RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C ISF1P32488 338 aa6.68□□□□□ -1.34
RPN4YDL020C GYP1Q08484 637 aa6.68□□□□□ -1.34
RPN4YDL020C TEC1P18412 486 aa6.67□□□□□ -1.34
RPN4YDL020C FIG4P42837 879 aa6.67□□□□□ -1.34
RPN4YDL020C EMP47P43555 445 aa6.67□□□□□ -1.34
RPN4YDL020C SAS4Q04003 481 aa6.67□□□□□ -1.34
RPN4YDL020C HXT10P43581 546 aa6.66□□□□□ -1.34
RPN4YDL020C RDS2P19541 446 aaKnown RBP6.65□□□□□ -1.34
RPN4YDL020C NOB1Q08444 459 aaKnown RBP6.65□□□□□ -1.34
RPN4YDL020C GUT2P32191 649 aa6.65□□□□□ -1.35
RPN4YDL020C PEP12P32854 288 aa6.65□□□□□ -1.35
RPN4YDL020C STE20Q03497 939 aaKnown RBP6.65□□□□□ -1.35
RPN4YDL020C PUP1P25043 261 aa6.64□□□□□ -1.35
RPN4YDL020C YPR084WQ06821 456 aa6.64□□□□□ -1.35
RPN4YDL020C FRA1Q07825 749 aa6.64□□□□□ -1.35
RPN4YDL020C MOD5P07884 428 aa6.63□□□□□ -1.35
RPN4YDL020C TPD3P31383 635 aa6.63□□□□□ -1.35
RPN4YDL020C TGL4P36165 910 aa6.63□□□□□ -1.35
RPN4YDL020C RRD1P40454 393 aaKnown RBP6.63□□□□□ -1.35
RPN4YDL020C ENV9Q08651 330 aa6.63□□□□□ -1.35
RPN4YDL020C MRX12P47084 519 aa6.62□□□□□ -1.35
RPN4YDL020C VAC17P25591 423 aa6.61□□□□□ -1.35
RPN4YDL020C YML083CQ04526 418 aa6.61□□□□□ -1.35
RPN4YDL020C TRK1P12685 1235 aa6.61□□□□□ -1.35
RPN4YDL020C KTR7P40504 517 aa6.61□□□□□ -1.35
RPN4YDL020C RPL34AP87262 121 aaPredicted RBP6.61□□□□□ -1.35
RPN4YDL020C MRF1P30775 413 aaPredicted RBP6.6□□□□□ -1.35
RPN4YDL020C ATG3P40344 310 aa6.6□□□□□ -1.35
RPN4YDL020C APL6P46682 809 aa6.57□□□□□ -1.36
RPN4YDL020C SOH1P38633 127 aa6.57□□□□□ -1.36
RPN4YDL020C SLX8P40072 274 aa6.57□□□□□ -1.36
RPN4YDL020C ECM23Q02710 187 aa6.57□□□□□ -1.36
RPN4YDL020C SDH2P21801 266 aa6.56□□□□□ -1.36
RPN4YDL020C AMS1P22855 1083 aa6.56□□□□□ -1.36
RPN4YDL020C UTP13Q05946 817 aaKnown RBP6.56□□□□□ -1.36
RPN4YDL020C GAL2P13181 574 aa6.55□□□□□ -1.36
RPN4YDL020C YPL062WQ02781 134 aa6.55□□□□□ -1.36
RPN4YDL020C YML020WQ03722 664 aa6.55□□□□□ -1.36
RPN4YDL020C ITT1Q04638 464 aa6.55□□□□□ -1.36
RPN4YDL020C KIP2P28743 706 aa6.54□□□□□ -1.36
RPN4YDL020C BDP1P46678 594 aa6.54□□□□□ -1.36
RPN4YDL020C IXR1P33417 597 aa6.53□□□□□ -1.36
RPN4YDL020C PUS5Q06244 254 aa6.53□□□□□ -1.36
RPN4YDL020C CDC3P32457 520 aaKnown RBP6.52□□□□□ -1.36
RPN4YDL020C UBX7P38349 436 aa6.52□□□□□ -1.37
RPN4YDL020C FRK1Q03002 865 aaPredicted RBP6.52□□□□□ -1.37
RPN4YDL020C PHO87P25360 923 aa6.51□□□□□ -1.37
RPN4YDL020C CST6P40535 587 aa6.51□□□□□ -1.37
RPN4YDL020C SYH1Q02875 849 aaKnown RBP6.51□□□□□ -1.37
RPN4YDL020C ISR1Q06098 443 aaKnown RBP6.51□□□□□ -1.37
RPN4YDL020C HAP4P14064 554 aa6.49□□□□□ -1.37
RPN4YDL020C HAL5P38970 855 aaKnown RBP6.49□□□□□ -1.37
RPN4YDL020C ACS2P52910 683 aaKnown RBP6.49□□□□□ -1.37
RPN4YDL020C ATG20Q07528 640 aa6.49□□□□□ -1.37
RPN4YDL020C NOP8Q08287 484 aaPredicted RBP6.49□□□□□ -1.37
RPN4YDL020C YEL077CQ3E7X8 1277 aa6.49□□□□□ -1.37
RPN4YDL020C APP1P53933 587 aa6.48□□□□□ -1.37
RPN4YDL020C TSC13Q99190 310 aa6.48□□□□□ -1.37
RPN4YDL020C EMW1P42842 904 aaKnown RBP6.48□□□□□ -1.37
RPN4YDL020C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
RPN4YDL020C MIP1P15801 1254 aa6.46□□□□□ -1.38
RPN4YDL020C PDI1P17967 522 aaKnown RBP6.46□□□□□ -1.38
RPN4YDL020C ROM1P53046 1155 aa6.46□□□□□ -1.38
RPN4YDL020C YFL034WP43564 1073 aa6.45□□□□□ -1.38
RPN4YDL020C HDA3Q06623 655 aa6.45□□□□□ -1.38
RPN4YDL020C GAS4Q08271 471 aa6.45□□□□□ -1.38
RPN4YDL020C AIM9P40053 627 aaKnown RBP6.44□□□□□ -1.38
RPN4YDL020C PUF6Q04373 656 aaKnown RBP6.44□□□□□ -1.38
RPN4YDL020C HAT1Q12341 374 aa6.44□□□□□ -1.38
RPN4YDL020C SSF1P38789 453 aaPredicted RBP6.43□□□□□ -1.38
RPN4YDL020C CWC15Q03772 175 aaKnown RBP6.43□□□□□ -1.38
RPN4YDL020C MRT4P33201 236 aaKnown RBP6.42□□□□□ -1.38
RPN4YDL020C MKS1P34072 584 aa6.42□□□□□ -1.38
RPN4YDL020C ISU1Q03020 165 aa6.42□□□□□ -1.38
RPN4YDL020C FBP26P32604 452 aa6.41□□□□□ -1.38
RPN4YDL020C TPS3P38426 1054 aaKnown RBP6.41□□□□□ -1.38
RPN4YDL020C HED1Q03937 162 aa6.41□□□□□ -1.38
RPN4YDL020C NTH2P35172 780 aa6.4□□□□□ -1.38
RPN4YDL020C SPT2P06843 333 aaPredicted RBP6.4□□□□□ -1.39
RPN4YDL020C VAN1P23642 535 aa6.4□□□□□ -1.39
RPN4YDL020C UTR2P32623 467 aa6.4□□□□□ -1.39
RPN4YDL020C SLD2P34252 453 aa6.4□□□□□ -1.39
RPN4YDL020C PUN1Q06991 263 aa6.39□□□□□ -1.39
RPN4YDL020C RPS6AP0CX37 236 aaKnown RBP6.38□□□□□ -1.39
RPN4YDL020C RPS6BP0CX38 236 aaPredicted RBP6.38□□□□□ -1.39
RPN4YDL020C YBL086CP38177 466 aa6.38□□□□□ -1.39
RPN4YDL020C DFG5Q05031 458 aa6.38□□□□□ -1.39
RPN4YDL020C SRS2P12954 1174 aa6.37□□□□□ -1.39
RPN4YDL020C DAT1P13483 248 aaKnown RBP6.37□□□□□ -1.39
RPN4YDL020C KAR5Q04746 504 aa6.37□□□□□ -1.39
RPN4YDL020C PNP1Q05788 311 aa6.37□□□□□ -1.39
RPN4YDL020C TRS33Q99394 268 aa6.37□□□□□ -1.39
RPN4YDL020C CYT1P07143 309 aa6.36□□□□□ -1.39
RPN4YDL020C SWI5P08153 709 aa6.36□□□□□ -1.39
RPN4YDL020C STE6P12866 1290 aa6.36□□□□□ -1.39
RPN4YDL020C TBS1P38114 1094 aa6.36□□□□□ -1.39
RPN4YDL020C CLA4P48562 842 aa6.36□□□□□ -1.39
RPN4YDL020C YBL113CQ7M4S9 792 aa6.36□□□□□ -1.39
RPN4YDL020C RPP2BP02400 110 aaKnown RBP6.35□□□□□ -1.39
RPN4YDL020C UBP1P25037 809 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms