RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 APAF1O14727 1248 aa18.21■□□□□ 0.51
SCARB2-208ENST00000638372 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
SCARB2-208ENST00000638372 MINK1Q8N4C8 1332 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-208ENST00000638372 CCDC7Q96M83 1385 aa18.2■□□□□ 0.5
SCARB2-208ENST00000638372 ELL2O00472 640 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-208ENST00000638372 PTMAP06454 111 aaKnown RBP18.19■□□□□ 0.5
SCARB2-208ENST00000638372 WASHC2AQ641Q2 1341 aa18.19■□□□□ 0.5
SCARB2-208ENST00000638372 EXOC6Q8TAG9 804 aa18.19■□□□□ 0.5
SCARB2-208ENST00000638372 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
SCARB2-208ENST00000638372 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
SCARB2-208ENST00000638372 LTV1Q96GA3 475 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-208ENST00000638372 CUX1P39880 1505 aa18.18■□□□□ 0.5
SCARB2-208ENST00000638372 PLCB2Q00722 1185 aa18.17■□□□□ 0.5
SCARB2-208ENST00000638372 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
SCARB2-208ENST00000638372 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
SCARB2-208ENST00000638372 FYCO1Q9BQS8 1478 aa18.16■□□□□ 0.5
SCARB2-208ENST00000638372 CSB-PGBD3P0DP91 1061 aa18.16■□□□□ 0.5
SCARB2-208ENST00000638372 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
SCARB2-208ENST00000638372 SLC4A10Q6U841 1118 aa18.15■□□□□ 0.5
SCARB2-208ENST00000638372 PMFBP1Q8TBY8 1022 aa18.15■□□□□ 0.5
SCARB2-208ENST00000638372 AMPHP49418 695 aa18.15■□□□□ 0.5
SCARB2-208ENST00000638372 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
SCARB2-208ENST00000638372 CGNL1Q0VF96 1302 aa18.15■□□□□ 0.5
SCARB2-208ENST00000638372 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
SCARB2-208ENST00000638372 STK31Q9BXU1 1019 aa18.14■□□□□ 0.49
SCARB2-208ENST00000638372 NPHP1O15259 732 aa18.14■□□□□ 0.49
SCARB2-208ENST00000638372 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
SCARB2-208ENST00000638372 ZRSR1Q15695 479 aaKnown RBP18.14■□□□□ 0.49
SCARB2-208ENST00000638372 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-208ENST00000638372 MFAP1P55081 439 aaKnown RBP18.14■□□□□ 0.49
SCARB2-208ENST00000638372 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-208ENST00000638372 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
SCARB2-208ENST00000638372 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
SCARB2-208ENST00000638372 CRBNQ96SW2 442 aa18.11■□□□□ 0.49
SCARB2-208ENST00000638372 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
SCARB2-208ENST00000638372 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
SCARB2-208ENST00000638372 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
SCARB2-208ENST00000638372 NBPF8Q3BBV2 869 aa18.1■□□□□ 0.49
SCARB2-208ENST00000638372 TMEM132EQ6IEE7 984 aa18.1■□□□□ 0.49
SCARB2-208ENST00000638372 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
SCARB2-208ENST00000638372 E9PSI1 815 aa18.09■□□□□ 0.49
SCARB2-208ENST00000638372 MCCP23508 829 aa18.09■□□□□ 0.49
SCARB2-208ENST00000638372 DNTTIP2Q5QJE6 756 aaKnown RBP18.08■□□□□ 0.48
SCARB2-208ENST00000638372 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-208ENST00000638372 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-208ENST00000638372 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
SCARB2-208ENST00000638372 FAM69CQ0P6D2 419 aa18.06■□□□□ 0.48
SCARB2-208ENST00000638372 COG3Q96JB2 828 aa18.06■□□□□ 0.48
SCARB2-208ENST00000638372 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
SCARB2-208ENST00000638372 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
SCARB2-208ENST00000638372 PDE4AP27815 886 aa18.05■□□□□ 0.48
SCARB2-208ENST00000638372 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
SCARB2-208ENST00000638372 KIAA1211Q6ZU35 1233 aa18.04■□□□□ 0.48
SCARB2-208ENST00000638372 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
SCARB2-208ENST00000638372 GLIPR1L2Q4G1C9 344 aa18.03■□□□□ 0.48
SCARB2-208ENST00000638372 GOLGA6L4A6NEF3 574 aa18.03■□□□□ 0.48
SCARB2-208ENST00000638372 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
SCARB2-208ENST00000638372 CENPQQ7L2Z9 268 aaPredicted RBP18.02■□□□□ 0.48
SCARB2-208ENST00000638372 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.47
SCARB2-208ENST00000638372 CFAP44Q96MT7 982 aa18.02■□□□□ 0.47
SCARB2-208ENST00000638372 GGNBP2Q9H3C7 697 aa18.02■□□□□ 0.47
SCARB2-208ENST00000638372 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
SCARB2-208ENST00000638372 HMMRO75330 724 aa18.01■□□□□ 0.47
SCARB2-208ENST00000638372 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
SCARB2-208ENST00000638372 DIAPH1O60610 1272 aaKnown RBP18■□□□□ 0.47
SCARB2-208ENST00000638372 CABP2Q9NPB3 220 aa18■□□□□ 0.47
SCARB2-208ENST00000638372 HFM1A2PYH4 1435 aa17.99■□□□□ 0.47
SCARB2-208ENST00000638372 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
SCARB2-208ENST00000638372 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
SCARB2-208ENST00000638372 NAP1L5Q96NT1 182 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-208ENST00000638372 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
SCARB2-208ENST00000638372 RIPK4P57078 832 aa17.98■□□□□ 0.47
SCARB2-208ENST00000638372 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
SCARB2-208ENST00000638372 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
SCARB2-208ENST00000638372 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
SCARB2-208ENST00000638372 CHMP3Q9Y3E7 222 aa17.97■□□□□ 0.47
SCARB2-208ENST00000638372 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
SCARB2-208ENST00000638372 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
SCARB2-208ENST00000638372 ANKRD45Q5TZF3 282 aa17.97■□□□□ 0.47
SCARB2-208ENST00000638372 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
SCARB2-208ENST00000638372 TROQ12816 1431 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-208ENST00000638372 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
SCARB2-208ENST00000638372 FAM161AQ3B820 660 aa17.96■□□□□ 0.46
SCARB2-208ENST00000638372 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.46
SCARB2-208ENST00000638372 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
SCARB2-208ENST00000638372 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
SCARB2-208ENST00000638372 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
SCARB2-208ENST00000638372 HMOX1P09601 288 aa17.95■□□□□ 0.46
SCARB2-208ENST00000638372 MTHFSP49914 203 aa17.94■□□□□ 0.46
SCARB2-208ENST00000638372 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
SCARB2-208ENST00000638372 RUNDC1Q96C34 613 aa17.94■□□□□ 0.46
SCARB2-208ENST00000638372 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
SCARB2-208ENST00000638372 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
SCARB2-208ENST00000638372 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
SCARB2-208ENST00000638372 L1TD1Q5T7N2 865 aaKnown RBP17.92■□□□□ 0.46
SCARB2-208ENST00000638372 CDK11BP21127 795 aaKnown RBP17.92■□□□□ 0.46
SCARB2-208ENST00000638372 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
SCARB2-208ENST00000638372 EHBP1L1Q8N3D4 1523 aa17.92■□□□□ 0.46
SCARB2-208ENST00000638372 NAIPQ13075 1403 aa17.91■□□□□ 0.46
SCARB2-208ENST00000638372 TULP1O00294 542 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms