RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 ZNF644Q9H582 1327 aaPredicted RBP17.91■□□□□ 0.46
CLTCL1-210ENST00000617926 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
CLTCL1-210ENST00000617926 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
CLTCL1-210ENST00000617926 PZPP20742 1482 aa17.89■□□□□ 0.45
CLTCL1-210ENST00000617926 CAMSAP2Q08AD1 1489 aa17.89■□□□□ 0.45
CLTCL1-210ENST00000617926 MAGI2Q86UL8 1455 aa17.89■□□□□ 0.45
CLTCL1-210ENST00000617926 HNRNPUQ00839 825 aaKnown RBP eCLIP17.89■□□□□ 0.45
CLTCL1-210ENST00000617926 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
CLTCL1-210ENST00000617926 KIAA1107Q9UPP5 1409 aa17.88■□□□□ 0.45
CLTCL1-210ENST00000617926 PLEKHH2Q8IVE3 1493 aa17.88■□□□□ 0.45
CLTCL1-210ENST00000617926 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
CLTCL1-210ENST00000617926 HNRNPMP52272 730 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLTCL1-210ENST00000617926 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
CLTCL1-210ENST00000617926 RBM19Q9Y4C8 960 aaKnown RBP17.87■□□□□ 0.45
CLTCL1-210ENST00000617926 DIP2CQ9Y2E4 1556 aa17.86■□□□□ 0.45
CLTCL1-210ENST00000617926 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
CLTCL1-210ENST00000617926 MLH3Q9UHC1 1453 aa17.85■□□□□ 0.45
CLTCL1-210ENST00000617926 INO80Q9ULG1 1556 aaPredicted RBP17.85■□□□□ 0.45
CLTCL1-210ENST00000617926 PRKRIP1Q9H875 184 aaPredicted RBP17.83■□□□□ 0.45
CLTCL1-210ENST00000617926 C11orf95C9JLR9 678 aaPredicted RBP17.83■□□□□ 0.44
CLTCL1-210ENST00000617926 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
CLTCL1-210ENST00000617926 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
CLTCL1-210ENST00000617926 ATP7AQ04656 1500 aa17.81■□□□□ 0.44
CLTCL1-210ENST00000617926 ATP10AO60312 1499 aa17.81■□□□□ 0.44
CLTCL1-210ENST00000617926 FOXD1Q16676 465 aa17.8■□□□□ 0.44
CLTCL1-210ENST00000617926 C9orf84Q5VXU9 1444 aa17.8■□□□□ 0.44
CLTCL1-210ENST00000617926 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
CLTCL1-210ENST00000617926 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
CLTCL1-210ENST00000617926 CCDC141Q6ZP82 1450 aa17.79■□□□□ 0.44
CLTCL1-210ENST00000617926 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
CLTCL1-210ENST00000617926 KIF7Q2M1P5 1343 aa17.78■□□□□ 0.44
CLTCL1-210ENST00000617926 REREQ9P2R6 1566 aa17.78■□□□□ 0.44
CLTCL1-210ENST00000617926 CCDC184Q52MB2 194 aa17.77■□□□□ 0.44
CLTCL1-210ENST00000617926 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.44
CLTCL1-210ENST00000617926 SHANK2Q9UPX8 1470 aa17.77■□□□□ 0.44
CLTCL1-210ENST00000617926 SPAG9O60271 1321 aaKnown RBP17.77■□□□□ 0.44
CLTCL1-210ENST00000617926 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
CLTCL1-210ENST00000617926 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
CLTCL1-210ENST00000617926 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
CLTCL1-210ENST00000617926 ARID4BQ4LE39 1312 aaPredicted RBP17.75■□□□□ 0.43
CLTCL1-210ENST00000617926 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
CLTCL1-210ENST00000617926 DHX29Q7Z478 1369 aaKnown RBP17.73■□□□□ 0.43
CLTCL1-210ENST00000617926 PLXNC1O60486 1568 aa17.73■□□□□ 0.43
CLTCL1-210ENST00000617926 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
CLTCL1-210ENST00000617926 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 FER1L4A9Z1Z3 1794 aa17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 RTEL1-TNFRSF6BF6WH68 1400 aa17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.43
CLTCL1-210ENST00000617926 AGLP35573 1532 aa17.7■□□□□ 0.42
CLTCL1-210ENST00000617926 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
CLTCL1-210ENST00000617926 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
CLTCL1-210ENST00000617926 USP47Q96K76 1375 aa17.69■□□□□ 0.42
CLTCL1-210ENST00000617926 A2MP01023 1474 aa17.69■□□□□ 0.42
CLTCL1-210ENST00000617926 MLECQ14165 292 aa17.67■□□□□ 0.42
CLTCL1-210ENST00000617926 RSPH4AQ5TD94 716 aa17.67■□□□□ 0.42
CLTCL1-210ENST00000617926 SMG6Q86US8 1419 aaKnown RBP17.67■□□□□ 0.42
CLTCL1-210ENST00000617926 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
CLTCL1-210ENST00000617926 E9PCH4 1651 aa17.67■□□□□ 0.42
CLTCL1-210ENST00000617926 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
CLTCL1-210ENST00000617926 PTPRMP28827 1452 aa17.65■□□□□ 0.42
CLTCL1-210ENST00000617926 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
CLTCL1-210ENST00000617926 FAM9BQ8IZU0 186 aa17.64■□□□□ 0.42
CLTCL1-210ENST00000617926 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
CLTCL1-210ENST00000617926 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
CLTCL1-210ENST00000617926 MSH5O43196 834 aa17.62■□□□□ 0.41
CLTCL1-210ENST00000617926 PKD2Q13563 968 aa17.6■□□□□ 0.41
CLTCL1-210ENST00000617926 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
CLTCL1-210ENST00000617926 C3P01024 1663 aa17.56■□□□□ 0.4
CLTCL1-210ENST00000617926 CLTCQ00610 1675 aaKnown RBP17.56■□□□□ 0.4
CLTCL1-210ENST00000617926 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
CLTCL1-210ENST00000617926 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
CLTCL1-210ENST00000617926 DUOX2Q9NRD8 1548 aa17.55■□□□□ 0.4
CLTCL1-210ENST00000617926 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
CLTCL1-210ENST00000617926 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
CLTCL1-210ENST00000617926 RNF17Q9BXT8 1623 aaKnown RBP17.54■□□□□ 0.4
CLTCL1-210ENST00000617926 NUP155O75694 1391 aa17.54■□□□□ 0.4
CLTCL1-210ENST00000617926 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
CLTCL1-210ENST00000617926 LAMC1P11047 1609 aa17.54■□□□□ 0.4
CLTCL1-210ENST00000617926 MROH2AA6NES4 1674 aa17.53■□□□□ 0.4
CLTCL1-210ENST00000617926 UNC13BO14795 1591 aa17.53■□□□□ 0.4
CLTCL1-210ENST00000617926 MROH1Q8NDA8 1641 aa17.53■□□□□ 0.4
CLTCL1-210ENST00000617926 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
CLTCL1-210ENST00000617926 KIF3BO15066 747 aa17.52■□□□□ 0.4
CLTCL1-210ENST00000617926 GGT6Q6P531 493 aa17.52■□□□□ 0.4
CLTCL1-210ENST00000617926 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.39
CLTCL1-210ENST00000617926 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
CLTCL1-210ENST00000617926 CEBPAP49715 358 aaPredicted RBP17.5■□□□□ 0.39
CLTCL1-210ENST00000617926 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
CLTCL1-210ENST00000617926 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
CLTCL1-210ENST00000617926 ERBINQ96RT1 1412 aa17.49■□□□□ 0.39
CLTCL1-210ENST00000617926 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
CLTCL1-210ENST00000617926 DEPDC5O75140 1603 aa17.48■□□□□ 0.39
CLTCL1-210ENST00000617926 CEP152O94986 1710 aa17.47■□□□□ 0.39
CLTCL1-210ENST00000617926 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
CLTCL1-210ENST00000617926 PRDM15P57071 1507 aaPredicted RBP17.46■□□□□ 0.39
CLTCL1-210ENST00000617926 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
CLTCL1-210ENST00000617926 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms