RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 CCDC70Q6NSX1 233 aa7.79□□□□□ -1.16
CDKL5-205ENST00000623535 IKQ13123 557 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-205ENST00000623535 PDS5BQ9NTI5 1447 aa7.79□□□□□ -1.16
CDKL5-205ENST00000623535 WASHC2CQ9Y4E1 1318 aa7.79□□□□□ -1.16
CDKL5-205ENST00000623535 RRP7BPQ9NSQ0 103 aa7.78□□□□□ -1.16
CDKL5-205ENST00000623535 BAZ1BQ9UIG0 1483 aaKnown RBP7.78□□□□□ -1.16
CDKL5-205ENST00000623535 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
CDKL5-205ENST00000623535 SAFB2Q14151 953 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDKL5-205ENST00000623535 ERICH2A1L162 156 aa7.78□□□□□ -1.16
CDKL5-205ENST00000623535 CREBRFQ8IUR6 639 aa7.78□□□□□ -1.16
CDKL5-205ENST00000623535 DMRT2Q9Y5R5 561 aa7.77□□□□□ -1.16
CDKL5-205ENST00000623535 MPHOSPH10O00566 681 aaKnown RBP7.77□□□□□ -1.17
CDKL5-205ENST00000623535 ANKRD20A12PQ8NF67 263 aa7.77□□□□□ -1.17
CDKL5-205ENST00000623535 SAMD1Q6SPF0 538 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-205ENST00000623535 LOC105371045A0A1W2PR82 267 aa7.77□□□□□ -1.17
CDKL5-205ENST00000623535 DRC1Q96MC2 740 aa7.77□□□□□ -1.17
CDKL5-205ENST00000623535 FRAT1Q92837 279 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-205ENST00000623535 CRBNQ96SW2 442 aa7.77□□□□□ -1.17
CDKL5-205ENST00000623535 PES1O00541 588 aaKnown RBP7.76□□□□□ -1.17
CDKL5-205ENST00000623535 RRP12Q5JTH9 1297 aaKnown RBP7.76□□□□□ -1.17
CDKL5-205ENST00000623535 KAT6BQ8WYB5 2073 aa7.76□□□□□ -1.17
CDKL5-205ENST00000623535 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
CDKL5-205ENST00000623535 SYAP1Q96A49 352 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-205ENST00000623535 TEFQ10587 303 aa7.76□□□□□ -1.17
CDKL5-205ENST00000623535 IPO7O95373 1038 aaKnown RBP7.76□□□□□ -1.17
CDKL5-205ENST00000623535 PTMSP20962 102 aa7.76□□□□□ -1.17
CDKL5-205ENST00000623535 HSCBQ8IWL3 235 aa7.76□□□□□ -1.17
CDKL5-205ENST00000623535 SLC3A2P08195 630 aaKnown RBP7.75□□□□□ -1.17
CDKL5-205ENST00000623535 TNNT3P45378 269 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-205ENST00000623535 TMOD2Q9NZR1 351 aa7.75□□□□□ -1.17
CDKL5-205ENST00000623535 TRIM29Q14134 588 aa7.75□□□□□ -1.17
CDKL5-205ENST00000623535 CYB5RLQ6IPT4 315 aa7.75□□□□□ -1.17
CDKL5-205ENST00000623535 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-205ENST00000623535 DDX58O95786 925 aaKnown RBP7.75□□□□□ -1.17
CDKL5-205ENST00000623535 ZRSR2Q15696 482 aaKnown RBP7.75□□□□□ -1.17
CDKL5-205ENST00000623535 PIP4K2BP78356 416 aa7.74□□□□□ -1.17
CDKL5-205ENST00000623535 HOOK1Q9UJC3 728 aaKnown RBP7.74□□□□□ -1.17
CDKL5-205ENST00000623535 NEBLO76041 1014 aa7.74□□□□□ -1.17
CDKL5-205ENST00000623535 SSFA2P28290 1259 aa7.74□□□□□ -1.17
CDKL5-205ENST00000623535 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
CDKL5-205ENST00000623535 EPS15P42566 896 aa7.74□□□□□ -1.17
CDKL5-205ENST00000623535 TRDNQ13061 729 aa7.74□□□□□ -1.17
CDKL5-205ENST00000623535 SF3A1Q15459 793 aaKnown RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 MPHOSPH6Q99547 160 aaKnown RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 LTV1Q96GA3 475 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 UACAQ9BZF9 1416 aa7.73□□□□□ -1.17
CDKL5-205ENST00000623535 RAPGEF4Q8WZA2 1011 aa7.73□□□□□ -1.17
CDKL5-205ENST00000623535 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 NUTM2AQ8IVF1 878 aaPredicted RBP7.73□□□□□ -1.17
CDKL5-205ENST00000623535 HSP90AB4PQ58FF6 505 aa7.72□□□□□ -1.17
CDKL5-205ENST00000623535 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
CDKL5-205ENST00000623535 CCDC112Q8NEF3 446 aa7.72□□□□□ -1.17
CDKL5-205ENST00000623535 KIF16BQ96L93 1317 aa7.72□□□□□ -1.17
CDKL5-205ENST00000623535 GNL3LQ9NVN8 582 aaKnown RBP7.72□□□□□ -1.17
CDKL5-205ENST00000623535 GRIPAP1Q4V328 841 aa7.72□□□□□ -1.17
CDKL5-205ENST00000623535 ZFYVE27Q5T4F4 411 aa7.71□□□□□ -1.17
CDKL5-205ENST00000623535 POGZQ7Z3K3 1410 aa7.71□□□□□ -1.17
CDKL5-205ENST00000623535 CDR1P51861 262 aa7.71□□□□□ -1.18
CDKL5-205ENST00000623535 ANKRD18AQ8IVF6 992 aa7.71□□□□□ -1.18
CDKL5-205ENST00000623535 TRIM6-TRIM34B2RNG4 842 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 SART3Q15020 963 aaKnown RBP7.7□□□□□ -1.18
CDKL5-205ENST00000623535 KIF6Q6ZMV9 814 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 GPRASP1Q5JY77 1395 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 FHAD1B1AJZ9 1412 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 MYO6Q9UM54 1294 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 RSPH4AQ5TD94 716 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 APPP05067 770 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 XBP1P17861 261 aa7.7□□□□□ -1.18
CDKL5-205ENST00000623535 COG3Q96JB2 828 aa7.69□□□□□ -1.18
CDKL5-205ENST00000623535 CCDC173Q0VFZ6 552 aa7.69□□□□□ -1.18
CDKL5-205ENST00000623535 ZCCHC6Q5VYS8 1495 aaKnown RBP7.69□□□□□ -1.18
CDKL5-205ENST00000623535 RBM5P52756 815 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDKL5-205ENST00000623535 HOMER2Q9NSB8 354 aa7.69□□□□□ -1.18
CDKL5-205ENST00000623535 SYCP1Q15431 976 aa7.69□□□□□ -1.18
CDKL5-205ENST00000623535 PCMTD1Q96MG8 357 aaPredicted RBP7.69□□□□□ -1.18
CDKL5-205ENST00000623535 PPP4R3AQ6IN85 833 aa7.69□□□□□ -1.18
CDKL5-205ENST00000623535 AK7Q96M32 723 aa7.69□□□□□ -1.18
CDKL5-205ENST00000623535 EEA1Q15075 1411 aa7.68□□□□□ -1.18
CDKL5-205ENST00000623535 SEPT11Q9NVA2 429 aaKnown RBP7.68□□□□□ -1.18
CDKL5-205ENST00000623535 H3BQV1 296 aa7.68□□□□□ -1.18
CDKL5-205ENST00000623535 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
CDKL5-205ENST00000623535 SETQ01105 290 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-205ENST00000623535 LRSAM1Q6UWE0 723 aa7.68□□□□□ -1.18
CDKL5-205ENST00000623535 ZBTB24O43167 697 aaPredicted RBP7.68□□□□□ -1.18
CDKL5-205ENST00000623535 SMG6Q86US8 1419 aaKnown RBP7.68□□□□□ -1.18
CDKL5-205ENST00000623535 NOC2LQ9Y3T9 749 aaKnown RBP7.68□□□□□ -1.18
CDKL5-205ENST00000623535 MYCNP04198 464 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 DDX10Q13206 875 aaKnown RBP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 FAM184AQ8NB25 1140 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 SETD5Q9C0A6 1442 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 SAFBQ15424 915 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 C9orf78Q9NZ63 289 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 U2AF1L5P0DN76 240 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 U2AF1Q01081 240 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 NBPF8Q3BBV2 869 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms