RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-222	ENST00000630804	RSPH6A	Q9H0K4	717 aa		10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	KIF3A	Q9Y496	699 aa		10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	IPO7	O95373	1038 aa	Known RBP	10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	CDR1	P51861	262 aa		10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	RUFY1	Q96T51	708 aa		10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	SPAG9	O60271	1321 aa	Known RBP	10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	TRIM6-TRIM34	B2RNG4	842 aa		10.18	□□□□□ -0.78
SPTAN1-222	ENST00000630804	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.17	□□□□□ -0.78
SPTAN1-222	ENST00000630804	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.17	□□□□□ -0.78	2e-7	■■■■■ 86.5
SPTAN1-222	ENST00000630804	TCEAL9	Q9UHQ7	104 aa		10.17	□□□□□ -0.78
SPTAN1-222	ENST00000630804	SOGA1	O94964	1423 aa		10.17	□□□□□ -0.78
SPTAN1-222	ENST00000630804	CHMP3	Q9Y3E7	222 aa		10.17	□□□□□ -0.78
SPTAN1-222	ENST00000630804	AK7	Q96M32	723 aa		10.16	□□□□□ -0.78
SPTAN1-222	ENST00000630804	KIF16B	Q96L93	1317 aa		10.16	□□□□□ -0.78
SPTAN1-222	ENST00000630804	ZNF592	Q92610	1267 aa		10.16	□□□□□ -0.78
SPTAN1-222	ENST00000630804	ANKRD30A	Q9BXX3	1397 aa		10.16	□□□□□ -0.78
SPTAN1-222	ENST00000630804	TERF2IP	Q9NYB0	399 aa		10.15	□□□□□ -0.78
SPTAN1-222	ENST00000630804	BECN2	A8MW95	431 aa		10.15	□□□□□ -0.78
SPTAN1-222	ENST00000630804	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.15	□□□□□ -0.78
SPTAN1-222	ENST00000630804	KTN1	Q86UP2	1357 aa	Known RBP	10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	TCERG1	O14776	1098 aa	Known RBP	10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	CCER2	I3L3R5	266 aa		10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	RDX	P35241	583 aa	Known RBP	10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	PKD2	Q13563	968 aa		10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804		H3BQV1	296 aa		10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	IFFO2	Q5TF58	517 aa		10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	TOMM22	Q9NS69	142 aa		10.14	□□□□□ -0.79
SPTAN1-222	ENST00000630804	STK11IP	Q8N1F8	1099 aa		10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	SIN3A	Q96ST3	1273 aa		10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ODF2	Q5BJF6	829 aa		10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	DCTN1	Q14203	1278 aa		10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	SETD5	Q9C0A6	1442 aa		10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ROCK2	O75116	1388 aa	Known RBP	10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	STK31	Q9BXU1	1019 aa		10.13	□□□□□ -0.79
SPTAN1-222	ENST00000630804	FRAT2	O75474	233 aa	Predicted RBP	10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	NOL8	Q76FK4	1167 aa	Known RBP	10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804		H0YHG0	523 aa		10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	MFAP1	P55081	439 aa	Known RBP	10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	PLCD4	Q9BRC7	762 aa		10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	NUP155	O75694	1391 aa		10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	RWDD1	Q9H446	243 aa	Predicted RBP	10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	WASHC2C	Q9Y4E1	1318 aa		10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ST18	O60284	1047 aa		10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	NGDN	Q8NEJ9	315 aa	Known RBP	10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ANKRD20A12P	Q8NF67	263 aa		10.12	□□□□□ -0.79
SPTAN1-222	ENST00000630804	AKAP17A	Q02040	695 aa	Known RBP	10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	HOMER1	Q86YM7	354 aa		10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ITPRIP	Q8IWB1	547 aa		10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	KIF3B	O15066	747 aa		10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ACBD3	Q9H3P7	528 aa		10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	CCDC18	Q5T9S5	1454 aa		10.11	□□□□□ -0.79
SPTAN1-222	ENST00000630804	FOXD4L1	Q9NU39	408 aa		10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	LMOD3	Q0VAK6	560 aa		10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	FAM184A	Q8NB25	1140 aa		10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	HSP90B2P	Q58FF3	399 aa		10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	DDX11L8	A8MPP1	907 aa		10.1	□□□□□ -0.79
SPTAN1-222	ENST00000630804	CECR2	Q9BXF3	1484 aa		10.09	□□□□□ -0.79
SPTAN1-222	ENST00000630804	CWC22	Q9HCG8	908 aa	Known RBP	10.09	□□□□□ -0.79
SPTAN1-222	ENST00000630804	RALBP1	Q15311	655 aa		10.09	□□□□□ -0.79
SPTAN1-222	ENST00000630804	ZRSR2	Q15696	482 aa	Known RBP	10.09	□□□□□ -0.79
SPTAN1-222	ENST00000630804	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.09	□□□□□ -0.79
SPTAN1-222	ENST00000630804	NAP1L1	P55209	391 aa	Known RBP	10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CCDC47	Q96A33	483 aa	Known RBP	10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CWC15	Q9P013	229 aa	Known RBP	10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	ATP6V1D	Q9Y5K8	247 aa		10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	VPS8	Q8N3P4	1428 aa		10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	GTF2E1	P29083	439 aa	Predicted RBP	10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	AMPH	P49418	695 aa		10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	FAM13B	Q9NYF5	915 aa		10.08	□□□□□ -0.8
SPTAN1-222	ENST00000630804	PMFBP1	Q8TBY8	1022 aa		10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CHMP4C	Q96CF2	233 aa		10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	TDRD9	Q8NDG6	1382 aa	Known RBP	10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CCDC173	Q0VFZ6	552 aa		10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	NEXN	Q0ZGT2	675 aa		10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.07	□□□□□ -0.8
SPTAN1-222	ENST00000630804	HSP90AB3P	Q58FF7	597 aa		10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	HOOK1	Q9UJC3	728 aa	Known RBP	10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	UACA	Q9BZF9	1416 aa		10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	PRKCSH	P14314	528 aa	Predicted RBP	10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	HSP90AB2P	Q58FF8	381 aa		10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	ZFYVE27	Q5T4F4	411 aa		10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	ABCC8	Q09428	1581 aa		10.06	□□□□□ -0.8
SPTAN1-222	ENST00000630804	DDX49	Q9Y6V7	483 aa	Known RBP	10.05	□□□□□ -0.8
SPTAN1-222	ENST00000630804	MCTP1	Q6DN14	999 aa		10.05	□□□□□ -0.8
SPTAN1-222	ENST00000630804	MPHOSPH9	Q99550	1183 aa		10.05	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CCDC43	Q96MW1	224 aa	Known RBP	10.05	□□□□□ -0.8
SPTAN1-222	ENST00000630804	MYO6	Q9UM54	1294 aa		10.05	□□□□□ -0.8
SPTAN1-222	ENST00000630804	CCDC88B	A6NC98	1476 aa		10.05	□□□□□ -0.8
SPTAN1-222	ENST00000630804	MEX3C	Q5U5Q3	659 aa	Known RBP	10.04	□□□□□ -0.8
SPTAN1-222	ENST00000630804	SYNE3	Q6ZMZ3	975 aa		10.04	□□□□□ -0.8
SPTAN1-222	ENST00000630804	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.04	□□□□□ -0.8
SPTAN1-222	ENST00000630804	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.04	□□□□□ -0.8
SPTAN1-222	ENST00000630804	PAF1	Q8N7H5	531 aa		10.04	□□□□□ -0.8
SPTAN1-222	ENST00000630804	JPH4	Q96JJ6	628 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms