RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 CPLX2Q6PUV4 134 aaKnown RBP22.19■■□□□ 1.14
CACNA1A-247ENST00000637769 AMOTL1Q8IY63 956 aa22.19■■□□□ 1.14
CACNA1A-247ENST00000637769 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
CACNA1A-247ENST00000637769 RUFY1Q96T51 708 aa22.18■■□□□ 1.14
CACNA1A-247ENST00000637769 APBB1O00213 710 aa22.18■■□□□ 1.14
CACNA1A-247ENST00000637769 NACADO15069 1562 aa22.17■■□□□ 1.14
CACNA1A-247ENST00000637769 PDE3BQ13370 1112 aa22.16■■□□□ 1.14
CACNA1A-247ENST00000637769 TERF2IPQ9NYB0 399 aa22.16■■□□□ 1.14
CACNA1A-247ENST00000637769 MYO6Q9UM54 1294 aa22.16■■□□□ 1.14
CACNA1A-247ENST00000637769 MTERF4Q7Z6M4 381 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-247ENST00000637769 FAM184AQ8NB25 1140 aa22.15■■□□□ 1.14
CACNA1A-247ENST00000637769 SMC4Q9NTJ3 1288 aa22.15■■□□□ 1.14
CACNA1A-247ENST00000637769 ZNF771Q7L3S4 317 aaPredicted RBP22.15■■□□□ 1.14
CACNA1A-247ENST00000637769 CCAR2Q8N163 923 aaKnown RBP22.15■■□□□ 1.14
CACNA1A-247ENST00000637769 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.14
CACNA1A-247ENST00000637769 ARGLU1Q9NWB6 273 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-247ENST00000637769 U2AF1L5P0DN76 240 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-247ENST00000637769 U2AF1Q01081 240 aaKnown RBP eCLIP22.14■■□□□ 1.14
CACNA1A-247ENST00000637769 PDE4CQ08493 712 aa22.14■■□□□ 1.14
CACNA1A-247ENST00000637769 MFAP1P55081 439 aaKnown RBP22.14■■□□□ 1.13
CACNA1A-247ENST00000637769 SYNE3Q6ZMZ3 975 aa22.14■■□□□ 1.13
CACNA1A-247ENST00000637769 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-247ENST00000637769 SETD5Q9C0A6 1442 aa22.12■■□□□ 1.13
CACNA1A-247ENST00000637769 CCDC191Q8NCU4 936 aa22.11■■□□□ 1.13
CACNA1A-247ENST00000637769 CWC15Q9P013 229 aaKnown RBP22.11■■□□□ 1.13
CACNA1A-247ENST00000637769 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-247ENST00000637769 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
CACNA1A-247ENST00000637769 TRIM29Q14134 588 aa22.09■■□□□ 1.13
CACNA1A-247ENST00000637769 HSP90B2PQ58FF3 399 aa22.09■■□□□ 1.13
CACNA1A-247ENST00000637769 CCDC173Q0VFZ6 552 aa22.08■■□□□ 1.13
CACNA1A-247ENST00000637769 RUFY2Q8WXA3 655 aa22.08■■□□□ 1.13
CACNA1A-247ENST00000637769 NOL10Q9BSC4 688 aaKnown RBP22.08■■□□□ 1.13
CACNA1A-247ENST00000637769 REC8O95072 547 aa22.08■■□□□ 1.13
CACNA1A-247ENST00000637769 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.12
CACNA1A-247ENST00000637769 ROCK1Q13464 1354 aa22.07■■□□□ 1.12
CACNA1A-247ENST00000637769 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-247ENST00000637769 PAK3O75914 559 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-247ENST00000637769 ZNF330Q9Y3S2 320 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-247ENST00000637769 SOX12O15370 315 aa22.06■■□□□ 1.12
CACNA1A-247ENST00000637769 ZRSR2Q15696 482 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-247ENST00000637769 ODF2Q5BJF6 829 aa22.05■■□□□ 1.12
CACNA1A-247ENST00000637769 SENP3-EIF4A1A0A087X0R7 540 aa22.04■■□□□ 1.12
CACNA1A-247ENST00000637769 TRIM34Q9BYJ4 488 aa22.04■■□□□ 1.12
CACNA1A-247ENST00000637769 TOMM22Q9NS69 142 aa22.03■■□□□ 1.12
CACNA1A-247ENST00000637769 WWC1Q8IX03 1113 aa22.03■■□□□ 1.12
CACNA1A-247ENST00000637769 NAT10Q9H0A0 1025 aaKnown RBP22.03■■□□□ 1.12
CACNA1A-247ENST00000637769 DDX49Q9Y6V7 483 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-247ENST00000637769 CENPQQ7L2Z9 268 aaPredicted RBP22.02■■□□□ 1.12
CACNA1A-247ENST00000637769 MAP7D2Q96T17 732 aa22.02■■□□□ 1.12
CACNA1A-247ENST00000637769 ZKSCAN1P17029 563 aaPredicted RBP22.02■■□□□ 1.12
CACNA1A-247ENST00000637769 GTF2E1P29083 439 aaPredicted RBP22.02■■□□□ 1.12
CACNA1A-247ENST00000637769 HOMER1Q86YM7 354 aa22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 PCMTD1Q96MG8 357 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 UACAQ9BZF9 1416 aa22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 PATL2C9JE40 543 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 ERCC4Q92889 916 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-247ENST00000637769 CNKSR2Q8WXI2 1034 aa22■■□□□ 1.11
CACNA1A-247ENST00000637769 RNF20Q5VTR2 975 aa22■■□□□ 1.11
CACNA1A-247ENST00000637769 CT47A1Q5JQC4 288 aaPredicted RBP21.99■■□□□ 1.11
CACNA1A-247ENST00000637769 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
CACNA1A-247ENST00000637769 CCDC43Q96MW1 224 aaKnown RBP21.99■■□□□ 1.11
CACNA1A-247ENST00000637769 CTDP1Q9Y5B0 961 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-247ENST00000637769 NLRP13Q86W25 1043 aa21.97■■□□□ 1.11
CACNA1A-247ENST00000637769 DHX8Q14562 1220 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-247ENST00000637769 GSE1Q14687 1217 aa21.96■■□□□ 1.11
CACNA1A-247ENST00000637769 FMN1Q68DA7 1419 aa21.96■■□□□ 1.11
CACNA1A-247ENST00000637769 CGNL1Q0VF96 1302 aa21.95■■□□□ 1.11
CACNA1A-247ENST00000637769 DIAPH3Q9NSV4 1193 aa21.95■■□□□ 1.1
CACNA1A-247ENST00000637769 KIF15Q9NS87 1388 aa21.95■■□□□ 1.1
CACNA1A-247ENST00000637769 NEXNQ0ZGT2 675 aa21.94■■□□□ 1.1
CACNA1A-247ENST00000637769 TRDNQ13061 729 aa21.94■■□□□ 1.1
CACNA1A-247ENST00000637769 SLC4A10Q6U841 1118 aa21.94■■□□□ 1.1
CACNA1A-247ENST00000637769 EPS15P42566 896 aa21.94■■□□□ 1.1
CACNA1A-247ENST00000637769 FAM161AQ3B820 660 aa21.94■■□□□ 1.1
CACNA1A-247ENST00000637769 MCTP1Q6DN14 999 aa21.93■■□□□ 1.1
CACNA1A-247ENST00000637769 CAGE1Q8TC20 777 aa21.93■■□□□ 1.1
CACNA1A-247ENST00000637769 CCDC66A2RUB6 948 aa21.93■■□□□ 1.1
CACNA1A-247ENST00000637769 NGEFQ8N5V2 710 aa21.93■■□□□ 1.1
CACNA1A-247ENST00000637769 CCP110O43303 1012 aa21.93■■□□□ 1.1
CACNA1A-247ENST00000637769 ANKRD30AQ9BXX3 1397 aa21.93■■□□□ 1.1
CACNA1A-247ENST00000637769 CPLX1O14810 134 aa21.92■■□□□ 1.1
CACNA1A-247ENST00000637769 ZNF592Q92610 1267 aa21.92■■□□□ 1.1
CACNA1A-247ENST00000637769 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
CACNA1A-247ENST00000637769 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.91■■□□□ 1.17e-11■■■■■ 260.8
CACNA1A-247ENST00000637769 SIN3AQ96ST3 1273 aa21.91■■□□□ 1.1
CACNA1A-247ENST00000637769 ERICH2A1L162 156 aa21.9■■□□□ 1.1
CACNA1A-247ENST00000637769 SAFBQ15424 915 aaKnown RBP eCLIP21.9■■□□□ 1.1
CACNA1A-247ENST00000637769 R3HCC1Q9Y3T6 440 aaKnown RBP21.89■■□□□ 1.1
CACNA1A-247ENST00000637769 H0YHG0 523 aa21.89■■□□□ 1.1
CACNA1A-247ENST00000637769 SASS6Q6UVJ0 657 aa21.89■■□□□ 1.1
CACNA1A-247ENST00000637769 MNS1Q8NEH6 495 aa21.88■■□□□ 1.09
CACNA1A-247ENST00000637769 AMPHP49418 695 aa21.88■■□□□ 1.09
CACNA1A-247ENST00000637769 SAFB2Q14151 953 aaKnown RBP eCLIP21.88■■□□□ 1.09
CACNA1A-247ENST00000637769 BRMS1Q9HCU9 246 aa21.88■■□□□ 1.09
CACNA1A-247ENST00000637769 CCDC18Q5T9S5 1454 aa21.87■■□□□ 1.09
CACNA1A-247ENST00000637769 AAMPQ13685 434 aa21.87■■□□□ 1.09
CACNA1A-247ENST00000637769 STK26Q9P289 416 aa21.87■■□□□ 1.09
CACNA1A-247ENST00000637769 NUCB2P80303 420 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms