RNA–Protein interactions for RNA: ENST00000621363.1

PACRG-211, Transcript of parkin coregulated, humanhuman

TSL 5 BASIC

Gene PACRG, Length 360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-211ENST00000621363 LHX6Q9UPM6 363 aa8.4□□□□□ -1.06
PACRG-211ENST00000621363 TRIM66O15016 1216 aa8.39□□□□□ -1.07
PACRG-211ENST00000621363 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
PACRG-211ENST00000621363 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
PACRG-211ENST00000621363 IRF6O14896 467 aa8.37□□□□□ -1.07
PACRG-211ENST00000621363 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
PACRG-211ENST00000621363 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
PACRG-211ENST00000621363 CCDC102AQ96A19 550 aa8.37□□□□□ -1.07
PACRG-211ENST00000621363 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
PACRG-211ENST00000621363 MINK1Q8N4C8 1332 aaPredicted RBP8.36□□□□□ -1.07
PACRG-211ENST00000621363 SNPHO15079 494 aa8.36□□□□□ -1.07
PACRG-211ENST00000621363 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
PACRG-211ENST00000621363 C6orf132Q5T0Z8 1188 aa8.36□□□□□ -1.07
PACRG-211ENST00000621363 PDE4DQ08499 809 aa8.34□□□□□ -1.07
PACRG-211ENST00000621363 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
PACRG-211ENST00000621363 COL9A1P20849 921 aa8.31□□□□□ -1.08
PACRG-211ENST00000621363 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
PACRG-211ENST00000621363 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
PACRG-211ENST00000621363 PHOX2BQ99453 314 aa8.3□□□□□ -1.08
PACRG-211ENST00000621363 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
PACRG-211ENST00000621363 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
PACRG-211ENST00000621363 RB1CC1Q8TDY2 1594 aa8.28□□□□□ -1.08
PACRG-211ENST00000621363 ST18O60284 1047 aa8.28□□□□□ -1.08
PACRG-211ENST00000621363 AMHR2Q16671 573 aa8.28□□□□□ -1.08
PACRG-211ENST00000621363 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
PACRG-211ENST00000621363 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
PACRG-211ENST00000621363 NLRP7Q8WX94 980 aa8.27□□□□□ -1.09
PACRG-211ENST00000621363 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.09
PACRG-211ENST00000621363 PSDA5PKW4 1024 aaPredicted RBP8.26□□□□□ -1.09
PACRG-211ENST00000621363 PRSS12P56730 875 aa8.26□□□□□ -1.09
PACRG-211ENST00000621363 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
PACRG-211ENST00000621363 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
PACRG-211ENST00000621363 CERKQ8TCT0 537 aa8.26□□□□□ -1.09
PACRG-211ENST00000621363 MARVELD3Q96A59 401 aa8.26□□□□□ -1.09
PACRG-211ENST00000621363 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
PACRG-211ENST00000621363 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
PACRG-211ENST00000621363 ADGRG1Q9Y653 693 aa8.25□□□□□ -1.09
PACRG-211ENST00000621363 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
PACRG-211ENST00000621363 PTPREP23469 700 aa8.24□□□□□ -1.09
PACRG-211ENST00000621363 KCNK17Q96T54 332 aa8.24□□□□□ -1.09
PACRG-211ENST00000621363 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
PACRG-211ENST00000621363 TTLL12Q14166 644 aaPredicted RBP8.23□□□□□ -1.09
PACRG-211ENST00000621363 VARS2Q5ST30 1063 aaKnown RBP8.23□□□□□ -1.09
PACRG-211ENST00000621363 POTEEQ6S8J3 1075 aa8.23□□□□□ -1.09
PACRG-211ENST00000621363 METTL3Q86U44 580 aaKnown RBP8.23□□□□□ -1.09
PACRG-211ENST00000621363 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
PACRG-211ENST00000621363 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
PACRG-211ENST00000621363 ERBB3P21860 1342 aa8.23□□□□□ -1.09
PACRG-211ENST00000621363 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
PACRG-211ENST00000621363 PSEN2P49810 448 aa8.22□□□□□ -1.09
PACRG-211ENST00000621363 MDM2Q00987 491 aaPredicted RBP8.22□□□□□ -1.09
PACRG-211ENST00000621363 PROX2Q3B8N5 592 aa8.22□□□□□ -1.09
PACRG-211ENST00000621363 EMP3P54852 163 aa8.21□□□□□ -1.1
PACRG-211ENST00000621363 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.1
PACRG-211ENST00000621363 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
PACRG-211ENST00000621363 AXIN2Q9Y2T1 843 aa8.21□□□□□ -1.1
PACRG-211ENST00000621363 POTEB3A0JP26 581 aa8.2□□□□□ -1.1
PACRG-211ENST00000621363 MS4A1P11836 297 aa8.2□□□□□ -1.1
PACRG-211ENST00000621363 POTEBQ6S5H4 581 aa8.2□□□□□ -1.1
PACRG-211ENST00000621363 GIGYF2Q6Y7W6 1299 aaKnown RBP8.2□□□□□ -1.1
PACRG-211ENST00000621363 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
PACRG-211ENST00000621363 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
PACRG-211ENST00000621363 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
PACRG-211ENST00000621363 OATP04181 439 aa8.19□□□□□ -1.1
PACRG-211ENST00000621363 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
PACRG-211ENST00000621363 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
PACRG-211ENST00000621363 TRIM6-TRIM34B2RNG4 842 aa8.18□□□□□ -1.1
PACRG-211ENST00000621363 SMAPO00193 183 aa8.17□□□□□ -1.1
PACRG-211ENST00000621363 DMRTA1Q5VZB9 504 aa8.17□□□□□ -1.1
PACRG-211ENST00000621363 NUDT18Q6ZVK8 323 aa8.17□□□□□ -1.1
PACRG-211ENST00000621363 EYA1Q99502 592 aa8.17□□□□□ -1.1
PACRG-211ENST00000621363 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
PACRG-211ENST00000621363 NACADO15069 1562 aa8.17□□□□□ -1.1
PACRG-211ENST00000621363 CLCN1P35523 988 aa8.16□□□□□ -1.1
PACRG-211ENST00000621363 RBM46Q8TBY0 533 aaKnown RBP8.16□□□□□ -1.1
PACRG-211ENST00000621363 ZBED2Q9BTP6 218 aa8.16□□□□□ -1.1
PACRG-211ENST00000621363 RCCD1A6NED2 376 aa8.15□□□□□ -1.1
PACRG-211ENST00000621363 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
PACRG-211ENST00000621363 TATDN2Q93075 761 aa8.15□□□□□ -1.1
PACRG-211ENST00000621363 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
PACRG-211ENST00000621363 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
PACRG-211ENST00000621363 HS3ST6Q96QI5 342 aa8.14□□□□□ -1.11
PACRG-211ENST00000621363 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
PACRG-211ENST00000621363 PACS2Q86VP3 889 aa8.13□□□□□ -1.11
PACRG-211ENST00000621363 ZNF687Q8N1G0 1237 aa8.13□□□□□ -1.11
PACRG-211ENST00000621363 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
PACRG-211ENST00000621363 NBPF26B4DH59 902 aa8.12□□□□□ -1.11
PACRG-211ENST00000621363 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
PACRG-211ENST00000621363 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
PACRG-211ENST00000621363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.1□□□□□ -1.11
PACRG-211ENST00000621363 BEGAINQ9BUH8 593 aa8.1□□□□□ -1.11
PACRG-211ENST00000621363 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
PACRG-211ENST00000621363 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
PACRG-211ENST00000621363 DNAJB2P25686 324 aa8.09□□□□□ -1.11
PACRG-211ENST00000621363 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
PACRG-211ENST00000621363 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
PACRG-211ENST00000621363 PBX2P40425 430 aa8.08□□□□□ -1.12
PACRG-211ENST00000621363 TMEM134Q9H6X4 195 aa8.08□□□□□ -1.12
PACRG-211ENST00000621363 RABGEF1Q9UJ41 708 aa8.08□□□□□ -1.12
PACRG-211ENST00000621363 TIMELESSQ9UNS1 1208 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms