBP3.64□□□□□ -1.83
VPS54YDR027C DIT1P21623 536 aa3.63□□□□□ -1.83
VPS54YDR027C SOH1P38633 127 aa3.63□□□□□ -1.83
VPS54YDR027C UTP7P40055 554 aaKnown RBP3.63□□□□□ -1.83
VPS54YDR027C THI72Q08579 599 aa3.63□□□□□ -1.83
VPS54YDR027C HAL5P38970 855 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms