RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 FBXW7Q969H0 707 aa7.76□□□□□ -1.17
CDKL5-208ENST00000624953 ADAM33Q9BZ11 813 aa7.76□□□□□ -1.17
CDKL5-208ENST00000624953 ARHGAP33O14559 1287 aa7.75□□□□□ -1.17
CDKL5-208ENST00000624953 EN1Q05925 392 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-208ENST00000624953 PPP4R3BQ5MIZ7 849 aa7.75□□□□□ -1.17
CDKL5-208ENST00000624953 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
CDKL5-208ENST00000624953 ZNF454Q8N9F8 522 aa7.74□□□□□ -1.17
CDKL5-208ENST00000624953 DDX12PQ92771 950 aa7.73□□□□□ -1.17
CDKL5-208ENST00000624953 SLC4A5Q9BY07 1137 aa7.73□□□□□ -1.17
CDKL5-208ENST00000624953 GPR37O15354 613 aa7.72□□□□□ -1.17
CDKL5-208ENST00000624953 HRO43593 1189 aa7.71□□□□□ -1.18
CDKL5-208ENST00000624953 NPDC1Q9NQX5 325 aaPredicted RBP7.71□□□□□ -1.18
CDKL5-208ENST00000624953 NBR1Q14596 966 aa7.7□□□□□ -1.18
CDKL5-208ENST00000624953 C6orf132Q5T0Z8 1188 aa7.7□□□□□ -1.18
CDKL5-208ENST00000624953 PLA2G2EQ9NZK7 142 aa7.7□□□□□ -1.18
CDKL5-208ENST00000624953 TTC13Q8NBP0 860 aa7.69□□□□□ -1.18
CDKL5-208ENST00000624953 GRXCR2A6NFK2 248 aa7.68□□□□□ -1.18
CDKL5-208ENST00000624953 PPP1R3GB7ZBB8 358 aa7.68□□□□□ -1.18
CDKL5-208ENST00000624953 TK2O00142 265 aa7.68□□□□□ -1.18
CDKL5-208ENST00000624953 KCTD12Q96CX2 325 aaKnown RBP7.68□□□□□ -1.18
CDKL5-208ENST00000624953 COL9A1P20849 921 aa7.67□□□□□ -1.18
CDKL5-208ENST00000624953 TSR1Q2NL82 804 aaKnown RBP7.67□□□□□ -1.18
CDKL5-208ENST00000624953 KCNK17Q96T54 332 aa7.67□□□□□ -1.18
CDKL5-208ENST00000624953 ZBED2Q9BTP6 218 aa7.67□□□□□ -1.18
CDKL5-208ENST00000624953 HCSTQ9UBK5 93 aa7.67□□□□□ -1.18
CDKL5-208ENST00000624953 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-208ENST00000624953 PTPREP23469 700 aa7.66□□□□□ -1.18
CDKL5-208ENST00000624953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDKL5-208ENST00000624953 PTGDRQ13258 359 aa7.65□□□□□ -1.18
CDKL5-208ENST00000624953 CDHR5Q9HBB8 845 aa7.65□□□□□ -1.18
CDKL5-208ENST00000624953 RBM27Q9P2N5 1060 aaKnown RBP7.65□□□□□ -1.18
CDKL5-208ENST00000624953 BHMG1C9JSJ3 638 aaPredicted RBP7.64□□□□□ -1.19
CDKL5-208ENST00000624953 SMYD5Q6GMV2 418 aa7.64□□□□□ -1.19
CDKL5-208ENST00000624953 RBM26Q5T8P6 1007 aaKnown RBP7.63□□□□□ -1.19
CDKL5-208ENST00000624953 CERKQ8TCT0 537 aa7.63□□□□□ -1.19
CDKL5-208ENST00000624953 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
CDKL5-208ENST00000624953 MAP3K7O43318 606 aa7.62□□□□□ -1.19
CDKL5-208ENST00000624953 FAM198AQ9UFP1 575 aa7.62□□□□□ -1.19
CDKL5-208ENST00000624953 PTPN5P54829 565 aa7.61□□□□□ -1.19
CDKL5-208ENST00000624953 RBM33Q96EV2 1170 aaKnown RBP7.61□□□□□ -1.19
CDKL5-208ENST00000624953 BCANQ96GW7 911 aa7.6□□□□□ -1.19
CDKL5-208ENST00000624953 PRSS12P56730 875 aa7.59□□□□□ -1.19
CDKL5-208ENST00000624953 TSKSQ9UJT2 592 aa7.59□□□□□ -1.19
CDKL5-208ENST00000624953 TRIM6-TRIM34B2RNG4 842 aa7.58□□□□□ -1.2
CDKL5-208ENST00000624953 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
CDKL5-208ENST00000624953 STAC3Q96MF2 364 aa7.58□□□□□ -1.2
CDKL5-208ENST00000624953 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
CDKL5-208ENST00000624953 PROX2Q3B8N5 592 aa7.57□□□□□ -1.2
CDKL5-208ENST00000624953 CDCA7LQ96GN5 454 aa7.57□□□□□ -1.2
CDKL5-208ENST00000624953 RABGEF1Q9UJ41 708 aa7.57□□□□□ -1.2
CDKL5-208ENST00000624953 FCHSD2O94868 740 aa7.56□□□□□ -1.2
CDKL5-208ENST00000624953 HIC1Q14526 733 aa7.56□□□□□ -1.2
CDKL5-208ENST00000624953 KCNH8Q96L42 1107 aa7.55□□□□□ -1.2
CDKL5-208ENST00000624953 GNPATO15228 680 aa7.53□□□□□ -1.2
CDKL5-208ENST00000624953 ZMYND10O75800 440 aa7.53□□□□□ -1.2
CDKL5-208ENST00000624953 FECHP22830 423 aa7.53□□□□□ -1.2
CDKL5-208ENST00000624953 PADI6Q6TGC4 694 aa7.53□□□□□ -1.2
CDKL5-208ENST00000624953 GPIHBP1Q8IV16 184 aa7.53□□□□□ -1.2
CDKL5-208ENST00000624953 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
CDKL5-208ENST00000624953 LAPTM4BQ86VI4 370 aa7.52□□□□□ -1.21
CDKL5-208ENST00000624953 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.21
CDKL5-208ENST00000624953 EYA1Q99502 592 aa7.52□□□□□ -1.21
CDKL5-208ENST00000624953 KIAA1468Q9P260 1216 aa7.52□□□□□ -1.21
CDKL5-208ENST00000624953 ADGRG1Q9Y653 693 aa7.52□□□□□ -1.21
CDKL5-208ENST00000624953 NUTM2FA1L443 756 aa7.51□□□□□ -1.21
CDKL5-208ENST00000624953 TULP1O00294 542 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-208ENST00000624953 BARGINQ6ZT62 677 aa7.5□□□□□ -1.21
CDKL5-208ENST00000624953 WNT2BQ93097 391 aa7.49□□□□□ -1.21
CDKL5-208ENST00000624953 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
CDKL5-208ENST00000624953 MRPL50Q8N5N7 158 aaKnown RBP7.48□□□□□ -1.21
CDKL5-208ENST00000624953 TATDN2Q93075 761 aa7.48□□□□□ -1.21
CDKL5-208ENST00000624953 NBPF3Q9H094 633 aa7.48□□□□□ -1.21
CDKL5-208ENST00000624953 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
CDKL5-208ENST00000624953 FAM98CQ17RN3 349 aaKnown RBP7.47□□□□□ -1.21
CDKL5-208ENST00000624953 PACS2Q86VP3 889 aa7.47□□□□□ -1.21
CDKL5-208ENST00000624953 PXYLP1Q8TE99 480 aa7.47□□□□□ -1.21
CDKL5-208ENST00000624953 NBPF26B4DH59 902 aa7.46□□□□□ -1.22
CDKL5-208ENST00000624953 NUDT18Q6ZVK8 323 aa7.45□□□□□ -1.22
CDKL5-208ENST00000624953 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
CDKL5-208ENST00000624953 MINK1Q8N4C8 1332 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-208ENST00000624953 IRF6O14896 467 aa7.44□□□□□ -1.22
CDKL5-208ENST00000624953 PHOX2BQ99453 314 aa7.44□□□□□ -1.22
CDKL5-208ENST00000624953 TMUB1Q9BVT8 246 aa7.44□□□□□ -1.22
CDKL5-208ENST00000624953 BCAMP50895 628 aa7.43□□□□□ -1.22
CDKL5-208ENST00000624953 ZFRQ96KR1 1074 aaKnown RBP7.43□□□□□ -1.22
CDKL5-208ENST00000624953 SEPT9Q9UHD8 586 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-208ENST00000624953 PNMA3Q9UL41 463 aa7.43□□□□□ -1.22
CDKL5-208ENST00000624953 A0A0G2JS52 829 aa7.42□□□□□ -1.22
CDKL5-208ENST00000624953 SMAPO00193 183 aa7.42□□□□□ -1.22
CDKL5-208ENST00000624953 OATP04181 439 aa7.42□□□□□ -1.22
CDKL5-208ENST00000624953 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
CDKL5-208ENST00000624953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
CDKL5-208ENST00000624953 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
CDKL5-208ENST00000624953 FAM161AQ3B820 660 aa7.41□□□□□ -1.22
CDKL5-208ENST00000624953 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
CDKL5-208ENST00000624953 IFFO2Q5TF58 517 aa7.4□□□□□ -1.22
CDKL5-208ENST00000624953 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
CDKL5-208ENST00000624953 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
CDKL5-208ENST00000624953 DNAJB2P25686 324 aa7.39□□□□□ -1.23
CDKL5-208ENST00000624953 AMHR2Q16671 573 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms