RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 EN1Q05925 392 aaPredicted RBP8.4□□□□□ -1.06
SRP54-214ENST00000630962 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.06
SRP54-214ENST00000630962 MAP3K7O43318 606 aa8.39□□□□□ -1.07
SRP54-214ENST00000630962 ONECUT3O60422 494 aaPredicted RBP8.38□□□□□ -1.07
SRP54-214ENST00000630962 C6orf132Q5T0Z8 1188 aa8.38□□□□□ -1.07
SRP54-214ENST00000630962 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
SRP54-214ENST00000630962 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
SRP54-214ENST00000630962 OSBPP22059 807 aa8.36□□□□□ -1.07
SRP54-214ENST00000630962 POTEEQ6S8J3 1075 aa8.36□□□□□ -1.07
SRP54-214ENST00000630962 AXIN2Q9Y2T1 843 aa8.36□□□□□ -1.07
SRP54-214ENST00000630962 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
SRP54-214ENST00000630962 PSEN2P49810 448 aa8.35□□□□□ -1.07
SRP54-214ENST00000630962 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
SRP54-214ENST00000630962 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
SRP54-214ENST00000630962 SEMA3EO15041 775 aa8.34□□□□□ -1.07
SRP54-214ENST00000630962 SPNS2Q8IVW8 549 aa8.33□□□□□ -1.08
SRP54-214ENST00000630962 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
SRP54-214ENST00000630962 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
SRP54-214ENST00000630962 RBM27Q9P2N5 1060 aaKnown RBP8.32□□□□□ -1.08
SRP54-214ENST00000630962 VPS9D1Q9Y2B5 631 aa8.32□□□□□ -1.08
SRP54-214ENST00000630962 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
SRP54-214ENST00000630962 DMRTA1Q5VZB9 504 aa8.31□□□□□ -1.08
SRP54-214ENST00000630962 RABGEF1Q9UJ41 708 aa8.31□□□□□ -1.08
SRP54-214ENST00000630962 PACS2Q86VP3 889 aa8.3□□□□□ -1.08
SRP54-214ENST00000630962 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
SRP54-214ENST00000630962 TRIM6-TRIM34B2RNG4 842 aa8.28□□□□□ -1.08
SRP54-214ENST00000630962 HRO43593 1189 aa8.28□□□□□ -1.08
SRP54-214ENST00000630962 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
SRP54-214ENST00000630962 FCHSD2O94868 740 aa8.27□□□□□ -1.09
SRP54-214ENST00000630962 COL9A1P20849 921 aa8.27□□□□□ -1.09
SRP54-214ENST00000630962 PRSS12P56730 875 aa8.27□□□□□ -1.09
SRP54-214ENST00000630962 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
SRP54-214ENST00000630962 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
SRP54-214ENST00000630962 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
SRP54-214ENST00000630962 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
SRP54-214ENST00000630962 MRPL50Q8N5N7 158 aaKnown RBP8.26□□□□□ -1.09
SRP54-214ENST00000630962 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
SRP54-214ENST00000630962 BHMG1C9JSJ3 638 aaPredicted RBP8.25□□□□□ -1.09
SRP54-214ENST00000630962 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
SRP54-214ENST00000630962 NBPF26B4DH59 902 aa8.24□□□□□ -1.09
SRP54-214ENST00000630962 RNF166Q96A37 237 aaPredicted RBP8.24□□□□□ -1.09
SRP54-214ENST00000630962 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
SRP54-214ENST00000630962 PTGDRQ13258 359 aa8.23□□□□□ -1.09
SRP54-214ENST00000630962 HIC1Q14526 733 aa8.23□□□□□ -1.09
SRP54-214ENST00000630962 KIAA1468Q9P260 1216 aa8.23□□□□□ -1.09
SRP54-214ENST00000630962 PROX2Q3B8N5 592 aa8.22□□□□□ -1.09
SRP54-214ENST00000630962 HDGFP51858 240 aaKnown RBP8.21□□□□□ -1.1
SRP54-214ENST00000630962 GPIHBP1Q8IV16 184 aa8.21□□□□□ -1.1
SRP54-214ENST00000630962 NPDC1Q9NQX5 325 aaPredicted RBP8.21□□□□□ -1.1
SRP54-214ENST00000630962 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
SRP54-214ENST00000630962 TTC13Q8NBP0 860 aa8.2□□□□□ -1.1
SRP54-214ENST00000630962 BCANQ96GW7 911 aa8.2□□□□□ -1.1
SRP54-214ENST00000630962 CDHR5Q9HBB8 845 aa8.2□□□□□ -1.1
SRP54-214ENST00000630962 SLC4A3P48751 1232 aa8.19□□□□□ -1.1
SRP54-214ENST00000630962 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
SRP54-214ENST00000630962 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
SRP54-214ENST00000630962 NECTIN2Q92692 538 aa8.19□□□□□ -1.1
SRP54-214ENST00000630962 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
SRP54-214ENST00000630962 HCSTQ9UBK5 93 aa8.18□□□□□ -1.1
SRP54-214ENST00000630962 GNPATO15228 680 aa8.17□□□□□ -1.1
SRP54-214ENST00000630962 OATP04181 439 aa8.17□□□□□ -1.1
SRP54-214ENST00000630962 PADI6Q6TGC4 694 aa8.17□□□□□ -1.1
SRP54-214ENST00000630962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
SRP54-214ENST00000630962 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
SRP54-214ENST00000630962 TATDN2Q93075 761 aa8.17□□□□□ -1.1
SRP54-214ENST00000630962 WNT2BQ93097 391 aa8.17□□□□□ -1.1
SRP54-214ENST00000630962 PNMA3Q9UL41 463 aa8.16□□□□□ -1.1
SRP54-214ENST00000630962 NYAP1Q6ZVC0 841 aa8.15□□□□□ -1.1
SRP54-214ENST00000630962 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
SRP54-214ENST00000630962 NUDT18Q6ZVK8 323 aa8.14□□□□□ -1.11
SRP54-214ENST00000630962 KCTD12Q96CX2 325 aaKnown RBP8.14□□□□□ -1.11
SRP54-214ENST00000630962 LMOD2Q6P5Q4 547 aa8.13□□□□□ -1.11
SRP54-214ENST00000630962 LRCH3Q96II8 777 aa8.13□□□□□ -1.11
SRP54-214ENST00000630962 SOWAHBA6NEL2 793 aa8.12□□□□□ -1.11
SRP54-214ENST00000630962 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
SRP54-214ENST00000630962 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
SRP54-214ENST00000630962 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
SRP54-214ENST00000630962 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
SRP54-214ENST00000630962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
SRP54-214ENST00000630962 GPR37O15354 613 aa8.1□□□□□ -1.11
SRP54-214ENST00000630962 DNAJB2P25686 324 aa8.1□□□□□ -1.11
SRP54-214ENST00000630962 EYA1Q99502 592 aa8.1□□□□□ -1.11
SRP54-214ENST00000630962 ADGRG1Q9Y653 693 aa8.1□□□□□ -1.11
SRP54-214ENST00000630962 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
SRP54-214ENST00000630962 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
SRP54-214ENST00000630962 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
SRP54-214ENST00000630962 MAP2K5Q13163 448 aa8.08□□□□□ -1.12
SRP54-214ENST00000630962 TSR3Q9UJK0 312 aaKnown RBP8.08□□□□□ -1.12
SRP54-214ENST00000630962 SMAPO00193 183 aa8.07□□□□□ -1.12
SRP54-214ENST00000630962 PRR14Q9BWN1 585 aa8.07□□□□□ -1.12
SRP54-214ENST00000630962 PPP4CP60510 307 aa8.06□□□□□ -1.12
SRP54-214ENST00000630962 PTPN5P54829 565 aa8.05□□□□□ -1.12
SRP54-214ENST00000630962 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
SRP54-214ENST00000630962 METTL3Q86U44 580 aaKnown RBP8.05□□□□□ -1.12
SRP54-214ENST00000630962 PXYLP1Q8TE99 480 aa8.05□□□□□ -1.12
SRP54-214ENST00000630962 RCCD1A6NED2 376 aa8.04□□□□□ -1.12
SRP54-214ENST00000630962 KRI1Q8N9T8 703 aaKnown RBP8.04□□□□□ -1.12
SRP54-214ENST00000630962 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
SRP54-214ENST00000630962 HPS5Q9UPZ3 1129 aa8.04□□□□□ -1.12
SRP54-214ENST00000630962 IRF6O14896 467 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 861 ms