RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C GYP1Q08484 637 aa7.91□□□□□ -1.14
YPK3YBR028C GEF1P37020 779 aa7.9□□□□□ -1.14
YPK3YBR028C SAS4Q04003 481 aa7.9□□□□□ -1.14
YPK3YBR028C PUP1P25043 261 aa7.89□□□□□ -1.15
YPK3YBR028C TPD3P31383 635 aa7.89□□□□□ -1.15
YPK3YBR028C SIS2P36024 562 aa7.89□□□□□ -1.15
YPK3YBR028C RRD1P40454 393 aaKnown RBP7.89□□□□□ -1.15
YPK3YBR028C FRA1Q07825 749 aa7.89□□□□□ -1.15
YPK3YBR028C YML083CQ04526 418 aa7.88□□□□□ -1.15
YPK3YBR028C GUT2P32191 649 aa7.87□□□□□ -1.15
YPK3YBR028C TGL4P36165 910 aa7.87□□□□□ -1.15
YPK3YBR028C SDH2P21801 266 aa7.86□□□□□ -1.15
YPK3YBR028C VAC17P25591 423 aa7.86□□□□□ -1.15
YPK3YBR028C STE20Q03497 939 aaKnown RBP7.86□□□□□ -1.15
YPK3YBR028C VRP1P37370 817 aa7.84□□□□□ -1.15
YPK3YBR028C APL6P46682 809 aa7.84□□□□□ -1.15
YPK3YBR028C MRX12P47084 519 aa7.83□□□□□ -1.16
YPK3YBR028C KTR7P40504 517 aa7.82□□□□□ -1.16
YPK3YBR028C ITT1Q04638 464 aa7.82□□□□□ -1.16
YPK3YBR028C ENV9Q08651 330 aa7.82□□□□□ -1.16
YPK3YBR028C MRF1P30775 413 aaPredicted RBP7.79□□□□□ -1.16
YPK3YBR028C ECM23Q02710 187 aa7.79□□□□□ -1.16
YPK3YBR028C SOH1P38633 127 aa7.78□□□□□ -1.16
YPK3YBR028C BDP1P46678 594 aa7.78□□□□□ -1.16
YPK3YBR028C ATG3P40344 310 aa7.77□□□□□ -1.17
YPK3YBR028C CST6P40535 587 aa7.77□□□□□ -1.17
YPK3YBR028C RPL34AP87262 121 aaPredicted RBP7.77□□□□□ -1.17
YPK3YBR028C UTP13Q05946 817 aaKnown RBP7.77□□□□□ -1.17
YPK3YBR028C PUS5Q06244 254 aa7.77□□□□□ -1.17
YPK3YBR028C GAL2P13181 574 aa7.76□□□□□ -1.17
YPK3YBR028C YML020WQ03722 664 aa7.76□□□□□ -1.17
YPK3YBR028C BCK2P33306 851 aa7.76□□□□□ -1.17
YPK3YBR028C IXR1P33417 597 aa7.76□□□□□ -1.17
YPK3YBR028C SLX8P40072 274 aa7.76□□□□□ -1.17
YPK3YBR028C HAL5P38970 855 aaKnown RBP7.74□□□□□ -1.17
YPK3YBR028C FRK1Q03002 865 aaPredicted RBP7.74□□□□□ -1.17
YPK3YBR028C KIP2P28743 706 aa7.72□□□□□ -1.17
YPK3YBR028C UBX7P38349 436 aa7.72□□□□□ -1.17
YPK3YBR028C PHO87P25360 923 aa7.71□□□□□ -1.17
YPK3YBR028C CDC3P32457 520 aaKnown RBP7.71□□□□□ -1.17
YPK3YBR028C ACS2P52910 683 aaKnown RBP7.71□□□□□ -1.17
YPK3YBR028C ISR1Q06098 443 aaKnown RBP7.71□□□□□ -1.17
YPK3YBR028C NOP8Q08287 484 aaPredicted RBP7.71□□□□□ -1.17
YPK3YBR028C SYH1Q02875 849 aaKnown RBP7.71□□□□□ -1.18
YPK3YBR028C EMW1P42842 904 aaKnown RBP7.7□□□□□ -1.18
YPK3YBR028C APP1P53933 587 aa7.7□□□□□ -1.18
YPK3YBR028C ATG20Q07528 640 aa7.69□□□□□ -1.18
YPK3YBR028C XDJ1P39102 459 aa7.68□□□□□ -1.18
YPK3YBR028C ROM1P53046 1155 aa7.68□□□□□ -1.18
YPK3YBR028C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
YPK3YBR028C YEL077CQ3E7X8 1277 aa7.68□□□□□ -1.18
YPK3YBR028C HAP4P14064 554 aa7.67□□□□□ -1.18
YPK3YBR028C TSC13Q99190 310 aa7.67□□□□□ -1.18
YPK3YBR028C MIP1P15801 1254 aa7.67□□□□□ -1.18
YPK3YBR028C PDI1P17967 522 aaKnown RBP7.67□□□□□ -1.18
YPK3YBR028C TPS3P38426 1054 aaKnown RBP7.66□□□□□ -1.18
YPK3YBR028C HDA3Q06623 655 aa7.66□□□□□ -1.18
YPK3YBR028C AMS1P22855 1083 aa7.64□□□□□ -1.19
YPK3YBR028C AIM9P40053 627 aaKnown RBP7.64□□□□□ -1.19
YPK3YBR028C MRT4P33201 236 aaKnown RBP7.63□□□□□ -1.19
YPK3YBR028C CWC15Q03772 175 aaKnown RBP7.63□□□□□ -1.19
YPK3YBR028C GAS4Q08271 471 aa7.63□□□□□ -1.19
YPK3YBR028C SSF1P38789 453 aaPredicted RBP7.63□□□□□ -1.19
YPK3YBR028C HAT1Q12341 374 aa7.62□□□□□ -1.19
YPK3YBR028C FBP26P32604 452 aa7.61□□□□□ -1.19
YPK3YBR028C MKS1P34072 584 aa7.61□□□□□ -1.19
YPK3YBR028C YFL034WP43564 1073 aa7.61□□□□□ -1.19
YPK3YBR028C CLA4P48562 842 aa7.61□□□□□ -1.19
YPK3YBR028C ISU1Q03020 165 aa7.61□□□□□ -1.19
YPK3YBR028C HED1Q03937 162 aa7.6□□□□□ -1.19
YPK3YBR028C PUF6Q04373 656 aaKnown RBP7.6□□□□□ -1.19
YPK3YBR028C RAS1P01119 309 aa7.59□□□□□ -1.19
YPK3YBR028C SPT2P06843 333 aaPredicted RBP7.59□□□□□ -1.19
YPK3YBR028C YBL086CP38177 466 aa7.59□□□□□ -1.19
YPK3YBR028C NTH2P35172 780 aa7.59□□□□□ -1.2
YPK3YBR028C UTR2P32623 467 aa7.58□□□□□ -1.2
YPK3YBR028C DFG5Q05031 458 aa7.57□□□□□ -1.2
YPK3YBR028C MET32Q12041 191 aa7.57□□□□□ -1.2
YPK3YBR028C SWI5P08153 709 aa7.56□□□□□ -1.2
YPK3YBR028C RPS6AP0CX37 236 aaKnown RBP7.56□□□□□ -1.2
YPK3YBR028C RPS6BP0CX38 236 aaPredicted RBP7.56□□□□□ -1.2
YPK3YBR028C STE6P12866 1290 aa7.56□□□□□ -1.2
YPK3YBR028C VAN1P23642 535 aa7.56□□□□□ -1.2
YPK3YBR028C UBP1P25037 809 aa7.55□□□□□ -1.2
YPK3YBR028C PNP1Q05788 311 aa7.55□□□□□ -1.2
YPK3YBR028C PUN1Q06991 263 aa7.55□□□□□ -1.2
YPK3YBR028C SUV3P32580 737 aa7.54□□□□□ -1.2
YPK3YBR028C CYT1P07143 309 aa7.54□□□□□ -1.2
YPK3YBR028C SRS2P12954 1174 aa7.54□□□□□ -1.2
YPK3YBR028C BOL3P39724 118 aa7.54□□□□□ -1.2
YPK3YBR028C SEN54Q02825 467 aaPredicted RBP7.54□□□□□ -1.2
YPK3YBR028C WTM2Q12206 467 aa7.54□□□□□ -1.2
YPK3YBR028C YBL113CQ7M4S9 792 aa7.54□□□□□ -1.2
YPK3YBR028C TRS33Q99394 268 aa7.54□□□□□ -1.2
YPK3YBR028C DAT1P13483 248 aaKnown RBP7.53□□□□□ -1.2
YPK3YBR028C ERP5P38819 212 aa7.53□□□□□ -1.2
YPK3YBR028C AIR1P40507 360 aaKnown RBP7.53□□□□□ -1.2
YPK3YBR028C KAR5Q04746 504 aa7.53□□□□□ -1.2
YPK3YBR028C ALD4P46367 519 aaKnown RBP7.52□□□□□ -1.21
YPK3YBR028C BDS1Q08347 646 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms