RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 CCDC173Q0VFZ6 552 aa16.29■□□□□ 0.2
COL1A2-213ENST00000620463 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
COL1A2-213ENST00000620463 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
COL1A2-213ENST00000620463 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
COL1A2-213ENST00000620463 ST18O60284 1047 aa16.28■□□□□ 0.2
COL1A2-213ENST00000620463 WIZO95785 1651 aa16.28■□□□□ 0.2
COL1A2-213ENST00000620463 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
COL1A2-213ENST00000620463 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
COL1A2-213ENST00000620463 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
COL1A2-213ENST00000620463 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
COL1A2-213ENST00000620463 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
COL1A2-213ENST00000620463 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
COL1A2-213ENST00000620463 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
COL1A2-213ENST00000620463 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.19
COL1A2-213ENST00000620463 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.19
COL1A2-213ENST00000620463 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
COL1A2-213ENST00000620463 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
COL1A2-213ENST00000620463 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
COL1A2-213ENST00000620463 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
COL1A2-213ENST00000620463 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
COL1A2-213ENST00000620463 C22orf23Q9BZE7 217 aa16.25■□□□□ 0.19
COL1A2-213ENST00000620463 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
COL1A2-213ENST00000620463 RNF214Q8ND24 703 aa16.24■□□□□ 0.19
COL1A2-213ENST00000620463 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-213ENST00000620463 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
COL1A2-213ENST00000620463 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
COL1A2-213ENST00000620463 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
COL1A2-213ENST00000620463 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
COL1A2-213ENST00000620463 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
COL1A2-213ENST00000620463 KIF16BQ96L93 1317 aa16.22■□□□□ 0.19
COL1A2-213ENST00000620463 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
COL1A2-213ENST00000620463 MCM4P33991 863 aa16.22■□□□□ 0.19
COL1A2-213ENST00000620463 GPS2Q13227 327 aa16.22■□□□□ 0.19
COL1A2-213ENST00000620463 SETQ01105 290 aaPredicted RBP16.21■□□□□ 0.19
COL1A2-213ENST00000620463 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
COL1A2-213ENST00000620463 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
COL1A2-213ENST00000620463 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
COL1A2-213ENST00000620463 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
COL1A2-213ENST00000620463 BBXQ8WY36 941 aaPredicted RBP16.2■□□□□ 0.18
COL1A2-213ENST00000620463 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
COL1A2-213ENST00000620463 CAVIN1Q6NZI2 390 aaKnown RBP16.2■□□□□ 0.18
COL1A2-213ENST00000620463 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
COL1A2-213ENST00000620463 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
COL1A2-213ENST00000620463 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
COL1A2-213ENST00000620463 PKD2Q13563 968 aa16.18■□□□□ 0.18
COL1A2-213ENST00000620463 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
COL1A2-213ENST00000620463 NUCB2P80303 420 aa16.17■□□□□ 0.18
COL1A2-213ENST00000620463 OS9Q13438 667 aaPredicted RBP16.17■□□□□ 0.18
COL1A2-213ENST00000620463 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
COL1A2-213ENST00000620463 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
COL1A2-213ENST00000620463 CCDC7Q96M83 1385 aa16.16■□□□□ 0.18
COL1A2-213ENST00000620463 GNL2Q13823 731 aaKnown RBP16.16■□□□□ 0.18
COL1A2-213ENST00000620463 CADPSQ9ULU8 1353 aa16.16■□□□□ 0.18
COL1A2-213ENST00000620463 CLCN1P35523 988 aa16.15■□□□□ 0.18
COL1A2-213ENST00000620463 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
COL1A2-213ENST00000620463 CBX1P83916 185 aa16.15■□□□□ 0.18
COL1A2-213ENST00000620463 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
COL1A2-213ENST00000620463 TAF3Q5VWG9 929 aa16.15■□□□□ 0.18
COL1A2-213ENST00000620463 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
COL1A2-213ENST00000620463 U2AF1Q01081 240 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL1A2-213ENST00000620463 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
COL1A2-213ENST00000620463 TPM4P67936 248 aa16.14■□□□□ 0.17
COL1A2-213ENST00000620463 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
COL1A2-213ENST00000620463 ANKRD45Q5TZF3 282 aa16.13■□□□□ 0.17
COL1A2-213ENST00000620463 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
COL1A2-213ENST00000620463 CGNQ9P2M7 1197 aaKnown RBP16.13■□□□□ 0.17
COL1A2-213ENST00000620463 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
COL1A2-213ENST00000620463 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
COL1A2-213ENST00000620463 E9PSI1 815 aa16.12■□□□□ 0.17
COL1A2-213ENST00000620463 MPNDQ8N594 471 aa16.12■□□□□ 0.17
COL1A2-213ENST00000620463 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
COL1A2-213ENST00000620463 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
COL1A2-213ENST00000620463 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
COL1A2-213ENST00000620463 NOC3LQ8WTT2 800 aaKnown RBP16.11■□□□□ 0.17
COL1A2-213ENST00000620463 AEBP1Q8IUX7 1158 aa16.11■□□□□ 0.17
COL1A2-213ENST00000620463 BECN2A8MW95 431 aa16.11■□□□□ 0.17
COL1A2-213ENST00000620463 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
COL1A2-213ENST00000620463 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
COL1A2-213ENST00000620463 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
COL1A2-213ENST00000620463 ARGLU1Q9NWB6 273 aaPredicted RBP16.09■□□□□ 0.17
COL1A2-213ENST00000620463 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
COL1A2-213ENST00000620463 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
COL1A2-213ENST00000620463 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
COL1A2-213ENST00000620463 APAF1O14727 1248 aa16.09■□□□□ 0.17
COL1A2-213ENST00000620463 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
COL1A2-213ENST00000620463 ZKSCAN2Q63HK3 967 aa16.08■□□□□ 0.16
COL1A2-213ENST00000620463 KIF3AQ9Y496 699 aa16.08■□□□□ 0.16
COL1A2-213ENST00000620463 XPCQ01831 940 aaPredicted RBP16.07■□□□□ 0.16
COL1A2-213ENST00000620463 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
COL1A2-213ENST00000620463 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
COL1A2-213ENST00000620463 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
COL1A2-213ENST00000620463 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
COL1A2-213ENST00000620463 WASHC2CQ9Y4E1 1318 aa16.06■□□□□ 0.16
COL1A2-213ENST00000620463 PANK1Q8TE04 598 aa16.06■□□□□ 0.16
COL1A2-213ENST00000620463 USP47Q96K76 1375 aa16.06■□□□□ 0.16
COL1A2-213ENST00000620463 PANK3Q9H999 370 aa16.06■□□□□ 0.16
COL1A2-213ENST00000620463 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
COL1A2-213ENST00000620463 SASS6Q6UVJ0 657 aa16.04■□□□□ 0.16
COL1A2-213ENST00000620463 MBD3O95983 291 aa16.04■□□□□ 0.16
COL1A2-213ENST00000620463 MNS1Q8NEH6 495 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms