RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PCDHGA10Q9Y5H3 936 aa10.41□□□□□ -0.74
VBP1-204ENST00000625964 PHF14O94880 888 aa10.39□□□□□ -0.75
VBP1-204ENST00000625964 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
VBP1-204ENST00000625964 KCNC4Q03721 635 aa10.38□□□□□ -0.75
VBP1-204ENST00000625964 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
VBP1-204ENST00000625964 Q6ZNB5 142 aa10.38□□□□□ -0.75
VBP1-204ENST00000625964 COL9A1P20849 921 aa10.37□□□□□ -0.75
VBP1-204ENST00000625964 BCAMP50895 628 aa10.37□□□□□ -0.75
VBP1-204ENST00000625964 LAPTM4AQ15012 233 aa10.37□□□□□ -0.75
VBP1-204ENST00000625964 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
VBP1-204ENST00000625964 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
VBP1-204ENST00000625964 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
VBP1-204ENST00000625964 EPAS1Q99814 870 aa10.33□□□□□ -0.76
VBP1-204ENST00000625964 GTPBP6O43824 516 aaPredicted RBP10.33□□□□□ -0.76
VBP1-204ENST00000625964 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
VBP1-204ENST00000625964 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
VBP1-204ENST00000625964 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
VBP1-204ENST00000625964 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
VBP1-204ENST00000625964 TRIM6-TRIM34B2RNG4 842 aa10.28□□□□□ -0.76
VBP1-204ENST00000625964 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.28□□□□□ -0.76
VBP1-204ENST00000625964 LRCH3Q96II8 777 aa10.27□□□□□ -0.77
VBP1-204ENST00000625964 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
VBP1-204ENST00000625964 HPS5Q9UPZ3 1129 aa10.24□□□□□ -0.77
VBP1-204ENST00000625964 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
VBP1-204ENST00000625964 TRAF7Q6Q0C0 670 aa10.22□□□□□ -0.77
VBP1-204ENST00000625964 GFRA3O60609 400 aa10.21□□□□□ -0.78
VBP1-204ENST00000625964 PACS2Q86VP3 889 aa10.2□□□□□ -0.78
VBP1-204ENST00000625964 PPP4CP60510 307 aa10.17□□□□□ -0.78
VBP1-204ENST00000625964 NRG2O14511 850 aaPredicted RBP10.16□□□□□ -0.78
VBP1-204ENST00000625964 RBM33Q96EV2 1170 aaKnown RBP10.16□□□□□ -0.78
VBP1-204ENST00000625964 DPYSL4O14531 572 aa10.15□□□□□ -0.78
VBP1-204ENST00000625964 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
VBP1-204ENST00000625964 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
VBP1-204ENST00000625964 V9GY48 417 aaPredicted RBP10.14□□□□□ -0.79
VBP1-204ENST00000625964 LCE2BO14633 110 aa10.13□□□□□ -0.79
VBP1-204ENST00000625964 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
VBP1-204ENST00000625964 PRKD2Q9BZL6 878 aa10.12□□□□□ -0.79
VBP1-204ENST00000625964 TSKSQ9UJT2 592 aa10.12□□□□□ -0.79
VBP1-204ENST00000625964 DDX12PQ92771 950 aa10.12□□□□□ -0.79
VBP1-204ENST00000625964 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
VBP1-204ENST00000625964 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
VBP1-204ENST00000625964 MAP3K7O43318 606 aa10.09□□□□□ -0.79
VBP1-204ENST00000625964 NBR1Q14596 966 aa10.08□□□□□ -0.8
VBP1-204ENST00000625964 PPP1R18Q6NYC8 613 aa10.07□□□□□ -0.8
VBP1-204ENST00000625964 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
VBP1-204ENST00000625964 MTRQ99707 1265 aa10.07□□□□□ -0.8
VBP1-204ENST00000625964 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
VBP1-204ENST00000625964 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
VBP1-204ENST00000625964 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
VBP1-204ENST00000625964 PRSS12P56730 875 aa10.06□□□□□ -0.8
VBP1-204ENST00000625964 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
VBP1-204ENST00000625964 PDIA6Q15084 440 aa10.05□□□□□ -0.8
VBP1-204ENST00000625964 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
VBP1-204ENST00000625964 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
VBP1-204ENST00000625964 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
VBP1-204ENST00000625964 TATDN2Q93075 761 aa10.02□□□□□ -0.8
VBP1-204ENST00000625964 GGCXP38435 758 aa10.02□□□□□ -0.81
VBP1-204ENST00000625964 SMAPO00193 183 aa10.01□□□□□ -0.81
VBP1-204ENST00000625964 ZNF787Q6DD87 383 aa10.01□□□□□ -0.81
VBP1-204ENST00000625964 DCAF8L2P0C7V8 631 aa10□□□□□ -0.81
VBP1-204ENST00000625964 PNMA3Q9UL41 463 aa10□□□□□ -0.81
VBP1-204ENST00000625964 FAM198AQ9UFP1 575 aa9.99□□□□□ -0.81
VBP1-204ENST00000625964 PDZRN3Q9UPQ7 1066 aa9.99□□□□□ -0.81
VBP1-204ENST00000625964 ZNF516Q92618 1163 aa9.98□□□□□ -0.81
VBP1-204ENST00000625964 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
VBP1-204ENST00000625964 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
VBP1-204ENST00000625964 APLP1P51693 650 aa9.96□□□□□ -0.82
VBP1-204ENST00000625964 RNF40O75150 1001 aa9.93□□□□□ -0.82
VBP1-204ENST00000625964 NUDT18Q6ZVK8 323 aa9.93□□□□□ -0.82
VBP1-204ENST00000625964 ARIH1Q9Y4X5 557 aaPredicted RBP9.93□□□□□ -0.82
VBP1-204ENST00000625964 SLF2Q8IX21 1173 aa9.92□□□□□ -0.82
VBP1-204ENST00000625964 C3orf80F5H4A9 247 aa9.92□□□□□ -0.82
VBP1-204ENST00000625964 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
VBP1-204ENST00000625964 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
VBP1-204ENST00000625964 PRR14Q9BWN1 585 aa9.91□□□□□ -0.82
VBP1-204ENST00000625964 ZNF775Q96BV0 537 aaPredicted RBP9.9□□□□□ -0.82
VBP1-204ENST00000625964 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
VBP1-204ENST00000625964 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
VBP1-204ENST00000625964 E2F4Q16254 413 aa9.88□□□□□ -0.83
VBP1-204ENST00000625964 ZPR1O75312 459 aa9.87□□□□□ -0.83
VBP1-204ENST00000625964 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
VBP1-204ENST00000625964 OSBPP22059 807 aa9.87□□□□□ -0.83
VBP1-204ENST00000625964 COPS2P61201 443 aa9.87□□□□□ -0.83
VBP1-204ENST00000625964 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
VBP1-204ENST00000625964 DGAT1O75907 488 aa9.85□□□□□ -0.83
VBP1-204ENST00000625964 BBXQ8WY36 941 aaPredicted RBP9.85□□□□□ -0.83
VBP1-204ENST00000625964 SLC19A1P41440 591 aa9.84□□□□□ -0.83
VBP1-204ENST00000625964 CDHR5Q9HBB8 845 aa9.84□□□□□ -0.83
VBP1-204ENST00000625964 PRR20EP86478 221 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 PRR20CP86479 221 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 PRR20DP86480 221 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 PRR20BP86481 221 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 PRR20AP86496 221 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 LOC100996750A0A140TA64 210 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 TRIM67Q6ZTA4 783 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 KRTAP4-6Q9BYQ5 205 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 PCDHB3Q9Y5E6 796 aa9.82□□□□□ -0.84
VBP1-204ENST00000625964 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
VBP1-204ENST00000625964 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms