RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
SEC23A-215ENST00000625395 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
SEC23A-215ENST00000625395 EN1Q05925 392 aaPredicted RBP10.05□□□□□ -0.8
SEC23A-215ENST00000625395 DMRTA1Q5VZB9 504 aa10.05□□□□□ -0.8
SEC23A-215ENST00000625395 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
SEC23A-215ENST00000625395 NBR1Q14596 966 aa10.03□□□□□ -0.8
SEC23A-215ENST00000625395 C6orf132Q5T0Z8 1188 aa10.03□□□□□ -0.8
SEC23A-215ENST00000625395 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
SEC23A-215ENST00000625395 HRO43593 1189 aa10.02□□□□□ -0.81
SEC23A-215ENST00000625395 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
SEC23A-215ENST00000625395 OSBPP22059 807 aa10.01□□□□□ -0.81
SEC23A-215ENST00000625395 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
SEC23A-215ENST00000625395 VPS9D1Q9Y2B5 631 aa10.01□□□□□ -0.81
SEC23A-215ENST00000625395 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
SEC23A-215ENST00000625395 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
SEC23A-215ENST00000625395 MAP3K7O43318 606 aa9.98□□□□□ -0.81
SEC23A-215ENST00000625395 COL9A1P20849 921 aa9.97□□□□□ -0.81
SEC23A-215ENST00000625395 RBM33Q96EV2 1170 aaKnown RBP9.97□□□□□ -0.81
SEC23A-215ENST00000625395 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
SEC23A-215ENST00000625395 RNF166Q96A37 237 aaPredicted RBP9.95□□□□□ -0.82
SEC23A-215ENST00000625395 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
SEC23A-215ENST00000625395 MLLT3P42568 568 aaPredicted RBP9.94□□□□□ -0.82
SEC23A-215ENST00000625395 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
SEC23A-215ENST00000625395 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
SEC23A-215ENST00000625395 TSR1Q2NL82 804 aaKnown RBP9.93□□□□□ -0.82
SEC23A-215ENST00000625395 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
SEC23A-215ENST00000625395 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
SEC23A-215ENST00000625395 NBPF3Q9H094 633 aa9.93□□□□□ -0.82
SEC23A-215ENST00000625395 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
SEC23A-215ENST00000625395 SEMA3EO15041 775 aa9.92□□□□□ -0.82
SEC23A-215ENST00000625395 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
SEC23A-215ENST00000625395 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
SEC23A-215ENST00000625395 PRSS12P56730 875 aa9.89□□□□□ -0.83
SEC23A-215ENST00000625395 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
SEC23A-215ENST00000625395 MRPL50Q8N5N7 158 aaKnown RBP9.89□□□□□ -0.83
SEC23A-215ENST00000625395 PACS2Q86VP3 889 aa9.87□□□□□ -0.83
SEC23A-215ENST00000625395 CDCA7LQ96GN5 454 aa9.87□□□□□ -0.83
SEC23A-215ENST00000625395 NPDC1Q9NQX5 325 aaPredicted RBP9.87□□□□□ -0.83
SEC23A-215ENST00000625395 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
SEC23A-215ENST00000625395 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
SEC23A-215ENST00000625395 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
SEC23A-215ENST00000625395 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
SEC23A-215ENST00000625395 PTGDRQ13258 359 aa9.83□□□□□ -0.84
SEC23A-215ENST00000625395 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
SEC23A-215ENST00000625395 FAM98CQ17RN3 349 aaKnown RBP9.82□□□□□ -0.84
SEC23A-215ENST00000625395 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
SEC23A-215ENST00000625395 NBPF26B4DH59 902 aa9.81□□□□□ -0.84
SEC23A-215ENST00000625395 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
SEC23A-215ENST00000625395 FCHSD2O94868 740 aa9.8□□□□□ -0.84
SEC23A-215ENST00000625395 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
SEC23A-215ENST00000625395 WNT2BQ93097 391 aa9.79□□□□□ -0.84
SEC23A-215ENST00000625395 KCTD12Q96CX2 325 aaKnown RBP9.79□□□□□ -0.84
SEC23A-215ENST00000625395 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
SEC23A-215ENST00000625395 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
SEC23A-215ENST00000625395 ANKK1Q8NFD2 765 aa9.78□□□□□ -0.84
SEC23A-215ENST00000625395 ZFRQ96KR1 1074 aaKnown RBP9.78□□□□□ -0.84
SEC23A-215ENST00000625395 PADI6Q6TGC4 694 aa9.77□□□□□ -0.85
SEC23A-215ENST00000625395 TATDN2Q93075 761 aa9.77□□□□□ -0.85
SEC23A-215ENST00000625395 HIC1Q14526 733 aa9.76□□□□□ -0.85
SEC23A-215ENST00000625395 SOWAHBA6NEL2 793 aa9.75□□□□□ -0.85
SEC23A-215ENST00000625395 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
SEC23A-215ENST00000625395 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
SEC23A-215ENST00000625395 PNMA3Q9UL41 463 aa9.74□□□□□ -0.85
SEC23A-215ENST00000625395 NYAP1Q6ZVC0 841 aa9.73□□□□□ -0.85
SEC23A-215ENST00000625395 NUDT18Q6ZVK8 323 aa9.72□□□□□ -0.85
SEC23A-215ENST00000625395 EYA1Q99502 592 aa9.72□□□□□ -0.85
SEC23A-215ENST00000625395 GPR37O15354 613 aa9.71□□□□□ -0.86
SEC23A-215ENST00000625395 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
SEC23A-215ENST00000625395 C3orf80F5H4A9 247 aa9.7□□□□□ -0.86
SEC23A-215ENST00000625395 GNPATO15228 680 aa9.7□□□□□ -0.86
SEC23A-215ENST00000625395 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
SEC23A-215ENST00000625395 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
SEC23A-215ENST00000625395 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
SEC23A-215ENST00000625395 HDGFP51858 240 aaKnown RBP9.69□□□□□ -0.86
SEC23A-215ENST00000625395 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
SEC23A-215ENST00000625395 ADGRG1Q9Y653 693 aa9.69□□□□□ -0.86
SEC23A-215ENST00000625395 SMAPO00193 183 aa9.68□□□□□ -0.86
SEC23A-215ENST00000625395 OATP04181 439 aa9.67□□□□□ -0.86
SEC23A-215ENST00000625395 PTPN5P54829 565 aa9.67□□□□□ -0.86
SEC23A-215ENST00000625395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.67□□□□□ -0.86
SEC23A-215ENST00000625395 NECTIN2Q92692 538 aa9.67□□□□□ -0.86
SEC23A-215ENST00000625395 TSR3Q9UJK0 312 aaKnown RBP9.67□□□□□ -0.86
SEC23A-215ENST00000625395 BCAMP50895 628 aa9.66□□□□□ -0.86
SEC23A-215ENST00000625395 DNAJB2P25686 324 aa9.65□□□□□ -0.86
SEC23A-215ENST00000625395 SAMD7Q7Z3H4 446 aa9.65□□□□□ -0.86
SEC23A-215ENST00000625395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
SEC23A-215ENST00000625395 SLC4A3P48751 1232 aa9.63□□□□□ -0.87
SEC23A-215ENST00000625395 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
SEC23A-215ENST00000625395 SLF2Q8IX21 1173 aa9.63□□□□□ -0.87
SEC23A-215ENST00000625395 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
SEC23A-215ENST00000625395 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
SEC23A-215ENST00000625395 PPP4CP60510 307 aa9.61□□□□□ -0.87
SEC23A-215ENST00000625395 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
SEC23A-215ENST00000625395 WBP1LQ9NX94 342 aa9.61□□□□□ -0.87
SEC23A-215ENST00000625395 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
SEC23A-215ENST00000625395 FECHP22830 423 aa9.6□□□□□ -0.87
SEC23A-215ENST00000625395 LMOD2Q6P5Q4 547 aa9.6□□□□□ -0.87
SEC23A-215ENST00000625395 METTL3Q86U44 580 aaKnown RBP9.6□□□□□ -0.87
SEC23A-215ENST00000625395 SWT1Q5T5J6 900 aaKnown RBP9.59□□□□□ -0.87
SEC23A-215ENST00000625395 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms