RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 HSP90AB3PQ58FF7 597 aa24.44■■□□□ 1.5
RAB11FIP4-211ENST00000621161 ARGLU1Q9NWB6 273 aaPredicted RBP24.44■■□□□ 1.5
RAB11FIP4-211ENST00000621161 PLCD4Q9BRC7 762 aa24.43■■□□□ 1.5
RAB11FIP4-211ENST00000621161 HOMER1Q86YM7 354 aa24.42■■□□□ 1.5
RAB11FIP4-211ENST00000621161 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
RAB11FIP4-211ENST00000621161 ITPRIPQ8IWB1 547 aa24.41■■□□□ 1.5
RAB11FIP4-211ENST00000621161 AKAP17AQ02040 695 aaKnown RBP24.41■■□□□ 1.5
RAB11FIP4-211ENST00000621161 PMFBP1Q8TBY8 1022 aa24.41■■□□□ 1.5
RAB11FIP4-211ENST00000621161 MFAP1P55081 439 aaKnown RBP24.4■■□□□ 1.5
RAB11FIP4-211ENST00000621161 HOOK1Q9UJC3 728 aaKnown RBP24.39■■□□□ 1.5
RAB11FIP4-211ENST00000621161 CT47A1Q5JQC4 288 aaPredicted RBP24.39■■□□□ 1.49
RAB11FIP4-211ENST00000621161 MYO6Q9UM54 1294 aa24.38■■□□□ 1.49
RAB11FIP4-211ENST00000621161 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
RAB11FIP4-211ENST00000621161 CCDC47Q96A33 483 aaKnown RBP24.38■■□□□ 1.49
RAB11FIP4-211ENST00000621161 ZNF330Q9Y3S2 320 aaPredicted RBP24.38■■□□□ 1.49
RAB11FIP4-211ENST00000621161 SKOR2Q2VWA4 1001 aaPredicted RBP24.37■■□□□ 1.49
RAB11FIP4-211ENST00000621161 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
RAB11FIP4-211ENST00000621161 TOMM22Q9NS69 142 aa24.37■■□□□ 1.49
RAB11FIP4-211ENST00000621161 CCDC173Q0VFZ6 552 aa24.36■■□□□ 1.49
RAB11FIP4-211ENST00000621161 FAM184AQ8NB25 1140 aa24.36■■□□□ 1.49
RAB11FIP4-211ENST00000621161 FRAT2O75474 233 aaPredicted RBP24.32■■□□□ 1.48
RAB11FIP4-211ENST00000621161 TMF1P82094 1093 aa24.32■■□□□ 1.48
RAB11FIP4-211ENST00000621161 NOL8Q76FK4 1167 aaKnown RBP24.32■■□□□ 1.48
RAB11FIP4-211ENST00000621161 FAM13BQ9NYF5 915 aa24.32■■□□□ 1.48
RAB11FIP4-211ENST00000621161 SPAG9O60271 1321 aaKnown RBP24.31■■□□□ 1.48
RAB11FIP4-211ENST00000621161 NAP1L1P55209 391 aaKnown RBP24.31■■□□□ 1.48
RAB11FIP4-211ENST00000621161 IPO9Q96P70 1041 aaKnown RBP24.31■■□□□ 1.48
RAB11FIP4-211ENST00000621161 SOX12O15370 315 aa24.3■■□□□ 1.48
RAB11FIP4-211ENST00000621161 BCCIPQ9P287 314 aaKnown RBP eCLIP24.3■■□□□ 1.48
RAB11FIP4-211ENST00000621161 STK31Q9BXU1 1019 aa24.29■■□□□ 1.48
RAB11FIP4-211ENST00000621161 MORC1Q86VD1 984 aa24.29■■□□□ 1.48
RAB11FIP4-211ENST00000621161 FHAD1B1AJZ9 1412 aa24.29■■□□□ 1.48
RAB11FIP4-211ENST00000621161 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.28■■□□□ 1.48
RAB11FIP4-211ENST00000621161 HSP90AB2PQ58FF8 381 aa24.27■■□□□ 1.48
RAB11FIP4-211ENST00000621161 SEPT11Q9NVA2 429 aaKnown RBP24.27■■□□□ 1.48
RAB11FIP4-211ENST00000621161 TAF3Q5VWG9 929 aa24.27■■□□□ 1.48
RAB11FIP4-211ENST00000621161 USP8P40818 1118 aa24.27■■□□□ 1.48
RAB11FIP4-211ENST00000621161 DDX49Q9Y6V7 483 aaKnown RBP24.27■■□□□ 1.48
RAB11FIP4-211ENST00000621161 ERCC4Q92889 916 aaPredicted RBP24.26■■□□□ 1.47
RAB11FIP4-211ENST00000621161 FOXD4L1Q9NU39 408 aa24.26■■□□□ 1.47
RAB11FIP4-211ENST00000621161 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
RAB11FIP4-211ENST00000621161 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
RAB11FIP4-211ENST00000621161 CAGE1Q8TC20 777 aa24.25■■□□□ 1.47
RAB11FIP4-211ENST00000621161 MNS1Q8NEH6 495 aa24.25■■□□□ 1.47
RAB11FIP4-211ENST00000621161 GOLGA6L7A0A1B0GV03 622 aa24.25■■□□□ 1.47
RAB11FIP4-211ENST00000621161 SYNE3Q6ZMZ3 975 aa24.25■■□□□ 1.47
RAB11FIP4-211ENST00000621161 FOXD4L5Q5VV16 416 aaPredicted RBP24.24■■□□□ 1.47
RAB11FIP4-211ENST00000621161 FOXD4L4Q8WXT5 416 aaPredicted RBP24.24■■□□□ 1.47
RAB11FIP4-211ENST00000621161 CTDP1Q9Y5B0 961 aaPredicted RBP24.24■■□□□ 1.47
RAB11FIP4-211ENST00000621161 CCDC43Q96MW1 224 aaKnown RBP24.23■■□□□ 1.47
RAB11FIP4-211ENST00000621161 TRIM29Q14134 588 aa24.23■■□□□ 1.47
RAB11FIP4-211ENST00000621161 TIMELESSQ9UNS1 1208 aa24.22■■□□□ 1.47
RAB11FIP4-211ENST00000621161 DEF6Q9H4E7 631 aa24.22■■□□□ 1.47
RAB11FIP4-211ENST00000621161 KCNH8Q96L42 1107 aa24.22■■□□□ 1.47
RAB11FIP4-211ENST00000621161 MCTP1Q6DN14 999 aa24.22■■□□□ 1.47
RAB11FIP4-211ENST00000621161 AMOTL1Q8IY63 956 aa24.22■■□□□ 1.47
RAB11FIP4-211ENST00000621161 CPLX2Q6PUV4 134 aaKnown RBP24.21■■□□□ 1.47
RAB11FIP4-211ENST00000621161 LRRFIP1Q32MZ4 808 aaKnown RBP24.2■■□□□ 1.46
RAB11FIP4-211ENST00000621161 TRIM34Q9BYJ4 488 aa24.2■■□□□ 1.46
RAB11FIP4-211ENST00000621161 EPS15P42566 896 aa24.2■■□□□ 1.46
RAB11FIP4-211ENST00000621161 RCAN3Q9UKA8 241 aa24.19■■□□□ 1.46
RAB11FIP4-211ENST00000621161 ZFYVE27Q5T4F4 411 aa24.19■■□□□ 1.46
RAB11FIP4-211ENST00000621161 LEKR1Q6ZMV7 388 aa24.19■■□□□ 1.46
RAB11FIP4-211ENST00000621161 TSPYL1Q9H0U9 437 aa24.17■■□□□ 1.46
RAB11FIP4-211ENST00000621161 R3HCC1Q9Y3T6 440 aaKnown RBP24.17■■□□□ 1.46
RAB11FIP4-211ENST00000621161 CHMP7Q8WUX9 453 aaPredicted RBP24.17■■□□□ 1.46
RAB11FIP4-211ENST00000621161 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
RAB11FIP4-211ENST00000621161 ANKRD18AQ8IVF6 992 aa24.15■■□□□ 1.46
RAB11FIP4-211ENST00000621161 KTN1Q86UP2 1357 aaKnown RBP24.15■■□□□ 1.46
RAB11FIP4-211ENST00000621161 GSE1Q14687 1217 aa24.14■■□□□ 1.46
RAB11FIP4-211ENST00000621161 DIAPH3Q9NSV4 1193 aa24.14■■□□□ 1.45
RAB11FIP4-211ENST00000621161 GIMAP7Q8NHV1 300 aa24.13■■□□□ 1.45
RAB11FIP4-211ENST00000621161 CLASRPQ8N2M8 674 aaKnown RBP24.13■■□□□ 1.45
RAB11FIP4-211ENST00000621161 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
RAB11FIP4-211ENST00000621161 NOL10Q9BSC4 688 aaKnown RBP24.13■■□□□ 1.45
RAB11FIP4-211ENST00000621161 IFT57Q9NWB7 429 aa24.12■■□□□ 1.45
RAB11FIP4-211ENST00000621161 GTF2E1P29083 439 aaPredicted RBP24.12■■□□□ 1.45
RAB11FIP4-211ENST00000621161 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
RAB11FIP4-211ENST00000621161 SMC4Q9NTJ3 1288 aa24.12■■□□□ 1.45
RAB11FIP4-211ENST00000621161 PAF1Q8N7H5 531 aa24.11■■□□□ 1.45
RAB11FIP4-211ENST00000621161 KANK1Q14678 1352 aa24.11■■□□□ 1.45
RAB11FIP4-211ENST00000621161 OFD1O75665 1012 aa24.11■■□□□ 1.45
RAB11FIP4-211ENST00000621161 SEPT7Q16181 437 aaKnown RBP24.1■■□□□ 1.45
RAB11FIP4-211ENST00000621161 KIAA0754O94854 1291 aa24.09■■□□□ 1.45
RAB11FIP4-211ENST00000621161 FAM43AQ8N2R8 423 aa24.09■■□□□ 1.45
RAB11FIP4-211ENST00000621161 SASS6Q6UVJ0 657 aa24.08■■□□□ 1.45
RAB11FIP4-211ENST00000621161 EZRP15311 586 aaKnown RBP24.08■■□□□ 1.45
RAB11FIP4-211ENST00000621161 GOLGA6L10A6NI86 522 aa24.08■■□□□ 1.45
RAB11FIP4-211ENST00000621161 FOXD4L6Q3SYB3 417 aaPredicted RBP24.08■■□□□ 1.45
RAB11FIP4-211ENST00000621161 FOXD4L3Q6VB84 417 aaPredicted RBP24.08■■□□□ 1.45
RAB11FIP4-211ENST00000621161 ERLIN2O94905 339 aa24.08■■□□□ 1.44
RAB11FIP4-211ENST00000621161 SLC4A10Q6U841 1118 aa24.07■■□□□ 1.44
RAB11FIP4-211ENST00000621161 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
RAB11FIP4-211ENST00000621161 NAT10Q9H0A0 1025 aaKnown RBP24.06■■□□□ 1.44
RAB11FIP4-211ENST00000621161 RAD21O60216 631 aa24.06■■□□□ 1.44
RAB11FIP4-211ENST00000621161 U2AF1L5P0DN76 240 aaPredicted RBP24.05■■□□□ 1.44
RAB11FIP4-211ENST00000621161 U2AF1Q01081 240 aaKnown RBP eCLIP24.05■■□□□ 1.44
RAB11FIP4-211ENST00000621161 CFDP1Q9UEE9 299 aaPredicted RBP24.05■■□□□ 1.44
RAB11FIP4-211ENST00000621161 HMGB1P09429 215 aaKnown RBP24.04■■□□□ 1.44
RAB11FIP4-211ENST00000621161 BICD2Q8TD16 824 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms