RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 DOK7Q18PE1 504 aa5.89□□□□□ -1.47
SCARNA4-202ENST00000625402 TYW1BQ6NUM6 668 aa5.89□□□□□ -1.47
SCARNA4-202ENST00000625402 PARP9Q8IXQ6 854 aa5.89□□□□□ -1.47
SCARNA4-202ENST00000625402 TIMELESSQ9UNS1 1208 aa5.89□□□□□ -1.47
SCARNA4-202ENST00000625402 GTF3C3Q9Y5Q9 886 aa5.89□□□□□ -1.47
SCARNA4-202ENST00000625402 ZNF454Q8N9F8 522 aa5.88□□□□□ -1.47
SCARNA4-202ENST00000625402 ADAM33Q9BZ11 813 aa5.88□□□□□ -1.47
SCARNA4-202ENST00000625402 OTUD5Q96G74 571 aa5.87□□□□□ -1.47
SCARNA4-202ENST00000625402 PHOX2BQ99453 314 aa5.87□□□□□ -1.47
SCARNA4-202ENST00000625402 REPIN1Q9BWE0 567 aaKnown RBP5.87□□□□□ -1.47
SCARNA4-202ENST00000625402 FAM161AQ3B820 660 aa5.86□□□□□ -1.47
SCARNA4-202ENST00000625402 FBXW7Q969H0 707 aa5.86□□□□□ -1.47
SCARNA4-202ENST00000625402 FAM117AQ9C073 453 aa5.86□□□□□ -1.47
SCARNA4-202ENST00000625402 ZSWIM6Q9HCJ5 1215 aa5.86□□□□□ -1.47
SCARNA4-202ENST00000625402 C6orf132Q5T0Z8 1188 aa5.85□□□□□ -1.47
SCARNA4-202ENST00000625402 ZDHHC16Q969W1 377 aa5.85□□□□□ -1.47
SCARNA4-202ENST00000625402 LHX6Q9UPM6 363 aa5.85□□□□□ -1.47
SCARNA4-202ENST00000625402 PLEKHG3A1L390 1219 aa5.84□□□□□ -1.47
SCARNA4-202ENST00000625402 RIMBP2O15034 1052 aa5.84□□□□□ -1.47
SCARNA4-202ENST00000625402 PADI6Q6TGC4 694 aa5.84□□□□□ -1.47
SCARNA4-202ENST00000625402 IL27Q8NEV9 243 aa5.84□□□□□ -1.47
SCARNA4-202ENST00000625402 NLRP7Q8WX94 980 aa5.84□□□□□ -1.47
SCARNA4-202ENST00000625402 GIGYF2Q6Y7W6 1299 aaKnown RBP5.83□□□□□ -1.48
SCARNA4-202ENST00000625402 ZNF710Q8N1W2 664 aa5.83□□□□□ -1.48
SCARNA4-202ENST00000625402 TTC13Q8NBP0 860 aa5.83□□□□□ -1.48
SCARNA4-202ENST00000625402 MS4A1P11836 297 aa5.82□□□□□ -1.48
SCARNA4-202ENST00000625402 COL9A1P20849 921 aa5.82□□□□□ -1.48
SCARNA4-202ENST00000625402 TTLL12Q14166 644 aaPredicted RBP5.82□□□□□ -1.48
SCARNA4-202ENST00000625402 TMUB1Q9BVT8 246 aa5.82□□□□□ -1.48
SCARNA4-202ENST00000625402 FAM198AQ9UFP1 575 aa5.82□□□□□ -1.48
SCARNA4-202ENST00000625402 C3orf80F5H4A9 247 aa5.81□□□□□ -1.48
SCARNA4-202ENST00000625402 HOXB1P14653 301 aaPredicted RBP5.81□□□□□ -1.48
SCARNA4-202ENST00000625402 METTL3Q86U44 580 aaKnown RBP5.81□□□□□ -1.48
SCARNA4-202ENST00000625402 ADGRG1Q9Y653 693 aa5.81□□□□□ -1.48
SCARNA4-202ENST00000625402 MDM2Q00987 491 aaPredicted RBP5.8□□□□□ -1.48
SCARNA4-202ENST00000625402 BCL2L12Q9HB09 334 aa5.8□□□□□ -1.48
SCARNA4-202ENST00000625402 PPP4R3BQ5MIZ7 849 aa5.79□□□□□ -1.48
SCARNA4-202ENST00000625402 CERKQ8TCT0 537 aa5.79□□□□□ -1.48
SCARNA4-202ENST00000625402 PXYLP1Q8TE99 480 aa5.79□□□□□ -1.48
SCARNA4-202ENST00000625402 CDCA7LQ96GN5 454 aa5.79□□□□□ -1.48
SCARNA4-202ENST00000625402 RBM27Q9P2N5 1060 aaKnown RBP5.79□□□□□ -1.48
SCARNA4-202ENST00000625402 PRSS12P56730 875 aa5.78□□□□□ -1.48
SCARNA4-202ENST00000625402 TSKSQ9UJT2 592 aa5.78□□□□□ -1.48
SCARNA4-202ENST00000625402 PPP1R3GB7ZBB8 358 aa5.77□□□□□ -1.49
SCARNA4-202ENST00000625402 SNPHO15079 494 aa5.77□□□□□ -1.49
SCARNA4-202ENST00000625402 DDRGK1Q96HY6 314 aa5.77□□□□□ -1.49
SCARNA4-202ENST00000625402 GPCPD1Q9NPB8 672 aa5.77□□□□□ -1.49
SCARNA4-202ENST00000625402 CLCN1P35523 988 aa5.76□□□□□ -1.49
SCARNA4-202ENST00000625402 POTEEQ6S8J3 1075 aa5.76□□□□□ -1.49
SCARNA4-202ENST00000625402 PROX2Q3B8N5 592 aa5.75□□□□□ -1.49
SCARNA4-202ENST00000625402 KCNK17Q96T54 332 aa5.75□□□□□ -1.49
SCARNA4-202ENST00000625402 FAM217BQ9NTX9 383 aaPredicted RBP5.75□□□□□ -1.49
SCARNA4-202ENST00000625402 PSDA5PKW4 1024 aaPredicted RBP5.74□□□□□ -1.49
SCARNA4-202ENST00000625402 OATP04181 439 aa5.74□□□□□ -1.49
SCARNA4-202ENST00000625402 PTPREP23469 700 aa5.74□□□□□ -1.49
SCARNA4-202ENST00000625402 EYA1Q99502 592 aa5.74□□□□□ -1.49
SCARNA4-202ENST00000625402 TRIM6-TRIM34B2RNG4 842 aa5.73□□□□□ -1.49
SCARNA4-202ENST00000625402 SSTR3P32745 418 aaPredicted RBP5.73□□□□□ -1.49
SCARNA4-202ENST00000625402 PSEN2P49810 448 aa5.73□□□□□ -1.49
SCARNA4-202ENST00000625402 C14orf37Q86TY3 774 aa5.73□□□□□ -1.49
SCARNA4-202ENST00000625402 RCCD1A6NED2 376 aa5.72□□□□□ -1.49
SCARNA4-202ENST00000625402 SMAPO00193 183 aa5.72□□□□□ -1.49
SCARNA4-202ENST00000625402 ST18O60284 1047 aa5.72□□□□□ -1.49
SCARNA4-202ENST00000625402 VARS2Q5ST30 1063 aaKnown RBP5.72□□□□□ -1.49
SCARNA4-202ENST00000625402 SH3D19Q5HYK7 790 aa5.71□□□□□ -1.5
SCARNA4-202ENST00000625402 NUDT18Q6ZVK8 323 aa5.71□□□□□ -1.5
SCARNA4-202ENST00000625402 RBM46Q8TBY0 533 aaKnown RBP5.71□□□□□ -1.5
SCARNA4-202ENST00000625402 MARVELD3Q96A59 401 aa5.71□□□□□ -1.5
SCARNA4-202ENST00000625402 ZBED2Q9BTP6 218 aa5.71□□□□□ -1.5
SCARNA4-202ENST00000625402 BEGAINQ9BUH8 593 aa5.71□□□□□ -1.5
SCARNA4-202ENST00000625402 POTEB3A0JP26 581 aa5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 DMRTA1Q5VZB9 504 aa5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 POTEBQ6S5H4 581 aa5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 FAM163AQ96GL9 167 aaPredicted RBP5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 GOPCQ9HD26 462 aa5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 DAXXQ9UER7 740 aaPredicted RBP5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 PNMA3Q9UL41 463 aa5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 AXIN2Q9Y2T1 843 aa5.7□□□□□ -1.5
SCARNA4-202ENST00000625402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.69□□□□□ -1.5
SCARNA4-202ENST00000625402 NBPF26B4DH59 902 aa5.69□□□□□ -1.5
SCARNA4-202ENST00000625402 TATDN2Q93075 761 aa5.69□□□□□ -1.5
SCARNA4-202ENST00000625402 TMEM134Q9H6X4 195 aa5.69□□□□□ -1.5
SCARNA4-202ENST00000625402 ERBB3P21860 1342 aa5.69□□□□□ -1.5
SCARNA4-202ENST00000625402 ONECUT3O60422 494 aaPredicted RBP5.68□□□□□ -1.5
SCARNA4-202ENST00000625402 CD46P15529 392 aa5.68□□□□□ -1.5
SCARNA4-202ENST00000625402 EMP3P54852 163 aa5.68□□□□□ -1.5
SCARNA4-202ENST00000625402 MYSM1Q5VVJ2 828 aa5.68□□□□□ -1.5
SCARNA4-202ENST00000625402 FBXO31Q5XUX0 539 aaPredicted RBP5.68□□□□□ -1.5
SCARNA4-202ENST00000625402 DNAJB2P25686 324 aa5.67□□□□□ -1.5
SCARNA4-202ENST00000625402 KIAA1468Q9P260 1216 aa5.67□□□□□ -1.5
SCARNA4-202ENST00000625402 SEPT9Q9UHD8 586 aaPredicted RBP5.67□□□□□ -1.5
SCARNA4-202ENST00000625402 FAM205CA6NFA0 338 aa5.66□□□□□ -1.5
SCARNA4-202ENST00000625402 ARHGAP33O14559 1287 aa5.66□□□□□ -1.5
SCARNA4-202ENST00000625402 PACS2Q86VP3 889 aa5.66□□□□□ -1.5
SCARNA4-202ENST00000625402 PROCA1Q8NCQ7 364 aaPredicted RBP5.66□□□□□ -1.5
SCARNA4-202ENST00000625402 TBC1D2Q9BYX2 928 aa5.66□□□□□ -1.5
SCARNA4-202ENST00000625402 DDX11L8A8MPP1 907 aa5.65□□□□□ -1.5
SCARNA4-202ENST00000625402 PCMTD1Q96MG8 357 aaPredicted RBP5.65□□□□□ -1.5
SCARNA4-202ENST00000625402 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms