RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 FAM205CA6NFA0 338 aa7.83□□□□□ -1.16
CASC19-278ENST00000642088 HOXB1P14653 301 aaPredicted RBP7.83□□□□□ -1.16
CASC19-278ENST00000642088 FAM161AQ3B820 660 aa7.83□□□□□ -1.16
CASC19-278ENST00000642088 ADAM33Q9BZ11 813 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 MAP3K7O43318 606 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 PHF14O94880 888 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 ZNF710Q8N1W2 664 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 ZNF454Q8N9F8 522 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
CASC19-278ENST00000642088 RIMBP2O15034 1052 aa7.81□□□□□ -1.16
CASC19-278ENST00000642088 ZCCHC6Q5VYS8 1495 aaKnown RBP7.81□□□□□ -1.16
CASC19-278ENST00000642088 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
CASC19-278ENST00000642088 SPNS2Q8IVW8 549 aa7.79□□□□□ -1.16
CASC19-278ENST00000642088 KRI1Q8N9T8 703 aaKnown RBP7.79□□□□□ -1.16
CASC19-278ENST00000642088 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
CASC19-278ENST00000642088 TRIM66O15016 1216 aa7.79□□□□□ -1.16
CASC19-278ENST00000642088 GNPATO15228 680 aa7.79□□□□□ -1.16
CASC19-278ENST00000642088 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
CASC19-278ENST00000642088 NEUROD2Q15784 382 aa7.78□□□□□ -1.16
CASC19-278ENST00000642088 NLRP7Q8WX94 980 aa7.78□□□□□ -1.16
CASC19-278ENST00000642088 C3orf80F5H4A9 247 aa7.77□□□□□ -1.17
CASC19-278ENST00000642088 COL9A1P20849 921 aa7.77□□□□□ -1.17
CASC19-278ENST00000642088 TYW1BQ6NUM6 668 aa7.77□□□□□ -1.17
CASC19-278ENST00000642088 C6orf132Q5T0Z8 1188 aa7.77□□□□□ -1.17
CASC19-278ENST00000642088 IRF6O14896 467 aa7.76□□□□□ -1.17
CASC19-278ENST00000642088 FCHSD2O94868 740 aa7.76□□□□□ -1.17
CASC19-278ENST00000642088 ZNF316A6NFI3 1004 aaPredicted RBP7.75□□□□□ -1.17
CASC19-278ENST00000642088 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 HIC1Q14526 733 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 AK7Q96M32 723 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 EPAS1Q99814 870 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 FAM198AQ9UFP1 575 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 MAP2K5Q13163 448 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 POTEEQ6S8J3 1075 aa7.75□□□□□ -1.17
CASC19-278ENST00000642088 REPIN1Q9BWE0 567 aaKnown RBP7.75□□□□□ -1.17
CASC19-278ENST00000642088 PDE4DQ08499 809 aa7.74□□□□□ -1.17
CASC19-278ENST00000642088 PADI6Q6TGC4 694 aa7.73□□□□□ -1.17
CASC19-278ENST00000642088 ERBB3P21860 1342 aa7.72□□□□□ -1.17
CASC19-278ENST00000642088 MINK1Q8N4C8 1332 aaPredicted RBP7.72□□□□□ -1.17
CASC19-278ENST00000642088 VARS2Q5ST30 1063 aaKnown RBP7.71□□□□□ -1.17
CASC19-278ENST00000642088 FBXW7Q969H0 707 aa7.71□□□□□ -1.17
CASC19-278ENST00000642088 DCAF1Q9Y4B6 1507 aa7.71□□□□□ -1.18
CASC19-278ENST00000642088 PARP9Q8IXQ6 854 aa7.71□□□□□ -1.18
CASC19-278ENST00000642088 KDM4CQ9H3R0 1056 aa7.71□□□□□ -1.18
CASC19-278ENST00000642088 AXIN2Q9Y2T1 843 aa7.7□□□□□ -1.18
CASC19-278ENST00000642088 PSEN2P49810 448 aa7.69□□□□□ -1.18
CASC19-278ENST00000642088 PROX2Q3B8N5 592 aa7.69□□□□□ -1.18
CASC19-278ENST00000642088 FAM117AQ9C073 453 aa7.69□□□□□ -1.18
CASC19-278ENST00000642088 BCL2L12Q9HB09 334 aa7.69□□□□□ -1.18
CASC19-278ENST00000642088 TSKSQ9UJT2 592 aa7.69□□□□□ -1.18
CASC19-278ENST00000642088 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
CASC19-278ENST00000642088 IL27Q8NEV9 243 aa7.67□□□□□ -1.18
CASC19-278ENST00000642088 CDCA7LQ96GN5 454 aa7.67□□□□□ -1.18
CASC19-278ENST00000642088 PPP4R3BQ5MIZ7 849 aa7.67□□□□□ -1.18
CASC19-278ENST00000642088 KCNK17Q96T54 332 aa7.67□□□□□ -1.18
CASC19-278ENST00000642088 AMHR2Q16671 573 aa7.66□□□□□ -1.18
CASC19-278ENST00000642088 ADGRG1Q9Y653 693 aa7.66□□□□□ -1.18
CASC19-278ENST00000642088 MS4A1P11836 297 aa7.66□□□□□ -1.18
CASC19-278ENST00000642088 METTL3Q86U44 580 aaKnown RBP7.66□□□□□ -1.18
CASC19-278ENST00000642088 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
CASC19-278ENST00000642088 SMAPO00193 183 aa7.65□□□□□ -1.18
CASC19-278ENST00000642088 PRSS12P56730 875 aa7.65□□□□□ -1.18
CASC19-278ENST00000642088 MDM2Q00987 491 aaPredicted RBP7.64□□□□□ -1.19
CASC19-278ENST00000642088 DMRTA1Q5VZB9 504 aa7.64□□□□□ -1.19
CASC19-278ENST00000642088 PSDA5PKW4 1024 aaPredicted RBP7.64□□□□□ -1.19
CASC19-278ENST00000642088 ZNF687Q8N1G0 1237 aa7.64□□□□□ -1.19
CASC19-278ENST00000642088 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
CASC19-278ENST00000642088 GIGYF2Q6Y7W6 1299 aaKnown RBP7.63□□□□□ -1.19
CASC19-278ENST00000642088 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
CASC19-278ENST00000642088 TMEM132AQ24JP5 1023 aa7.63□□□□□ -1.19
CASC19-278ENST00000642088 TMUB1Q9BVT8 246 aa7.63□□□□□ -1.19
CASC19-278ENST00000642088 PTPREP23469 700 aa7.62□□□□□ -1.19
CASC19-278ENST00000642088 PPP1R3GB7ZBB8 358 aa7.61□□□□□ -1.19
CASC19-278ENST00000642088 NUDT18Q6ZVK8 323 aa7.6□□□□□ -1.19
CASC19-278ENST00000642088 EYA1Q99502 592 aa7.6□□□□□ -1.19
CASC19-278ENST00000642088 ZBED2Q9BTP6 218 aa7.59□□□□□ -1.19
CASC19-278ENST00000642088 SHROOM4Q9ULL8 1493 aa7.59□□□□□ -1.19
CASC19-278ENST00000642088 MYO15BQ96JP2 1530 aa7.58□□□□□ -1.2
CASC19-278ENST00000642088 TRIM6-TRIM34B2RNG4 842 aa7.58□□□□□ -1.2
CASC19-278ENST00000642088 CERKQ8TCT0 537 aa7.58□□□□□ -1.2
CASC19-278ENST00000642088 RBM27Q9P2N5 1060 aaKnown RBP7.58□□□□□ -1.2
CASC19-278ENST00000642088 KIAA1468Q9P260 1216 aa7.57□□□□□ -1.2
CASC19-278ENST00000642088 SEPT9Q9UHD8 586 aaPredicted RBP7.57□□□□□ -1.2
CASC19-278ENST00000642088 RCCD1A6NED2 376 aa7.56□□□□□ -1.2
CASC19-278ENST00000642088 GTF3C3Q9Y5Q9 886 aa7.56□□□□□ -1.2
CASC19-278ENST00000642088 TATDN2Q93075 761 aa7.56□□□□□ -1.2
CASC19-278ENST00000642088 PNMA3Q9UL41 463 aa7.56□□□□□ -1.2
CASC19-278ENST00000642088 ARHGAP33O14559 1287 aa7.55□□□□□ -1.2
CASC19-278ENST00000642088 GPCPD1Q9NPB8 672 aa7.55□□□□□ -1.2
CASC19-278ENST00000642088 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
CASC19-278ENST00000642088 PBX2P40425 430 aa7.55□□□□□ -1.2
CASC19-278ENST00000642088 TIMELESSQ9UNS1 1208 aa7.55□□□□□ -1.2
CASC19-278ENST00000642088 OATP04181 439 aa7.54□□□□□ -1.2
CASC19-278ENST00000642088 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
CASC19-278ENST00000642088 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
CASC19-278ENST00000642088 VPS9D1Q9Y2B5 631 aa7.53□□□□□ -1.2
CASC19-278ENST00000642088 ONECUT3O60422 494 aaPredicted RBP7.52□□□□□ -1.21
CASC19-278ENST00000642088 CLCN1P35523 988 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms