RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
CHD2-228ENST00000637613 PROX2Q3B8N5 592 aa8.35□□□□□ -1.07
CHD2-228ENST00000637613 V9GY48 417 aaPredicted RBP8.34□□□□□ -1.07
CHD2-228ENST00000637613 BCANQ96GW7 911 aa8.33□□□□□ -1.08
CHD2-228ENST00000637613 EVI5O60447 810 aa8.32□□□□□ -1.08
CHD2-228ENST00000637613 TSR3Q9UJK0 312 aaKnown RBP8.31□□□□□ -1.08
CHD2-228ENST00000637613 DCAF8L2P0C7V8 631 aa8.3□□□□□ -1.08
CHD2-228ENST00000637613 COL9A1P20849 921 aa8.3□□□□□ -1.08
CHD2-228ENST00000637613 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
CHD2-228ENST00000637613 ECM2O94769 699 aaPredicted RBP8.29□□□□□ -1.08
CHD2-228ENST00000637613 BBXQ8WY36 941 aaPredicted RBP8.29□□□□□ -1.08
CHD2-228ENST00000637613 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
CHD2-228ENST00000637613 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
CHD2-228ENST00000637613 PDZRN3Q9UPQ7 1066 aa8.28□□□□□ -1.08
CHD2-228ENST00000637613 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
CHD2-228ENST00000637613 HPS5Q9UPZ3 1129 aa8.27□□□□□ -1.09
CHD2-228ENST00000637613 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.26□□□□□ -1.09
CHD2-228ENST00000637613 RGL2O15211 777 aa8.25□□□□□ -1.09
CHD2-228ENST00000637613 FAM98CQ17RN3 349 aaKnown RBP8.25□□□□□ -1.09
CHD2-228ENST00000637613 TJAP1Q5JTD0 557 aa8.25□□□□□ -1.09
CHD2-228ENST00000637613 LRCH3Q96II8 777 aa8.25□□□□□ -1.09
CHD2-228ENST00000637613 SEPT9Q9UHD8 586 aaPredicted RBP8.25□□□□□ -1.09
CHD2-228ENST00000637613 KDM2AQ9Y2K7 1162 aa8.25□□□□□ -1.09
CHD2-228ENST00000637613 PCDHGA10Q9Y5H3 936 aa8.25□□□□□ -1.09
CHD2-228ENST00000637613 PPP1R18Q6NYC8 613 aa8.24□□□□□ -1.09
CHD2-228ENST00000637613 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
CHD2-228ENST00000637613 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.23□□□□□ -1.09
CHD2-228ENST00000637613 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
CHD2-228ENST00000637613 TYW1BQ6NUM6 668 aa8.2□□□□□ -1.1
CHD2-228ENST00000637613 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.2□□□□□ -1.1
CHD2-228ENST00000637613 TRIM6-TRIM34B2RNG4 842 aa8.18□□□□□ -1.1
CHD2-228ENST00000637613 MAP3K9P80192 1104 aa8.18□□□□□ -1.1
CHD2-228ENST00000637613 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
CHD2-228ENST00000637613 IL21Q9HBE4 155 aa8.18□□□□□ -1.1
CHD2-228ENST00000637613 PHF14O94880 888 aa8.17□□□□□ -1.1
CHD2-228ENST00000637613 PPP4CP60510 307 aa8.17□□□□□ -1.1
CHD2-228ENST00000637613 TREML4Q6UXN2 200 aa8.17□□□□□ -1.1
CHD2-228ENST00000637613 PAXIP1Q6ZW49 1069 aaPredicted RBP8.17□□□□□ -1.1
CHD2-228ENST00000637613 MTRQ99707 1265 aa8.17□□□□□ -1.1
CHD2-228ENST00000637613 NCKAP5LQ9HCH0 1330 aa8.15□□□□□ -1.1
CHD2-228ENST00000637613 PDE4AP27815 886 aa8.15□□□□□ -1.1
CHD2-228ENST00000637613 POTECB2RU33 542 aa8.14□□□□□ -1.11
CHD2-228ENST00000637613 C6orf132Q5T0Z8 1188 aa8.14□□□□□ -1.11
CHD2-228ENST00000637613 MYT1Q01538 1121 aa8.13□□□□□ -1.11
CHD2-228ENST00000637613 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
CHD2-228ENST00000637613 DGAT1O75907 488 aa8.11□□□□□ -1.11
CHD2-228ENST00000637613 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
CHD2-228ENST00000637613 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
CHD2-228ENST00000637613 SPRYD3Q8NCJ5 442 aa8.11□□□□□ -1.11
CHD2-228ENST00000637613 CFAP44Q96MT7 982 aa8.11□□□□□ -1.11
CHD2-228ENST00000637613 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
CHD2-228ENST00000637613 GGCXP38435 758 aa8.1□□□□□ -1.11
CHD2-228ENST00000637613 ZNF516Q92618 1163 aa8.1□□□□□ -1.11
CHD2-228ENST00000637613 TSHZ2Q9NRE2 1034 aa8.1□□□□□ -1.11
CHD2-228ENST00000637613 EPAS1Q99814 870 aa8.09□□□□□ -1.11
CHD2-228ENST00000637613 STK17AQ9UEE5 414 aa8.09□□□□□ -1.11
CHD2-228ENST00000637613 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
CHD2-228ENST00000637613 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
CHD2-228ENST00000637613 EMILIN3Q9NT22 766 aa8.08□□□□□ -1.12
CHD2-228ENST00000637613 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
CHD2-228ENST00000637613 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
CHD2-228ENST00000637613 PACS2Q86VP3 889 aa8.07□□□□□ -1.12
CHD2-228ENST00000637613 KRTAP4-6Q9BYQ5 205 aa8.07□□□□□ -1.12
CHD2-228ENST00000637613 RYDENQ9NUL5 291 aaKnown RBP8.07□□□□□ -1.12
CHD2-228ENST00000637613 SAMD7Q7Z3H4 446 aa8.06□□□□□ -1.12
CHD2-228ENST00000637613 NKX2-3Q8TAU0 364 aa8.05□□□□□ -1.12
CHD2-228ENST00000637613 LARP6Q9BRS8 491 aaKnown RBP8.05□□□□□ -1.12
CHD2-228ENST00000637613 PRR20EP86478 221 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 PRR20CP86479 221 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 PRR20DP86480 221 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 PRR20BP86481 221 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 PRR20AP86496 221 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 MFSD10Q14728 455 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 TSKSQ9UJT2 592 aa8.04□□□□□ -1.12
CHD2-228ENST00000637613 CHGAP10645 457 aaKnown RBP8.02□□□□□ -1.13
CHD2-228ENST00000637613 SLC19A1P41440 591 aa8.01□□□□□ -1.13
CHD2-228ENST00000637613 APLP1P51693 650 aa8□□□□□ -1.13
CHD2-228ENST00000637613 NKX1-1Q15270 411 aaPredicted RBP8□□□□□ -1.13
CHD2-228ENST00000637613 RBM33Q96EV2 1170 aaKnown RBP8□□□□□ -1.13
CHD2-228ENST00000637613 WFS1O76024 890 aa7.99□□□□□ -1.13
CHD2-228ENST00000637613 WIPF1O43516 503 aa7.98□□□□□ -1.13
CHD2-228ENST00000637613 INSM1Q01101 510 aaPredicted RBP7.98□□□□□ -1.13
CHD2-228ENST00000637613 ZNF598Q86UK7 904 aaKnown RBP7.98□□□□□ -1.13
CHD2-228ENST00000637613 EMID1Q96A84 441 aaPredicted RBP7.98□□□□□ -1.13
CHD2-228ENST00000637613 FAM187AA6NFU0 413 aa7.97□□□□□ -1.13
CHD2-228ENST00000637613 SPRYD7Q5W111 196 aa7.97□□□□□ -1.13
CHD2-228ENST00000637613 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
CHD2-228ENST00000637613 SMAPO00193 183 aa7.96□□□□□ -1.14
CHD2-228ENST00000637613 RNF223E7ERA6 249 aa7.94□□□□□ -1.14
CHD2-228ENST00000637613 ST8SIA5O15466 376 aa7.94□□□□□ -1.14
CHD2-228ENST00000637613 NECTIN2Q92692 538 aa7.94□□□□□ -1.14
CHD2-228ENST00000637613 ZPR1O75312 459 aa7.93□□□□□ -1.14
CHD2-228ENST00000637613 COPS2P61201 443 aa7.93□□□□□ -1.14
CHD2-228ENST00000637613 EN1Q05925 392 aaPredicted RBP7.93□□□□□ -1.14
CHD2-228ENST00000637613 CDCA7LQ96GN5 454 aa7.93□□□□□ -1.14
CHD2-228ENST00000637613 GDF9O60383 454 aa7.92□□□□□ -1.14
CHD2-228ENST00000637613 RNF40O75150 1001 aa7.92□□□□□ -1.14
CHD2-228ENST00000637613 HDGFP51858 240 aaKnown RBP7.92□□□□□ -1.14
CHD2-228ENST00000637613 NFX1Q12986 1120 aaKnown RBP7.92□□□□□ -1.14
CHD2-228ENST00000637613 TATDN2Q93075 761 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms