RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 RALBP1Q15311 655 aa11□□□□□ -0.65
GABRB3-216ENST00000628124 RDXP35241 583 aaKnown RBP11□□□□□ -0.65
GABRB3-216ENST00000628124 AK7Q96M32 723 aa11□□□□□ -0.65
GABRB3-216ENST00000628124 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
GABRB3-216ENST00000628124 WWC1Q8IX03 1113 aa11□□□□□ -0.65
GABRB3-216ENST00000628124 NOM1Q5C9Z4 860 aaKnown RBP10.99□□□□□ -0.65
GABRB3-216ENST00000628124 ANO8Q9HCE9 1232 aaPredicted RBP10.99□□□□□ -0.65
GABRB3-216ENST00000628124 SMC4Q9NTJ3 1288 aa10.99□□□□□ -0.65
GABRB3-216ENST00000628124 TRIM29Q14134 588 aa10.99□□□□□ -0.65
GABRB3-216ENST00000628124 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
GABRB3-216ENST00000628124 RUFY1Q96T51 708 aa10.99□□□□□ -0.65
GABRB3-216ENST00000628124 RSPH6AQ9H0K4 717 aa10.99□□□□□ -0.65
GABRB3-216ENST00000628124 SCRIBQ14160 1630 aa10.99□□□□□ -0.65
GABRB3-216ENST00000628124 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
GABRB3-216ENST00000628124 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.65
GABRB3-216ENST00000628124 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
GABRB3-216ENST00000628124 CCDC191Q8NCU4 936 aa10.98□□□□□ -0.65
GABRB3-216ENST00000628124 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
GABRB3-216ENST00000628124 ZNF771Q7L3S4 317 aaPredicted RBP10.97□□□□□ -0.65
GABRB3-216ENST00000628124 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
GABRB3-216ENST00000628124 ODF2Q5BJF6 829 aa10.97□□□□□ -0.65
GABRB3-216ENST00000628124 CCDC43Q96MW1 224 aaKnown RBP10.97□□□□□ -0.65
GABRB3-216ENST00000628124 RBM19Q9Y4C8 960 aaKnown RBP10.96□□□□□ -0.65
GABRB3-216ENST00000628124 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.65
GABRB3-216ENST00000628124 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.66
GABRB3-216ENST00000628124 CT47A1Q5JQC4 288 aaPredicted RBP10.96□□□□□ -0.66
GABRB3-216ENST00000628124 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.66
GABRB3-216ENST00000628124 ARGLU1Q9NWB6 273 aaPredicted RBP10.96□□□□□ -0.66
GABRB3-216ENST00000628124 R3HCC1Q9Y3T6 440 aaKnown RBP10.96□□□□□ -0.66
GABRB3-216ENST00000628124 MLECQ14165 292 aa10.95□□□□□ -0.66
GABRB3-216ENST00000628124 SLC4A10Q6U841 1118 aa10.95□□□□□ -0.66
GABRB3-216ENST00000628124 RUFY2Q8WXA3 655 aa10.95□□□□□ -0.66
GABRB3-216ENST00000628124 MYO6Q9UM54 1294 aa10.95□□□□□ -0.66
GABRB3-216ENST00000628124 NOL8Q76FK4 1167 aaKnown RBP10.94□□□□□ -0.66
GABRB3-216ENST00000628124 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
GABRB3-216ENST00000628124 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
GABRB3-216ENST00000628124 STK26Q9P289 416 aa10.94□□□□□ -0.66
GABRB3-216ENST00000628124 DDX49Q9Y6V7 483 aaKnown RBP10.93□□□□□ -0.66
GABRB3-216ENST00000628124 HSP90B2PQ58FF3 399 aa10.93□□□□□ -0.66
GABRB3-216ENST00000628124 CWC22Q9HCG8 908 aaKnown RBP10.93□□□□□ -0.66
GABRB3-216ENST00000628124 ZRSR2Q15696 482 aaKnown RBP10.93□□□□□ -0.66
GABRB3-216ENST00000628124 HOMER1Q86YM7 354 aa10.93□□□□□ -0.66
GABRB3-216ENST00000628124 CENPJQ9HC77 1338 aaPredicted RBP10.92□□□□□ -0.66
GABRB3-216ENST00000628124 PHLDB1Q86UU1 1377 aa10.92□□□□□ -0.66
GABRB3-216ENST00000628124 ZKSCAN1P17029 563 aaPredicted RBP10.92□□□□□ -0.66
GABRB3-216ENST00000628124 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
GABRB3-216ENST00000628124 CPLX1O14810 134 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 CEP162Q5TB80 1403 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 ERCC4Q92889 916 aaPredicted RBP10.91□□□□□ -0.66
GABRB3-216ENST00000628124 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 AMPHP49418 695 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 SIN3AQ96ST3 1273 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 MCTP1Q6DN14 999 aa10.91□□□□□ -0.66
GABRB3-216ENST00000628124 DIAPH3Q9NSV4 1193 aa10.9□□□□□ -0.66
GABRB3-216ENST00000628124 TRDNQ13061 729 aa10.9□□□□□ -0.66
GABRB3-216ENST00000628124 ZNF592Q92610 1267 aa10.9□□□□□ -0.66
GABRB3-216ENST00000628124 MAP7D2Q96T17 732 aa10.9□□□□□ -0.66
GABRB3-216ENST00000628124 DHX16O60231 1041 aaKnown RBP10.9□□□□□ -0.67
GABRB3-216ENST00000628124 NEXNQ0ZGT2 675 aa10.9□□□□□ -0.67
GABRB3-216ENST00000628124 NGDNQ8NEJ9 315 aaKnown RBP10.9□□□□□ -0.67
GABRB3-216ENST00000628124 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
GABRB3-216ENST00000628124 MNS1Q8NEH6 495 aa10.89□□□□□ -0.67
GABRB3-216ENST00000628124 GGT6Q6P531 493 aa10.89□□□□□ -0.67
GABRB3-216ENST00000628124 REC8O95072 547 aa10.89□□□□□ -0.67
GABRB3-216ENST00000628124 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
GABRB3-216ENST00000628124 ERICH2A1L162 156 aa10.88□□□□□ -0.67
GABRB3-216ENST00000628124 CWC15Q9P013 229 aaKnown RBP10.88□□□□□ -0.67
GABRB3-216ENST00000628124 OFD1O75665 1012 aa10.88□□□□□ -0.67
GABRB3-216ENST00000628124 SAFBQ15424 915 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-216ENST00000628124 NAP1L1P55209 391 aaKnown RBP10.88□□□□□ -0.67
GABRB3-216ENST00000628124 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
GABRB3-216ENST00000628124 ROCK2O75116 1388 aaKnown RBP10.87□□□□□ -0.67
GABRB3-216ENST00000628124 RAD21O60216 631 aa10.87□□□□□ -0.67
GABRB3-216ENST00000628124 HSP90AB2PQ58FF8 381 aa10.87□□□□□ -0.67
GABRB3-216ENST00000628124 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-216ENST00000628124 HSPA5P11021 654 aaKnown RBP10.87□□□□□ -0.67
GABRB3-216ENST00000628124 C1orf141Q5JVX7 400 aa10.87□□□□□ -0.67
GABRB3-216ENST00000628124 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-216ENST00000628124 CEP164Q9UPV0 1460 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 H0YHG0 523 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-216ENST00000628124 BICD2Q8TD16 824 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-216ENST00000628124 EPS15P42566 896 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 PAF1Q8N7H5 531 aa10.86□□□□□ -0.67
GABRB3-216ENST00000628124 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
GABRB3-216ENST00000628124 ZFYVE27Q5T4F4 411 aa10.85□□□□□ -0.67
GABRB3-216ENST00000628124 CCDC73Q6ZRK6 1079 aa10.85□□□□□ -0.67
GABRB3-216ENST00000628124 VPS37DQ86XT2 251 aa10.85□□□□□ -0.67
GABRB3-216ENST00000628124 BRMS1Q9HCU9 246 aa10.84□□□□□ -0.67
GABRB3-216ENST00000628124 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
GABRB3-216ENST00000628124 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
GABRB3-216ENST00000628124 NAT10Q9H0A0 1025 aaKnown RBP10.84□□□□□ -0.67
GABRB3-216ENST00000628124 APPP05067 770 aa10.84□□□□□ -0.67
GABRB3-216ENST00000628124 CENPQQ7L2Z9 268 aaPredicted RBP10.84□□□□□ -0.67
GABRB3-216ENST00000628124 MTERF4Q7Z6M4 381 aaKnown RBP10.84□□□□□ -0.67
GABRB3-216ENST00000628124 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms