RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeastyeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN5YDL147W SEC2P17065 759 aa8.43□□□□□ -1.06
RPN5YDL147W HEM3P28789 327 aa8.43□□□□□ -1.06
RPN5YDL147W FRA1Q07825 749 aa8.43□□□□□ -1.06
RPN5YDL147W TY1A-DR4O74302 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-HP0C2I4 478 aaKnown RBP8.42□□□□□ -1.06
RPN5YDL147W TY1A-AP0CX57 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-PR1P0CX58 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-ORP0CX59 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-PR2P0CX60 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-DR5P0CX65 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-ER2P0CX66 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-GR3P0CX67 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-LR1P0CX68 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-MR2P0CX69 440 aa8.42□□□□□ -1.06
RPN5YDL147W FIG4P42837 879 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-JR2P47099 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-DR1Q03856 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-ML1Q04706 440 aaKnown RBP8.42□□□□□ -1.06
RPN5YDL147W TY1A-BRQ12217 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-NL2Q12470 440 aa8.42□□□□□ -1.06
RPN5YDL147W TY1A-GR2Q12485 440 aa8.42□□□□□ -1.06
RPN5YDL147W PRT1P06103 763 aaKnown RBP8.41□□□□□ -1.06
RPN5YDL147W NOP7P53261 605 aaKnown RBP8.41□□□□□ -1.06
RPN5YDL147W PDC1P06169 563 aaKnown RBP8.39□□□□□ -1.07
RPN5YDL147W HAP4P14064 554 aa8.39□□□□□ -1.07
RPN5YDL147W PHO87P25360 923 aa8.39□□□□□ -1.07
RPN5YDL147W RGA1P39083 1007 aa8.39□□□□□ -1.07
RPN5YDL147W RRN7P40992 514 aa8.39□□□□□ -1.07
RPN5YDL147W UTP13Q05946 817 aaKnown RBP8.39□□□□□ -1.07
RPN5YDL147W SPT16P32558 1035 aaKnown RBP8.38□□□□□ -1.07
RPN5YDL147W SOH1P38633 127 aa8.38□□□□□ -1.07
RPN5YDL147W STM1P39015 273 aaKnown RBP8.38□□□□□ -1.07
RPN5YDL147W PAC1P39946 494 aaKnown RBP8.38□□□□□ -1.07
RPN5YDL147W SNU71P53207 620 aaKnown RBP8.38□□□□□ -1.07
RPN5YDL147W YEL077CQ3E7X8 1277 aa8.38□□□□□ -1.07
RPN5YDL147W PUF6Q04373 656 aaKnown RBP8.37□□□□□ -1.07
RPN5YDL147W HXT10P43581 546 aa8.36□□□□□ -1.07
RPN5YDL147W SEN54Q02825 467 aaPredicted RBP8.36□□□□□ -1.07
RPN5YDL147W RAS1P01119 309 aa8.35□□□□□ -1.07
RPN5YDL147W YPR084WQ06821 456 aa8.35□□□□□ -1.07
RPN5YDL147W KAR5Q04746 504 aa8.34□□□□□ -1.07
RPN5YDL147W YBL113CQ7M4S9 792 aa8.34□□□□□ -1.07
RPN5YDL147W SEC20P28791 383 aa8.33□□□□□ -1.08
RPN5YDL147W YPR015CQ12531 247 aa8.33□□□□□ -1.08
RPN5YDL147W TSC13Q99190 310 aa8.32□□□□□ -1.08
RPN5YDL147W VAC17P25591 423 aa8.31□□□□□ -1.08
RPN5YDL147W YFL034WP43564 1073 aa8.31□□□□□ -1.08
RPN5YDL147W ACS2P52910 683 aaKnown RBP8.31□□□□□ -1.08
RPN5YDL147W CWC15Q03772 175 aaKnown RBP8.31□□□□□ -1.08
RPN5YDL147W APL6P46682 809 aa8.3□□□□□ -1.08
RPN5YDL147W GAS4Q08271 471 aa8.3□□□□□ -1.08
RPN5YDL147W PDI1P17967 522 aaKnown RBP8.29□□□□□ -1.08
RPN5YDL147W TPD3P31383 635 aa8.29□□□□□ -1.08
RPN5YDL147W ERP5P38819 212 aa8.29□□□□□ -1.08
RPN5YDL147W PUN1Q06991 263 aa8.29□□□□□ -1.08
RPN5YDL147W AIM44Q99299 758 aa8.29□□□□□ -1.08
RPN5YDL147W VAN1P23642 535 aa8.29□□□□□ -1.08
RPN5YDL147W ASF1P32447 279 aa8.29□□□□□ -1.08
RPN5YDL147W ROM1P53046 1155 aa8.29□□□□□ -1.08
RPN5YDL147W RRN6P32786 894 aa8.28□□□□□ -1.08
RPN5YDL147W RRD1P40454 393 aaKnown RBP8.28□□□□□ -1.08
RPN5YDL147W PNP1Q05788 311 aa8.28□□□□□ -1.08
RPN5YDL147W GYP1Q08484 637 aa8.28□□□□□ -1.08
RPN5YDL147W SRS2P12954 1174 aa8.27□□□□□ -1.09
RPN5YDL147W IXR1P33417 597 aa8.27□□□□□ -1.09
RPN5YDL147W IPL1P38991 367 aa8.27□□□□□ -1.09
RPN5YDL147W SAS4Q04003 481 aa8.27□□□□□ -1.09
RPN5YDL147W ISR1Q06098 443 aaKnown RBP8.27□□□□□ -1.09
RPN5YDL147W MSC6Q08818 692 aaKnown RBP8.27□□□□□ -1.09
RPN5YDL147W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
RPN5YDL147W FUR4P05316 633 aaKnown RBP8.26□□□□□ -1.09
RPN5YDL147W TPS3P38426 1054 aaKnown RBP8.26□□□□□ -1.09
RPN5YDL147W MIP1P15801 1254 aa8.25□□□□□ -1.09
RPN5YDL147W KIP2P28743 706 aa8.25□□□□□ -1.09
RPN5YDL147W GRS1P38088 690 aaKnown RBP8.25□□□□□ -1.09
RPN5YDL147W ITT1Q04638 464 aa8.25□□□□□ -1.09
RPN5YDL147W TRS33Q99394 268 aa8.25□□□□□ -1.09
RPN5YDL147W MET10P39692 1035 aa8.24□□□□□ -1.09
RPN5YDL147W ATG20Q07528 640 aa8.24□□□□□ -1.09
RPN5YDL147W AIM9P40053 627 aaKnown RBP8.23□□□□□ -1.09
RPN5YDL147W MOD5P07884 428 aa8.22□□□□□ -1.09
RPN5YDL147W TRL1P09880 827 aaKnown RBP8.22□□□□□ -1.09
RPN5YDL147W YHL050CP38721 697 aa8.22□□□□□ -1.09
RPN5YDL147W YHR219WP38900 624 aa8.22□□□□□ -1.09
RPN5YDL147W CWH41P53008 833 aa8.22□□□□□ -1.09
RPN5YDL147W HDA3Q06623 655 aa8.22□□□□□ -1.09
RPN5YDL147W MRF1P30775 413 aaPredicted RBP8.21□□□□□ -1.1
RPN5YDL147W NTH2P35172 780 aa8.21□□□□□ -1.1
RPN5YDL147W HAL5P38970 855 aaKnown RBP8.21□□□□□ -1.1
RPN5YDL147W AMS1P22855 1083 aa8.2□□□□□ -1.1
RPN5YDL147W MDJ2P42834 146 aa8.2□□□□□ -1.1
RPN5YDL147W THI12P42883 340 aa8.2□□□□□ -1.1
RPN5YDL147W THI5P43534 340 aa8.2□□□□□ -1.1
RPN5YDL147W THI11P47183 340 aa8.2□□□□□ -1.1
RPN5YDL147W ATG1P53104 897 aa8.2□□□□□ -1.1
RPN5YDL147W THI13Q07748 340 aa8.2□□□□□ -1.1
RPN5YDL147W TRK1P12685 1235 aa8.18□□□□□ -1.1
RPN5YDL147W PAM1P37304 830 aaKnown RBP8.17□□□□□ -1.1
RPN5YDL147W GLO3P38682 493 aaKnown RBP8.17□□□□□ -1.1
RPN5YDL147W BOL3P39724 118 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 172 ms