RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
CASC19-227ENST00000641411 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CASC19-227ENST00000641411 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
CASC19-227ENST00000641411 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
CASC19-227ENST00000641411 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
CASC19-227ENST00000641411 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
CASC19-227ENST00000641411 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
CASC19-227ENST00000641411 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
CASC19-227ENST00000641411 PHF14O94880 888 aa12.91□□□□□ -0.34
CASC19-227ENST00000641411 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
CASC19-227ENST00000641411 PTPN5P54829 565 aa12.9□□□□□ -0.34
CASC19-227ENST00000641411 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
CASC19-227ENST00000641411 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CASC19-227ENST00000641411 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
CASC19-227ENST00000641411 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
CASC19-227ENST00000641411 COL9A1P20849 921 aa12.87□□□□□ -0.35
CASC19-227ENST00000641411 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
CASC19-227ENST00000641411 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-227ENST00000641411 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CASC19-227ENST00000641411 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CASC19-227ENST00000641411 WIZO95785 1651 aa12.81□□□□□ -0.36
CASC19-227ENST00000641411 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CASC19-227ENST00000641411 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CASC19-227ENST00000641411 RGS20O76081 388 aa12.8□□□□□ -0.36
CASC19-227ENST00000641411 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
CASC19-227ENST00000641411 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CASC19-227ENST00000641411 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
CASC19-227ENST00000641411 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
CASC19-227ENST00000641411 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CASC19-227ENST00000641411 A0A0G2JS52 829 aa12.76□□□□□ -0.37
CASC19-227ENST00000641411 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
CASC19-227ENST00000641411 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
CASC19-227ENST00000641411 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
CASC19-227ENST00000641411 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
CASC19-227ENST00000641411 PDIA6Q15084 440 aa12.72□□□□□ -0.37
CASC19-227ENST00000641411 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
CASC19-227ENST00000641411 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
CASC19-227ENST00000641411 BCAMP50895 628 aa12.7□□□□□ -0.38
CASC19-227ENST00000641411 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
CASC19-227ENST00000641411 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CASC19-227ENST00000641411 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
CASC19-227ENST00000641411 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
CASC19-227ENST00000641411 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
CASC19-227ENST00000641411 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
CASC19-227ENST00000641411 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
CASC19-227ENST00000641411 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CASC19-227ENST00000641411 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
CASC19-227ENST00000641411 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-227ENST00000641411 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
CASC19-227ENST00000641411 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
CASC19-227ENST00000641411 NBR1Q14596 966 aa12.62□□□□□ -0.39
CASC19-227ENST00000641411 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
CASC19-227ENST00000641411 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
CASC19-227ENST00000641411 MAP3K7O43318 606 aa12.58□□□□□ -0.4
CASC19-227ENST00000641411 E2F4Q16254 413 aa12.58□□□□□ -0.4
CASC19-227ENST00000641411 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
CASC19-227ENST00000641411 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
CASC19-227ENST00000641411 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CASC19-227ENST00000641411 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
CASC19-227ENST00000641411 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
CASC19-227ENST00000641411 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
CASC19-227ENST00000641411 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CASC19-227ENST00000641411 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
CASC19-227ENST00000641411 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
CASC19-227ENST00000641411 KCNC4Q03721 635 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CASC19-227ENST00000641411 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
CASC19-227ENST00000641411 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
CASC19-227ENST00000641411 PRSS12P56730 875 aa12.52□□□□□ -0.41
CASC19-227ENST00000641411 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
CASC19-227ENST00000641411 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
CASC19-227ENST00000641411 OSBPP22059 807 aa12.48□□□□□ -0.41
CASC19-227ENST00000641411 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CASC19-227ENST00000641411 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
CASC19-227ENST00000641411 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
CASC19-227ENST00000641411 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
CASC19-227ENST00000641411 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 SMAPO00193 183 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
CASC19-227ENST00000641411 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
CASC19-227ENST00000641411 TATDN2Q93075 761 aa12.43□□□□□ -0.42
CASC19-227ENST00000641411 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
CASC19-227ENST00000641411 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
CASC19-227ENST00000641411 PPP4CP60510 307 aa12.42□□□□□ -0.42
CASC19-227ENST00000641411 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
CASC19-227ENST00000641411 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
CASC19-227ENST00000641411 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
CASC19-227ENST00000641411 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
CASC19-227ENST00000641411 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
CASC19-227ENST00000641411 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
CASC19-227ENST00000641411 MTRQ99707 1265 aa12.34□□□□□ -0.43
CASC19-227ENST00000641411 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
CASC19-227ENST00000641411 EEA1Q15075 1411 aa12.32□□□□□ -0.44
CASC19-227ENST00000641411 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
CASC19-227ENST00000641411 APLP1P51693 650 aa12.3□□□□□ -0.44
CASC19-227ENST00000641411 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
CASC19-227ENST00000641411 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms